RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 TCP10L2B9ZVM9 353 aa22.6■■□□□ 1.21
ATG4B-221ENST00000483778 GPR25O00155 361 aa22.6■■□□□ 1.21
ATG4B-221ENST00000483778 PPP1R12BO60237 982 aaPredicted RBP22.6■■□□□ 1.21
ATG4B-221ENST00000483778 MLLT1Q03111 559 aaPredicted RBP22.6■■□□□ 1.21
ATG4B-221ENST00000483778 EYA2O00167 538 aa22.59■■□□□ 1.21
ATG4B-221ENST00000483778 CACNB3P54284 484 aa22.59■■□□□ 1.21
ATG4B-221ENST00000483778 CAVIN4Q5BKX8 364 aa22.59■■□□□ 1.21
ATG4B-221ENST00000483778 TMEM39BQ9GZU3 492 aa22.59■■□□□ 1.21
ATG4B-221ENST00000483778 IGF2BP3O00425 579 aaKnown RBP eCLIP22.58■■□□□ 1.21
ATG4B-221ENST00000483778 FRAT2O75474 233 aaPredicted RBP22.58■■□□□ 1.21
ATG4B-221ENST00000483778 SREBF2Q12772 1141 aa22.58■■□□□ 1.21
ATG4B-221ENST00000483778 SOX10P56693 466 aa22.57■■□□□ 1.2
ATG4B-221ENST00000483778 IFNL1Q8IU54 200 aa22.57■■□□□ 1.2
ATG4B-221ENST00000483778 SIL1Q9H173 461 aa22.57■■□□□ 1.2
ATG4B-221ENST00000483778 PUM3Q15397 648 aaKnown RBP22.56■■□□□ 1.2
ATG4B-221ENST00000483778 CNKSR2Q8WXI2 1034 aa22.56■■□□□ 1.2
ATG4B-221ENST00000483778 MANSC4A6NHS7 340 aaPredicted RBP22.55■■□□□ 1.2
ATG4B-221ENST00000483778 IREB2P48200 963 aaKnown RBP22.55■■□□□ 1.2
ATG4B-221ENST00000483778 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.55■■□□□ 1.2
ATG4B-221ENST00000483778 PTPN18Q99952 460 aa22.55■■□□□ 1.2
ATG4B-221ENST00000483778 CFHR5Q9BXR6 569 aa22.55■■□□□ 1.2
ATG4B-221ENST00000483778 ELP3Q9H9T3 547 aa22.55■■□□□ 1.2
ATG4B-221ENST00000483778 HPS5Q9UPZ3 1129 aa22.55■■□□□ 1.2
ATG4B-221ENST00000483778 PA2G4Q9UQ80 394 aaKnown RBP22.55■■□□□ 1.2
ATG4B-221ENST00000483778 LRRFIP2Q9Y608 721 aaKnown RBP22.55■■□□□ 1.2
ATG4B-221ENST00000483778 CCER2I3L3R5 266 aa22.54■■□□□ 1.2
ATG4B-221ENST00000483778 IFIT1P09914 478 aaKnown RBP22.54■■□□□ 1.2
ATG4B-221ENST00000483778 UBTFL1P0CB47 393 aaPredicted RBP22.54■■□□□ 1.2
ATG4B-221ENST00000483778 ZBTB48P10074 688 aaPredicted RBP22.54■■□□□ 1.2
ATG4B-221ENST00000483778 RARSP54136 660 aaKnown RBP22.54■■□□□ 1.2
ATG4B-221ENST00000483778 HDLBPQ00341 1268 aaKnown RBP22.54■■□□□ 1.2
ATG4B-221ENST00000483778 APOBEC3HQ6NTF7 200 aaKnown RBP22.54■■□□□ 1.2
ATG4B-221ENST00000483778 TBC1D22AQ8WUA7 517 aa22.54■■□□□ 1.2
ATG4B-221ENST00000483778 MEIS3Q99687 375 aa22.54■■□□□ 1.2
ATG4B-221ENST00000483778 NOM1Q5C9Z4 860 aaKnown RBP22.53■■□□□ 1.2
ATG4B-221ENST00000483778 ANKRD13AQ8IZ07 590 aa22.53■■□□□ 1.2
ATG4B-221ENST00000483778 TEKT1Q969V4 418 aa22.53■■□□□ 1.2
ATG4B-221ENST00000483778 TNNQ9UQP3 1299 aa22.53■■□□□ 1.2
ATG4B-221ENST00000483778 AK9Q5TCS8 1911 aa22.53■■□□□ 1.2
ATG4B-221ENST00000483778 UNCXA6NJT0 531 aa22.52■■□□□ 1.2
ATG4B-221ENST00000483778 FKTNO75072 461 aa22.52■■□□□ 1.2
ATG4B-221ENST00000483778 SLC5A1P13866 664 aa22.52■■□□□ 1.2
ATG4B-221ENST00000483778 INHBEP58166 350 aa22.52■■□□□ 1.2
ATG4B-221ENST00000483778 TNFAIP1Q13829 316 aa22.52■■□□□ 1.2
ATG4B-221ENST00000483778 LPIN2Q92539 896 aa22.52■■□□□ 1.2
ATG4B-221ENST00000483778 ZDHHC15Q96MV8 337 aa22.52■■□□□ 1.2
ATG4B-221ENST00000483778 KIF16BQ96L93 1317 aa22.52■■□□□ 1.2
ATG4B-221ENST00000483778 CT47B1P0C2W7 299 aaPredicted RBP22.51■■□□□ 1.19
ATG4B-221ENST00000483778 CAP1Q01518 475 aa22.51■■□□□ 1.19
ATG4B-221ENST00000483778 OPTNQ96CV9 577 aa22.51■■□□□ 1.19
ATG4B-221ENST00000483778 MS4A4AQ96JQ5 239 aa22.51■■□□□ 1.19
ATG4B-221ENST00000483778 MRIQ9BWK5 157 aa22.51■■□□□ 1.19
ATG4B-221ENST00000483778 PDE4DIPQ5VU43 2346 aa22.51■■□□□ 1.19
ATG4B-221ENST00000483778 API5Q9BZZ5 524 aaKnown RBP22.5■■□□□ 1.19
ATG4B-221ENST00000483778 TESPA1A2RU30 521 aaPredicted RBP22.49■■□□□ 1.19
ATG4B-221ENST00000483778 CIAO1O76071 339 aa22.49■■□□□ 1.19
ATG4B-221ENST00000483778 ALDH1A1P00352 501 aa22.49■■□□□ 1.19
ATG4B-221ENST00000483778 ADORA1P30542 326 aa22.49■■□□□ 1.19
ATG4B-221ENST00000483778 VGLL4Q14135 290 aa22.49■■□□□ 1.19
ATG4B-221ENST00000483778 ATP2B3Q16720 1220 aa22.49■■□□□ 1.19
ATG4B-221ENST00000483778 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.49■■□□□ 1.19
ATG4B-221ENST00000483778 CEP126Q9P2H0 1117 aa22.49■■□□□ 1.19
ATG4B-221ENST00000483778 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.49■■□□□ 1.19
ATG4B-221ENST00000483778 MYH2Q9UKX2 1941 aa22.49■■□□□ 1.19
ATG4B-221ENST00000483778 PHKA1P46020 1223 aa22.48■■□□□ 1.19
ATG4B-221ENST00000483778 TNNI2P48788 182 aa22.48■■□□□ 1.19
ATG4B-221ENST00000483778 MAP3K9P80192 1104 aa22.48■■□□□ 1.19
ATG4B-221ENST00000483778 CRHR2Q13324 411 aa22.48■■□□□ 1.19
ATG4B-221ENST00000483778 DIXDC1Q155Q3 683 aa22.48■■□□□ 1.19
ATG4B-221ENST00000483778 PKN2Q16513 984 aaKnown RBP22.48■■□□□ 1.19
ATG4B-221ENST00000483778 HHIPL2Q6UWX4 724 aa22.48■■□□□ 1.19
ATG4B-221ENST00000483778 PRDX5P30044 214 aa22.47■■□□□ 1.19
ATG4B-221ENST00000483778 INTS3Q68E01 1043 aaKnown RBP22.47■■□□□ 1.19
ATG4B-221ENST00000483778 WDR66Q8TBY9 1149 aa22.47■■□□□ 1.19
ATG4B-221ENST00000483778 SUGT1Q9Y2Z0 365 aa22.47■■□□□ 1.19
ATG4B-221ENST00000483778 BCAR3O75815 825 aa22.46■■□□□ 1.19
ATG4B-221ENST00000483778 TIMM10P62072 90 aa22.46■■□□□ 1.19
ATG4B-221ENST00000483778 FBXO46Q6PJ61 603 aaPredicted RBP22.46■■□□□ 1.19
ATG4B-221ENST00000483778 BRI3BPQ8WY22 251 aa22.46■■□□□ 1.19
ATG4B-221ENST00000483778 ZKSCAN4Q969J2 545 aaPredicted RBP22.46■■□□□ 1.19
ATG4B-221ENST00000483778 COPRSQ9NQ92 184 aa22.46■■□□□ 1.19
ATG4B-221ENST00000483778 DAGLAQ9Y4D2 1042 aa22.46■■□□□ 1.19
ATG4B-221ENST00000483778 CDC42EP5Q6NZY7 148 aa22.45■■□□□ 1.18
ATG4B-221ENST00000483778 MIGA2Q7L4E1 593 aa22.45■■□□□ 1.18
ATG4B-221ENST00000483778 FAM83AQ86UY5 434 aa22.45■■□□□ 1.18
ATG4B-221ENST00000483778 FBXO3Q9UK99 471 aa22.45■■□□□ 1.18
ATG4B-221ENST00000483778 HTTP42858 3142 aa22.44■■□□□ 1.18
ATG4B-221ENST00000483778 IL15P40933 162 aaPredicted RBP22.44■■□□□ 1.18
ATG4B-221ENST00000483778 FKBP1CQ5VVH2 108 aa22.44■■□□□ 1.18
ATG4B-221ENST00000483778 OTOP1Q7RTM1 612 aa22.44■■□□□ 1.18
ATG4B-221ENST00000483778 CD99L2Q8TCZ2 262 aa22.44■■□□□ 1.18
ATG4B-221ENST00000483778 ARHGAP45Q92619 1136 aa22.44■■□□□ 1.18
ATG4B-221ENST00000483778 OTUD5Q96G74 571 aa22.44■■□□□ 1.18
ATG4B-221ENST00000483778 SNCAIPQ9Y6H5 919 aa22.44■■□□□ 1.18
ATG4B-221ENST00000483778 MAST3O60307 1309 aa22.43■■□□□ 1.18
ATG4B-221ENST00000483778 TCP10Q12799 353 aa22.43■■□□□ 1.18
ATG4B-221ENST00000483778 NFIAQ12857 509 aa22.43■■□□□ 1.18
ATG4B-221ENST00000483778 ZFPM1Q8IX07 1006 aa22.43■■□□□ 1.18
ATG4B-221ENST00000483778 TRIM17Q9Y577 477 aa22.43■■□□□ 1.18
ATG4B-221ENST00000483778 CCDC102BQ68D86 513 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms