RNA–Protein interactions for RNA: ENST00000482904.1

RHBDF1-208, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 3

Gene RHBDF1, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-208ENST00000482904 WDR66Q8TBY9 1149 aa29.15■■■□□ 2.26
RHBDF1-208ENST00000482904 TEKT1Q969V4 418 aa29.15■■■□□ 2.26
RHBDF1-208ENST00000482904 PRDM10Q9NQV6 1147 aa29.15■■■□□ 2.26
RHBDF1-208ENST00000482904 PNMA6EA0A0J9YXQ4 647 aa29.14■■■□□ 2.26
RHBDF1-208ENST00000482904 RLBP1P12271 317 aa29.14■■■□□ 2.26
RHBDF1-208ENST00000482904 SPDYE2Q495Y8 402 aa29.14■■■□□ 2.26
RHBDF1-208ENST00000482904 RASAL3Q86YV0 1011 aa29.14■■■□□ 2.26
RHBDF1-208ENST00000482904 ZIC5Q96T25 663 aa29.14■■■□□ 2.26
RHBDF1-208ENST00000482904 CA12O43570 354 aa29.13■■■□□ 2.25
RHBDF1-208ENST00000482904 TFCP2Q12800 502 aa29.13■■■□□ 2.25
RHBDF1-208ENST00000482904 TDRD3Q9H7E2 651 aaKnown RBP29.13■■■□□ 2.25
RHBDF1-208ENST00000482904 C1orf115Q9H7X2 142 aa29.13■■■□□ 2.25
RHBDF1-208ENST00000482904 ZNF70Q9UC06 446 aaPredicted RBP29.13■■■□□ 2.25
RHBDF1-208ENST00000482904 AKAP2Q9Y2D5 859 aa29.13■■■□□ 2.25
RHBDF1-208ENST00000482904 SUGT1Q9Y2Z0 365 aa29.13■■■□□ 2.25
RHBDF1-208ENST00000482904 ADORA1P30542 326 aa29.12■■■□□ 2.25
RHBDF1-208ENST00000482904 HDLBPQ00341 1268 aaKnown RBP29.12■■■□□ 2.25
RHBDF1-208ENST00000482904 TSKSQ9UJT2 592 aa29.12■■■□□ 2.25
RHBDF1-208ENST00000482904 MYH13Q9UKX3 1938 aa29.12■■■□□ 2.25
RHBDF1-208ENST00000482904 PHKA1P46020 1223 aa29.11■■■□□ 2.25
RHBDF1-208ENST00000482904 KIF23Q02241 960 aaPredicted RBP29.11■■■□□ 2.25
RHBDF1-208ENST00000482904 G3BP1Q13283 466 aaKnown RBP eCLIP29.11■■■□□ 2.25
RHBDF1-208ENST00000482904 RASA3Q14644 834 aa29.11■■■□□ 2.25
RHBDF1-208ENST00000482904 ANGEL1Q9UNK9 670 aaKnown RBP29.11■■■□□ 2.25
RHBDF1-208ENST00000482904 A0A1B0GUL7 405 aa29.1■■■□□ 2.25
RHBDF1-208ENST00000482904 SEMA3EO15041 775 aa29.1■■■□□ 2.25
RHBDF1-208ENST00000482904 SUPT20HL1Q3ZLR7 823 aa29.1■■■□□ 2.25
RHBDF1-208ENST00000482904 TMOD2Q9NZR1 351 aa29.1■■■□□ 2.25
RHBDF1-208ENST00000482904 DENND2AQ9ULE3 1009 aa29.1■■■□□ 2.25
RHBDF1-208ENST00000482904 CCDC102BQ68D86 513 aa29.09■■■□□ 2.25
RHBDF1-208ENST00000482904 SSC5DA1L4H1 1573 aa29.09■■■□□ 2.25
RHBDF1-208ENST00000482904 TCP10L2B9ZVM9 353 aa29.08■■■□□ 2.25
RHBDF1-208ENST00000482904 PPP1R12BO60237 982 aaPredicted RBP29.08■■■□□ 2.25
RHBDF1-208ENST00000482904 MS4A1P11836 297 aa29.08■■■□□ 2.25
RHBDF1-208ENST00000482904 TNNI2P48788 182 aa29.08■■■□□ 2.25
RHBDF1-208ENST00000482904 TIMM10P62072 90 aa29.08■■■□□ 2.25
RHBDF1-208ENST00000482904 OS9Q13438 667 aaPredicted RBP29.08■■■□□ 2.25
RHBDF1-208ENST00000482904 MVPQ14764 893 aaKnown RBP29.08■■■□□ 2.25
RHBDF1-208ENST00000482904 PANK1Q8TE04 598 aa29.08■■■□□ 2.25
RHBDF1-208ENST00000482904 NEUROD6Q96NK8 337 aa29.08■■■□□ 2.25
RHBDF1-208ENST00000482904 ZDHHC15Q96MV8 337 aa29.07■■■□□ 2.24
RHBDF1-208ENST00000482904 FZD1Q9UP38 647 aa29.07■■■□□ 2.24
RHBDF1-208ENST00000482904 GORABQ5T7V8 394 aa29.06■■■□□ 2.24
RHBDF1-208ENST00000482904 NBPF12Q5TAG4 269 aaPredicted RBP29.06■■■□□ 2.24
RHBDF1-208ENST00000482904 XAGE2Q96GT9 111 aa29.06■■■□□ 2.24
RHBDF1-208ENST00000482904 ZBTB7BO15156 539 aaPredicted RBP29.05■■■□□ 2.24
RHBDF1-208ENST00000482904 LDHBP07195 334 aaKnown RBP29.05■■■□□ 2.24
RHBDF1-208ENST00000482904 PRDX5P30044 214 aa29.05■■■□□ 2.24
RHBDF1-208ENST00000482904 POLA2Q14181 598 aa29.05■■■□□ 2.24
RHBDF1-208ENST00000482904 ZBTB4Q9P1Z0 1013 aaPredicted RBP29.05■■■□□ 2.24
RHBDF1-208ENST00000482904 ATP8B2P98198 1209 aa29.04■■■□□ 2.24
RHBDF1-208ENST00000482904 RASGRF1Q13972 1273 aa29.04■■■□□ 2.24
RHBDF1-208ENST00000482904 HHIPL2Q6UWX4 724 aa29.04■■■□□ 2.24
RHBDF1-208ENST00000482904 ZGPATQ8N5A5 531 aaKnown RBP29.04■■■□□ 2.24
RHBDF1-208ENST00000482904 MRIQ9BWK5 157 aa29.04■■■□□ 2.24
RHBDF1-208ENST00000482904 RCAN3Q9UKA8 241 aa29.04■■■□□ 2.24
RHBDF1-208ENST00000482904 SALL1Q9NSC2 1324 aa29.03■■■□□ 2.24
RHBDF1-208ENST00000482904 IREB2P48200 963 aaKnown RBP29.03■■■□□ 2.24
RHBDF1-208ENST00000482904 CACNB3P54284 484 aa29.03■■■□□ 2.24
RHBDF1-208ENST00000482904 MKRN3Q13064 507 aaKnown RBP29.03■■■□□ 2.24
RHBDF1-208ENST00000482904 SSH3Q8TE77 659 aa29.03■■■□□ 2.24
RHBDF1-208ENST00000482904 DIXDC1Q155Q3 683 aa29.02■■■□□ 2.24
RHBDF1-208ENST00000482904 REM2Q8IYK8 340 aaPredicted RBP29.02■■■□□ 2.24
RHBDF1-208ENST00000482904 TMEM39BQ9GZU3 492 aa29.02■■■□□ 2.24
RHBDF1-208ENST00000482904 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP29.02■■■□□ 2.24
RHBDF1-208ENST00000482904 SURF6O75683 361 aaKnown RBP29.01■■■□□ 2.23
RHBDF1-208ENST00000482904 LDLRAD1Q5T700 205 aa29.01■■■□□ 2.23
RHBDF1-208ENST00000482904 APOBEC3HQ6NTF7 200 aaKnown RBP29.01■■■□□ 2.23
RHBDF1-208ENST00000482904 CSRNP1Q96S65 589 aa29.01■■■□□ 2.23
RHBDF1-208ENST00000482904 SAGE1Q9NXZ1 904 aa29.01■■■□□ 2.23
RHBDF1-208ENST00000482904 PDS5AQ29RF7 1337 aaKnown RBP29■■■□□ 2.23
RHBDF1-208ENST00000482904 MAP3K11Q16584 847 aa29■■■□□ 2.23
RHBDF1-208ENST00000482904 ABCF2Q9UG63 623 aa29■■■□□ 2.23
RHBDF1-208ENST00000482904 DAGLAQ9Y4D2 1042 aa29■■■□□ 2.23
RHBDF1-208ENST00000482904 DZIP1Q86YF9 867 aaKnown RBP28.99■■■□□ 2.23
RHBDF1-208ENST00000482904 ZBTB22O15209 634 aa28.98■■■□□ 2.23
RHBDF1-208ENST00000482904 TRPA1O75762 1119 aa28.98■■■□□ 2.23
RHBDF1-208ENST00000482904 CAPN15O75808 1086 aa28.98■■■□□ 2.23
RHBDF1-208ENST00000482904 CDAN1Q8IWY9 1227 aa28.98■■■□□ 2.23
RHBDF1-208ENST00000482904 SLC10A4Q96EP9 437 aa28.98■■■□□ 2.23
RHBDF1-208ENST00000482904 RNF186Q9NXI6 227 aa28.98■■■□□ 2.23
RHBDF1-208ENST00000482904 CEP85Q6P2H3 762 aa28.97■■■□□ 2.23
RHBDF1-208ENST00000482904 CLMNQ96JQ2 1002 aa28.97■■■□□ 2.23
RHBDF1-208ENST00000482904 TEPSINQ96N21 525 aa28.97■■■□□ 2.23
RHBDF1-208ENST00000482904 SREBF2Q12772 1141 aa28.96■■■□□ 2.23
RHBDF1-208ENST00000482904 FKBP1CQ5VVH2 108 aa28.96■■■□□ 2.23
RHBDF1-208ENST00000482904 SPTY2D1Q68D10 685 aaPredicted RBP28.96■■■□□ 2.23
RHBDF1-208ENST00000482904 UNCXA6NJT0 531 aa28.95■■■□□ 2.22
RHBDF1-208ENST00000482904 TNNI3KQ59H18 835 aa28.95■■■□□ 2.22
RHBDF1-208ENST00000482904 SPRYD7Q5W111 196 aa28.95■■■□□ 2.22
RHBDF1-208ENST00000482904 FAM83AQ86UY5 434 aa28.95■■■□□ 2.22
RHBDF1-208ENST00000482904 ANKRD13AQ8IZ07 590 aa28.95■■■□□ 2.22
RHBDF1-208ENST00000482904 GPR108Q9NPR9 543 aa28.95■■■□□ 2.22
RHBDF1-208ENST00000482904 DDX19BQ9UMR2 479 aa28.95■■■□□ 2.22
RHBDF1-208ENST00000482904 COG6Q9Y2V7 657 aa28.95■■■□□ 2.22
RHBDF1-208ENST00000482904 FPGT-TNNI3KV9GXZ4 949 aa28.95■■■□□ 2.22
RHBDF1-208ENST00000482904 USP2O75604 605 aaPredicted RBP28.94■■■□□ 2.22
RHBDF1-208ENST00000482904 SLF2Q8IX21 1173 aa28.94■■■□□ 2.22
RHBDF1-208ENST00000482904 SPATA5Q8NB90 893 aa28.94■■■□□ 2.22
RHBDF1-208ENST00000482904 HOOK2Q96ED9 719 aa28.94■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms