RNA–Protein interactions for RNA: ENST00000480179.1

PKNOX1-206, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 1,725 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-206ENST00000480179 TM4SF1P30408 202 aa17.26■□□□□ 0.35
PKNOX1-206ENST00000480179 CAVIN4Q5BKX8 364 aa17.26■□□□□ 0.35
PKNOX1-206ENST00000480179 PRR5LQ6MZQ0 368 aa17.26■□□□□ 0.35
PKNOX1-206ENST00000480179 DHX32Q7L7V1 743 aaKnown RBP17.26■□□□□ 0.35
PKNOX1-206ENST00000480179 VPS37DQ86XT2 251 aa17.26■□□□□ 0.35
PKNOX1-206ENST00000480179 AIDAQ96BJ3 306 aa17.26■□□□□ 0.35
PKNOX1-206ENST00000480179 MBD4O95243 580 aa17.25■□□□□ 0.35
PKNOX1-206ENST00000480179 APPP05067 770 aa17.25■□□□□ 0.35
PKNOX1-206ENST00000480179 BRF1Q92994 677 aa17.25■□□□□ 0.35
PKNOX1-206ENST00000480179 ANKRD2Q9GZV1 360 aa17.25■□□□□ 0.35
PKNOX1-206ENST00000480179 LRP2BPQ9P2M1 347 aa17.25■□□□□ 0.35
PKNOX1-206ENST00000480179 GPBP1L1Q9HC44 474 aaPredicted RBP17.24■□□□□ 0.35
PKNOX1-206ENST00000480179 SYT1P21579 422 aa17.24■□□□□ 0.35
PKNOX1-206ENST00000480179 ST5P78524 1137 aa17.24■□□□□ 0.35
PKNOX1-206ENST00000480179 CHST3Q7LGC8 479 aa17.24■□□□□ 0.35
PKNOX1-206ENST00000480179 SLC51AQ86UW1 340 aa17.24■□□□□ 0.35
PKNOX1-206ENST00000480179 NLGN1Q8N2Q7 840 aa17.24■□□□□ 0.35
PKNOX1-206ENST00000480179 FAM84BQ96KN1 310 aaPredicted RBP17.24■□□□□ 0.35
PKNOX1-206ENST00000480179 ARMT1Q9H993 441 aa17.24■□□□□ 0.35
PKNOX1-206ENST00000480179 ZNF213O14771 459 aa17.23■□□□□ 0.35
PKNOX1-206ENST00000480179 STX6O43752 255 aa17.23■□□□□ 0.35
PKNOX1-206ENST00000480179 SERPINB2P05120 415 aa17.23■□□□□ 0.35
PKNOX1-206ENST00000480179 MMP10P09238 476 aa17.23■□□□□ 0.35
PKNOX1-206ENST00000480179 EXOSC10Q01780 885 aaKnown RBP17.23■□□□□ 0.35
PKNOX1-206ENST00000480179 GRAPQ13588 217 aa17.23■□□□□ 0.35
PKNOX1-206ENST00000480179 SKOR2Q2VWA4 1001 aaPredicted RBP17.23■□□□□ 0.35
PKNOX1-206ENST00000480179 FOXD4L6Q3SYB3 417 aaPredicted RBP17.23■□□□□ 0.35
PKNOX1-206ENST00000480179 FOXD4L3Q6VB84 417 aaPredicted RBP17.23■□□□□ 0.35
PKNOX1-206ENST00000480179 GRAPLQ8TC17 118 aaPredicted RBP17.23■□□□□ 0.35
PKNOX1-206ENST00000480179 RPGRQ92834 1020 aaKnown RBP17.23■□□□□ 0.35
PKNOX1-206ENST00000480179 STRBPQ96SI9 672 aaKnown RBP17.23■□□□□ 0.35
PKNOX1-206ENST00000480179 ABCF2Q9UG63 623 aa17.23■□□□□ 0.35
PKNOX1-206ENST00000480179 ZSCAN22P10073 491 aaPredicted RBP17.22■□□□□ 0.35
PKNOX1-206ENST00000480179 DDR1Q08345 913 aa17.22■□□□□ 0.35
PKNOX1-206ENST00000480179 APOBRQ0VD83 1088 aa17.22■□□□□ 0.35
PKNOX1-206ENST00000480179 GTF3C6Q969F1 213 aa17.22■□□□□ 0.35
PKNOX1-206ENST00000480179 RAI14Q9P0K7 980 aa17.22■□□□□ 0.35
PKNOX1-206ENST00000480179 FBXO33Q7Z6M2 555 aa17.21■□□□□ 0.35
PKNOX1-206ENST00000480179 LCORLQ8N3X6 602 aa17.21■□□□□ 0.35
PKNOX1-206ENST00000480179 LMBRD1Q9NUN5 540 aa17.21■□□□□ 0.35
PKNOX1-206ENST00000480179 DENND2AQ9ULE3 1009 aa17.21■□□□□ 0.35
PKNOX1-206ENST00000480179 NAP1L2Q9ULW6 460 aaPredicted RBP17.21■□□□□ 0.35
PKNOX1-206ENST00000480179 VPS37CA5D8V6 355 aaPredicted RBP17.21■□□□□ 0.35
PKNOX1-206ENST00000480179 CYP7A1P22680 504 aa17.21■□□□□ 0.35
PKNOX1-206ENST00000480179 RALYLQ86SE5 291 aaKnown RBP17.21■□□□□ 0.35
PKNOX1-206ENST00000480179 TBC1D10CQ8IV04 446 aa17.21■□□□□ 0.35
PKNOX1-206ENST00000480179 MIGA1Q8NAN2 632 aa17.21■□□□□ 0.35
PKNOX1-206ENST00000480179 NBPF3Q9H094 633 aa17.21■□□□□ 0.35
PKNOX1-206ENST00000480179 PRPF40AO75400 957 aaKnown RBP17.2■□□□□ 0.34
PKNOX1-206ENST00000480179 HIBADHP31937 336 aaKnown RBP17.2■□□□□ 0.34
PKNOX1-206ENST00000480179 EPB41L4AQ9HCS5 686 aaPredicted RBP17.2■□□□□ 0.34
PKNOX1-206ENST00000480179 ANKIB1Q9P2G1 1089 aa17.2■□□□□ 0.34
PKNOX1-206ENST00000480179 DDX49Q9Y6V7 483 aaKnown RBP17.2■□□□□ 0.34
PKNOX1-206ENST00000480179 CACNA1SQ13698 1873 aa17.19■□□□□ 0.34
PKNOX1-206ENST00000480179 POLRMTO00411 1230 aaKnown RBP17.19■□□□□ 0.34
PKNOX1-206ENST00000480179 PRC1O43663 620 aa17.19■□□□□ 0.34
PKNOX1-206ENST00000480179 PRKAB2O43741 272 aa17.19■□□□□ 0.34
PKNOX1-206ENST00000480179 CHAF1AQ13111 956 aaPredicted RBP17.19■□□□□ 0.34
PKNOX1-206ENST00000480179 MB21D2Q8IYB1 491 aaPredicted RBP17.19■□□□□ 0.34
PKNOX1-206ENST00000480179 NCOA7Q8NI08 942 aa17.19■□□□□ 0.34
PKNOX1-206ENST00000480179 ZNF526Q8TF50 670 aaPredicted RBP17.19■□□□□ 0.34
PKNOX1-206ENST00000480179 GPHNQ9NQX3 736 aaPredicted RBP17.19■□□□□ 0.34
PKNOX1-206ENST00000480179 MTMR6Q9Y217 621 aa17.19■□□□□ 0.34
PKNOX1-206ENST00000480179 MAST2Q6P0Q8 1798 aa17.19■□□□□ 0.34
PKNOX1-206ENST00000480179 SEMA3EO15041 775 aa17.18■□□□□ 0.34
PKNOX1-206ENST00000480179 JAK2O60674 1132 aa17.18■□□□□ 0.34
PKNOX1-206ENST00000480179 PFKFB2O60825 505 aa17.18■□□□□ 0.34
PKNOX1-206ENST00000480179 F13A1P00488 732 aa17.18■□□□□ 0.34
PKNOX1-206ENST00000480179 TGFB2P61812 414 aa17.18■□□□□ 0.34
PKNOX1-206ENST00000480179 ADGRA1Q86SQ6 560 aa17.18■□□□□ 0.34
PKNOX1-206ENST00000480179 AGXT2Q9BYV1 514 aa17.18■□□□□ 0.34
PKNOX1-206ENST00000480179 NAPBQ9H115 298 aa17.18■□□□□ 0.34
PKNOX1-206ENST00000480179 SLC4A4Q9Y6R1 1079 aa17.18■□□□□ 0.34
PKNOX1-206ENST00000480179 PATL2C9JE40 543 aaKnown RBP17.18■□□□□ 0.34
PKNOX1-206ENST00000480179 NCLP19338 710 aaKnown RBP17.18■□□□□ 0.34
PKNOX1-206ENST00000480179 MCM5P33992 734 aa17.18■□□□□ 0.34
PKNOX1-206ENST00000480179 SCRN1Q12765 414 aa17.18■□□□□ 0.34
PKNOX1-206ENST00000480179 ALX1Q15699 326 aa17.18■□□□□ 0.34
PKNOX1-206ENST00000480179 LARP1BQ659C4 914 aaKnown RBP17.18■□□□□ 0.34
PKNOX1-206ENST00000480179 IFNL3Q8IZI9 196 aa17.18■□□□□ 0.34
PKNOX1-206ENST00000480179 RBM17Q96I25 401 aaKnown RBP17.18■□□□□ 0.34
PKNOX1-206ENST00000480179 ZMYM6O95789 1325 aa17.18■□□□□ 0.34
PKNOX1-206ENST00000480179 TIAM2Q8IVF5 1701 aa17.18■□□□□ 0.34
PKNOX1-206ENST00000480179 GSG1L2A8MUP6 293 aa17.17■□□□□ 0.34
PKNOX1-206ENST00000480179 TDO2P48775 406 aa17.17■□□□□ 0.34
PKNOX1-206ENST00000480179 ANTXR2P58335 489 aa17.17■□□□□ 0.34
PKNOX1-206ENST00000480179 KLHL40Q2TBA0 621 aa17.17■□□□□ 0.34
PKNOX1-206ENST00000480179 CRY2Q49AN0 593 aa17.17■□□□□ 0.34
PKNOX1-206ENST00000480179 TXNRD3Q86VQ6 643 aa17.17■□□□□ 0.34
PKNOX1-206ENST00000480179 PARP3Q9Y6F1 533 aa17.17■□□□□ 0.34
PKNOX1-206ENST00000480179 MAGEB6P1A0A0J9YX57 407 aa17.16■□□□□ 0.34
PKNOX1-206ENST00000480179 GNAT2P19087 354 aa17.16■□□□□ 0.34
PKNOX1-206ENST00000480179 CCT2P78371 535 aaKnown RBP17.16■□□□□ 0.34
PKNOX1-206ENST00000480179 TRDNQ13061 729 aa17.16■□□□□ 0.34
PKNOX1-206ENST00000480179 NAA16Q6N069 864 aaPredicted RBP17.16■□□□□ 0.34
PKNOX1-206ENST00000480179 GPR101Q96P66 508 aaPredicted RBP17.16■□□□□ 0.34
PKNOX1-206ENST00000480179 JAG2Q9Y219 1238 aa17.16■□□□□ 0.34
PKNOX1-206ENST00000480179 XDHP47989 1333 aa17.16■□□□□ 0.34
PKNOX1-206ENST00000480179 IRS2Q9Y4H2 1338 aa17.16■□□□□ 0.34
PKNOX1-206ENST00000480179 ANKRD31Q8N7Z5 1873 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms