RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 ATP8B2P98198 1209 aa11.25□□□□□ -0.61
VCP-206ENST00000480327 LDHAL6AQ6ZMR3 332 aa11.25□□□□□ -0.61
VCP-206ENST00000480327 APOBEC3FQ8IUX4 373 aaKnown RBP11.25□□□□□ -0.61
VCP-206ENST00000480327 MTMR14Q8NCE2 650 aa11.25□□□□□ -0.61
VCP-206ENST00000480327 EXOC6Q8TAG9 804 aa11.25□□□□□ -0.61
VCP-206ENST00000480327 CLMNQ96JQ2 1002 aa11.25□□□□□ -0.61
VCP-206ENST00000480327 CHMP4BQ9H444 224 aaKnown RBP11.25□□□□□ -0.61
VCP-206ENST00000480327 ANGEL1Q9UNK9 670 aaKnown RBP11.25□□□□□ -0.61
VCP-206ENST00000480327 IL1R1P14778 569 aa11.24□□□□□ -0.61
VCP-206ENST00000480327 GJA5P36382 358 aa11.24□□□□□ -0.61
VCP-206ENST00000480327 MMP14P50281 582 aa11.24□□□□□ -0.61
VCP-206ENST00000480327 CAP1Q01518 475 aa11.24□□□□□ -0.61
VCP-206ENST00000480327 MAP3K11Q16584 847 aa11.24□□□□□ -0.61
VCP-206ENST00000480327 LRRC24Q50LG9 513 aa11.24□□□□□ -0.61
VCP-206ENST00000480327 CEP85Q6P2H3 762 aa11.24□□□□□ -0.61
VCP-206ENST00000480327 PRMT6Q96LA8 375 aaPredicted RBP11.24□□□□□ -0.61
VCP-206ENST00000480327 DEFB129Q9H1M3 183 aa11.24□□□□□ -0.61
VCP-206ENST00000480327 JAG2Q9Y219 1238 aa11.24□□□□□ -0.61
VCP-206ENST00000480327 MYH13Q9UKX3 1938 aa11.23□□□□□ -0.61
VCP-206ENST00000480327 IGF2BP3O00425 579 aaKnown RBP eCLIP11.23□□□□□ -0.61
VCP-206ENST00000480327 NF2P35240 595 aa11.23□□□□□ -0.61
VCP-206ENST00000480327 MTX1Q13505 466 aa11.23□□□□□ -0.61
VCP-206ENST00000480327 PKN2Q16513 984 aaKnown RBP11.23□□□□□ -0.61
VCP-206ENST00000480327 HDAC9Q9UKV0 1011 aa11.23□□□□□ -0.61
VCP-206ENST00000480327 CLRN2A0PK11 232 aa11.22□□□□□ -0.61
VCP-206ENST00000480327 SPDYE2BA6NHP3 402 aa11.22□□□□□ -0.61
VCP-206ENST00000480327 F8W031 263 aaPredicted RBP11.22□□□□□ -0.61
VCP-206ENST00000480327 SPDYE6P0CI01 402 aa11.22□□□□□ -0.61
VCP-206ENST00000480327 KCNJ4P48050 445 aa11.22□□□□□ -0.61
VCP-206ENST00000480327 DLGAP5Q15398 846 aa11.22□□□□□ -0.61
VCP-206ENST00000480327 CFAP100Q494V2 611 aa11.22□□□□□ -0.61
VCP-206ENST00000480327 NBPF12Q5TAG4 269 aaPredicted RBP11.22□□□□□ -0.61
VCP-206ENST00000480327 FBXO46Q6PJ61 603 aaPredicted RBP11.22□□□□□ -0.61
VCP-206ENST00000480327 ARMC9Q7Z3E5 817 aa11.22□□□□□ -0.61
VCP-206ENST00000480327 CDAN1Q8IWY9 1227 aa11.22□□□□□ -0.61
VCP-206ENST00000480327 WNK4Q96J92 1243 aa11.22□□□□□ -0.61
VCP-206ENST00000480327 KIAA0100Q14667 2235 aaKnown RBP11.21□□□□□ -0.61
VCP-206ENST00000480327 EYA2O00167 538 aa11.21□□□□□ -0.61
VCP-206ENST00000480327 FKTNO75072 461 aa11.21□□□□□ -0.61
VCP-206ENST00000480327 USP2O75604 605 aaPredicted RBP11.21□□□□□ -0.61
VCP-206ENST00000480327 FKBP1AP62942 108 aaKnown RBP11.21□□□□□ -0.61
VCP-206ENST00000480327 SREBF2Q12772 1141 aa11.21□□□□□ -0.61
VCP-206ENST00000480327 POLA2Q14181 598 aa11.21□□□□□ -0.61
VCP-206ENST00000480327 METTL24Q5JXM2 366 aa11.21□□□□□ -0.61
VCP-206ENST00000480327 IFNL1Q8IU54 200 aa11.21□□□□□ -0.61
VCP-206ENST00000480327 SIRT2Q8IXJ6 389 aa11.21□□□□□ -0.61
VCP-206ENST00000480327 RPAP2Q8IXW5 612 aaPredicted RBP11.21□□□□□ -0.61
VCP-206ENST00000480327 SSH3Q8TE77 659 aa11.21□□□□□ -0.61
VCP-206ENST00000480327 COPRSQ9NQ92 184 aa11.21□□□□□ -0.61
VCP-206ENST00000480327 RIPOR2Q9Y4F9 1068 aa11.21□□□□□ -0.61
VCP-206ENST00000480327 PCDHB15Q9Y5E8 787 aa11.21□□□□□ -0.61
VCP-206ENST00000480327 FAM205AQ6ZU69 1335 aa11.2□□□□□ -0.62
VCP-206ENST00000480327 APBB1O00213 710 aa11.2□□□□□ -0.62
VCP-206ENST00000480327 SURF6O75683 361 aaKnown RBP11.2□□□□□ -0.62
VCP-206ENST00000480327 G3BP1Q13283 466 aaKnown RBP eCLIP11.2□□□□□ -0.626e-8■■■□□ 15.8
VCP-206ENST00000480327 OS9Q13438 667 aaPredicted RBP11.2□□□□□ -0.62
VCP-206ENST00000480327 GRIK5Q16478 980 aa11.2□□□□□ -0.62
VCP-206ENST00000480327 PRPF38BQ5VTL8 546 aaKnown RBP11.2□□□□□ -0.62
VCP-206ENST00000480327 ATG9AQ7Z3C6 839 aa11.2□□□□□ -0.62
VCP-206ENST00000480327 TEPSINQ96N21 525 aa11.2□□□□□ -0.62
VCP-206ENST00000480327 PTPN18Q99952 460 aa11.2□□□□□ -0.62
VCP-206ENST00000480327 BCL11AQ9H165 835 aa11.2□□□□□ -0.62
VCP-206ENST00000480327 PPP2R3BQ9Y5P8 575 aa11.2□□□□□ -0.62
VCP-206ENST00000480327 MROH5Q6ZUA9 1318 aa11.19□□□□□ -0.62
VCP-206ENST00000480327 MANSC4A6NHS7 340 aaPredicted RBP11.19□□□□□ -0.62
VCP-206ENST00000480327 HMMRO75330 724 aa11.19□□□□□ -0.62
VCP-206ENST00000480327 ZBTB48P10074 688 aaPredicted RBP11.19□□□□□ -0.62
VCP-206ENST00000480327 GYG1P46976 350 aa11.19□□□□□ -0.62
VCP-206ENST00000480327 RASA3Q14644 834 aa11.19□□□□□ -0.62
VCP-206ENST00000480327 OTOP1Q7RTM1 612 aa11.19□□□□□ -0.62
VCP-206ENST00000480327 ZNF804AQ7Z570 1209 aa11.19□□□□□ -0.62
VCP-206ENST00000480327 TDRD7Q8NHU6 1098 aaKnown RBP11.19□□□□□ -0.62
VCP-206ENST00000480327 SLC10A4Q96EP9 437 aa11.19□□□□□ -0.62
VCP-206ENST00000480327 FAM84BQ96KN1 310 aaPredicted RBP11.19□□□□□ -0.62
VCP-206ENST00000480327 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.19□□□□□ -0.62
VCP-206ENST00000480327 EXOC6BQ9Y2D4 811 aa11.19□□□□□ -0.62
VCP-206ENST00000480327 TESPA1A2RU30 521 aaPredicted RBP11.18□□□□□ -0.62
VCP-206ENST00000480327 POTEFA5A3E0 1075 aa11.18□□□□□ -0.62
VCP-206ENST00000480327 CIAO1O76071 339 aa11.18□□□□□ -0.62
VCP-206ENST00000480327 IL15P40933 162 aaPredicted RBP11.18□□□□□ -0.62
VCP-206ENST00000480327 TFCP2Q12800 502 aa11.18□□□□□ -0.62
VCP-206ENST00000480327 SPDYE2Q495Y8 402 aa11.18□□□□□ -0.62
VCP-206ENST00000480327 CNKSR2Q8WXI2 1034 aa11.18□□□□□ -0.62
VCP-206ENST00000480327 VEZTQ9HBM0 779 aa11.18□□□□□ -0.62
VCP-206ENST00000480327 CEP126Q9P2H0 1117 aa11.18□□□□□ -0.62
VCP-206ENST00000480327 ZNF70Q9UC06 446 aaPredicted RBP11.18□□□□□ -0.62
VCP-206ENST00000480327 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.18□□□□□ -0.62
VCP-206ENST00000480327 PPP1R12BO60237 982 aaPredicted RBP11.17□□□□□ -0.62
VCP-206ENST00000480327 PDE8BO95263 885 aa11.17□□□□□ -0.62
VCP-206ENST00000480327 ALDH1A1P00352 501 aa11.17□□□□□ -0.62
VCP-206ENST00000480327 INHBEP58166 350 aa11.17□□□□□ -0.62
VCP-206ENST00000480327 CRHR2Q13324 411 aa11.17□□□□□ -0.62
VCP-206ENST00000480327 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.17□□□□□ -0.62
VCP-206ENST00000480327 VGLL2Q8N8G2 317 aa11.17□□□□□ -0.62
VCP-206ENST00000480327 MS4A4AQ96JQ5 239 aa11.17□□□□□ -0.62
VCP-206ENST00000480327 TDRD3Q9H7E2 651 aaKnown RBP11.17□□□□□ -0.62
VCP-206ENST00000480327 FBXO3Q9UK99 471 aa11.17□□□□□ -0.62
VCP-206ENST00000480327 TRIM17Q9Y577 477 aa11.17□□□□□ -0.62
VCP-206ENST00000480327 UNCXA6NJT0 531 aa11.16□□□□□ -0.62
VCP-206ENST00000480327 NEFLP07196 543 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms