RNA–Protein interactions for RNA: ENST00000482460.1

CYTH3-208, Transcript of cytohesin 3, humanhuman

TSL 3

Gene CYTH3, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3-208ENST00000482460 CSRNP1Q96S65 589 aa28.26■■■□□ 2.11
CYTH3-208ENST00000482460 ZNF70Q9UC06 446 aaPredicted RBP28.26■■■□□ 2.11
CYTH3-208ENST00000482460 SUGT1Q9Y2Z0 365 aa28.26■■■□□ 2.11
CYTH3-208ENST00000482460 GNAI2P04899 355 aa28.25■■■□□ 2.11
CYTH3-208ENST00000482460 PRKG1Q13976 671 aa28.25■■■□□ 2.11
CYTH3-208ENST00000482460 SPDYE2Q495Y8 402 aa28.25■■■□□ 2.11
CYTH3-208ENST00000482460 MRIQ9BWK5 157 aa28.25■■■□□ 2.11
CYTH3-208ENST00000482460 TDRD3Q9H7E2 651 aaKnown RBP28.25■■■□□ 2.11
CYTH3-208ENST00000482460 AKAP11Q9UKA4 1901 aa28.24■■■□□ 2.11
CYTH3-208ENST00000482460 MYH13Q9UKX3 1938 aa28.24■■■□□ 2.11
CYTH3-208ENST00000482460 TNFAIP1Q13829 316 aa28.24■■■□□ 2.11
CYTH3-208ENST00000482460 SUPT20HL1Q3ZLR7 823 aa28.24■■■□□ 2.11
CYTH3-208ENST00000482460 RASA3Q14644 834 aa28.23■■■□□ 2.11
CYTH3-208ENST00000482460 LDLRAD1Q5T700 205 aa28.23■■■□□ 2.11
CYTH3-208ENST00000482460 TMEM57Q8N5G2 664 aa28.23■■■□□ 2.11
CYTH3-208ENST00000482460 WDR66Q8TBY9 1149 aa28.23■■■□□ 2.11
CYTH3-208ENST00000482460 SAGE1Q9NXZ1 904 aa28.23■■■□□ 2.11
CYTH3-208ENST00000482460 ANGEL1Q9UNK9 670 aaKnown RBP28.23■■■□□ 2.11
CYTH3-208ENST00000482460 MAP3K11Q16584 847 aa28.22■■■□□ 2.11
CYTH3-208ENST00000482460 TEKT1Q969V4 418 aa28.22■■■□□ 2.11
CYTH3-208ENST00000482460 GNL3LQ9NVN8 582 aaKnown RBP28.22■■■□□ 2.11
CYTH3-208ENST00000482460 MAST3O60307 1309 aa28.21■■■□□ 2.11
CYTH3-208ENST00000482460 PPP1R12BO60237 982 aaPredicted RBP28.21■■■□□ 2.11
CYTH3-208ENST00000482460 NBPF12Q5TAG4 269 aaPredicted RBP28.21■■■□□ 2.11
CYTH3-208ENST00000482460 RNF186Q9NXI6 227 aa28.21■■■□□ 2.11
CYTH3-208ENST00000482460 CAPN15O75808 1086 aa28.2■■■□□ 2.1
CYTH3-208ENST00000482460 FZD1Q9UP38 647 aa28.2■■■□□ 2.1
CYTH3-208ENST00000482460 CASP8AP2Q9UKL3 1982 aa28.2■■■□□ 2.1
CYTH3-208ENST00000482460 SSC5DA1L4H1 1573 aa28.2■■■□□ 2.1
CYTH3-208ENST00000482460 TRPA1O75762 1119 aa28.19■■■□□ 2.1
CYTH3-208ENST00000482460 ZDHHC15Q96MV8 337 aa28.19■■■□□ 2.1
CYTH3-208ENST00000482460 HHIPL2Q6UWX4 724 aa28.18■■■□□ 2.1
CYTH3-208ENST00000482460 AKAP2Q9Y2D5 859 aa28.18■■■□□ 2.1
CYTH3-208ENST00000482460 UNCXA6NJT0 531 aa28.17■■■□□ 2.1
CYTH3-208ENST00000482460 TCP10L2B9ZVM9 353 aa28.17■■■□□ 2.1
CYTH3-208ENST00000482460 SEMA3EO15041 775 aa28.17■■■□□ 2.1
CYTH3-208ENST00000482460 ZBTB22O15209 634 aa28.17■■■□□ 2.1
CYTH3-208ENST00000482460 PHKA1P46020 1223 aa28.17■■■□□ 2.1
CYTH3-208ENST00000482460 TNNI2P48788 182 aa28.17■■■□□ 2.1
CYTH3-208ENST00000482460 TIMM10P62072 90 aa28.17■■■□□ 2.1
CYTH3-208ENST00000482460 FTSJ3Q8IY81 847 aaKnown RBP28.17■■■□□ 2.1
CYTH3-208ENST00000482460 DENND2AQ9ULE3 1009 aa28.17■■■□□ 2.1
CYTH3-208ENST00000482460 PNMA6EA0A0J9YXQ4 647 aa28.16■■■□□ 2.1
CYTH3-208ENST00000482460 ADORA1P30542 326 aa28.16■■■□□ 2.1
CYTH3-208ENST00000482460 TFCP2Q12800 502 aa28.16■■■□□ 2.1
CYTH3-208ENST00000482460 SLC10A4Q96EP9 437 aa28.16■■■□□ 2.1
CYTH3-208ENST00000482460 USP2O75604 605 aaPredicted RBP28.15■■■□□ 2.1
CYTH3-208ENST00000482460 IREB2P48200 963 aaKnown RBP28.15■■■□□ 2.1
CYTH3-208ENST00000482460 CCDC102BQ68D86 513 aa28.15■■■□□ 2.1
CYTH3-208ENST00000482460 APOBEC3HQ6NTF7 200 aaKnown RBP28.15■■■□□ 2.1
CYTH3-208ENST00000482460 TEPSINQ96N21 525 aa28.15■■■□□ 2.1
CYTH3-208ENST00000482460 A0A1B0GUL7 405 aa28.14■■■□□ 2.1
CYTH3-208ENST00000482460 TM4SF4P48230 202 aa28.14■■■□□ 2.1
CYTH3-208ENST00000482460 MKRN3Q13064 507 aaKnown RBP28.14■■■□□ 2.1
CYTH3-208ENST00000482460 SALL1Q9NSC2 1324 aa28.14■■■□□ 2.09
CYTH3-208ENST00000482460 SPRYD7Q5W111 196 aa28.13■■■□□ 2.09
CYTH3-208ENST00000482460 TMEM39BQ9GZU3 492 aa28.13■■■□□ 2.09
CYTH3-208ENST00000482460 TMOD2Q9NZR1 351 aa28.13■■■□□ 2.09
CYTH3-208ENST00000482460 RLBP1P12271 317 aa28.12■■■□□ 2.09
CYTH3-208ENST00000482460 PRDX5P30044 214 aa28.12■■■□□ 2.09
CYTH3-208ENST00000482460 G3BP1Q13283 466 aaKnown RBP eCLIP28.12■■■□□ 2.09
CYTH3-208ENST00000482460 FKBP1CQ5VVH2 108 aa28.12■■■□□ 2.09
CYTH3-208ENST00000482460 XAGE2Q96GT9 111 aa28.12■■■□□ 2.09
CYTH3-208ENST00000482460 CLMNQ96JQ2 1002 aa28.12■■■□□ 2.09
CYTH3-208ENST00000482460 LDHBP07195 334 aaKnown RBP28.11■■■□□ 2.09
CYTH3-208ENST00000482460 SREBF2Q12772 1141 aa28.11■■■□□ 2.09
CYTH3-208ENST00000482460 ITPRIPQ8IWB1 547 aa28.11■■■□□ 2.09
CYTH3-208ENST00000482460 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.11■■■□□ 2.09
CYTH3-208ENST00000482460 ZBTB7BO15156 539 aaPredicted RBP28.1■■■□□ 2.09
CYTH3-208ENST00000482460 CACNB3P54284 484 aa28.1■■■□□ 2.09
CYTH3-208ENST00000482460 ATP8B2P98198 1209 aa28.1■■■□□ 2.09
CYTH3-208ENST00000482460 POLA2Q14181 598 aa28.1■■■□□ 2.09
CYTH3-208ENST00000482460 MVPQ14764 893 aaKnown RBP28.1■■■□□ 2.09
CYTH3-208ENST00000482460 FAM83AQ86UY5 434 aa28.1■■■□□ 2.09
CYTH3-208ENST00000482460 CDAN1Q8IWY9 1227 aa28.1■■■□□ 2.09
CYTH3-208ENST00000482460 ANKRD13AQ8IZ07 590 aa28.1■■■□□ 2.09
CYTH3-208ENST00000482460 ZBTB48P10074 688 aaPredicted RBP28.09■■■□□ 2.09
CYTH3-208ENST00000482460 ZGPATQ8N5A5 531 aaKnown RBP28.09■■■□□ 2.09
CYTH3-208ENST00000482460 ABHD8Q96I13 439 aa28.09■■■□□ 2.09
CYTH3-208ENST00000482460 NEUROD6Q96NK8 337 aa28.09■■■□□ 2.09
CYTH3-208ENST00000482460 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.09■■■□□ 2.09
CYTH3-208ENST00000482460 DAGLAQ9Y4D2 1042 aa28.09■■■□□ 2.09
CYTH3-208ENST00000482460 RASGRF1Q13972 1273 aa28.08■■■□□ 2.09
CYTH3-208ENST00000482460 DIXDC1Q155Q3 683 aa28.08■■■□□ 2.09
CYTH3-208ENST00000482460 SSH3Q8TE77 659 aa28.08■■■□□ 2.09
CYTH3-208ENST00000482460 WNK4Q96J92 1243 aa28.08■■■□□ 2.09
CYTH3-208ENST00000482460 PDS5AQ29RF7 1337 aaKnown RBP28.08■■■□□ 2.09
CYTH3-208ENST00000482460 INHBEP58166 350 aa28.07■■■□□ 2.08
CYTH3-208ENST00000482460 MANSC4A6NHS7 340 aaPredicted RBP28.06■■■□□ 2.08
CYTH3-208ENST00000482460 C1orf115Q9H7X2 142 aa28.06■■■□□ 2.08
CYTH3-208ENST00000482460 MCOLN1Q9GZU1 580 aa28.05■■■□□ 2.08
CYTH3-208ENST00000482460 DGKZQ13574 1117 aa28.04■■■□□ 2.08
CYTH3-208ENST00000482460 GORABQ5T7V8 394 aa28.04■■■□□ 2.08
CYTH3-208ENST00000482460 CDC42EP5Q6NZY7 148 aa28.04■■■□□ 2.08
CYTH3-208ENST00000482460 HOOK2Q96ED9 719 aa28.04■■■□□ 2.08
CYTH3-208ENST00000482460 OTOFQ9HC10 1997 aa28.04■■■□□ 2.08
CYTH3-208ENST00000482460 MYH2Q9UKX2 1941 aa28.03■■■□□ 2.08
CYTH3-208ENST00000482460 TBC1D8O95759 1140 aa28.03■■■□□ 2.08
CYTH3-208ENST00000482460 MAP3K9P80192 1104 aa28.03■■■□□ 2.08
CYTH3-208ENST00000482460 SPTY2D1Q68D10 685 aaPredicted RBP28.03■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms