RNA–Protein interactions for RNA: ENST00000479712.1

UPF3A-205, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-205ENST00000479712 GPLD1P80108 840 aa8.12□□□□□ -1.11
UPF3A-205ENST00000479712 GNL2Q13823 731 aaKnown RBP8.12□□□□□ -1.11
UPF3A-205ENST00000479712 SV2AQ7L0J3 742 aa8.12□□□□□ -1.11
UPF3A-205ENST00000479712 CCNJLQ8IV13 435 aa8.12□□□□□ -1.11
UPF3A-205ENST00000479712 VWA5B2Q8N398 1253 aa8.12□□□□□ -1.11
UPF3A-205ENST00000479712 CEP120Q8N960 986 aa8.12□□□□□ -1.11
UPF3A-205ENST00000479712 TRPM4Q8TD43 1214 aa8.12□□□□□ -1.11
UPF3A-205ENST00000479712 IGFLR1Q9H665 355 aa8.12□□□□□ -1.11
UPF3A-205ENST00000479712 DZANK1Q9NVP4 752 aa8.12□□□□□ -1.11
UPF3A-205ENST00000479712 PPM1HQ9ULR3 514 aa8.12□□□□□ -1.11
UPF3A-205ENST00000479712 AKAP2Q9Y2D5 859 aa8.12□□□□□ -1.11
UPF3A-205ENST00000479712 FAM181BA6NEQ2 426 aa8.11□□□□□ -1.11
UPF3A-205ENST00000479712 TRPA1O75762 1119 aa8.11□□□□□ -1.11
UPF3A-205ENST00000479712 TNNI2P48788 182 aa8.11□□□□□ -1.11
UPF3A-205ENST00000479712 MLLT1Q03111 559 aaPredicted RBP8.11□□□□□ -1.11
UPF3A-205ENST00000479712 TBC1D8BQ0IIM8 1120 aa8.11□□□□□ -1.11
UPF3A-205ENST00000479712 CCDC85BQ15834 202 aaPredicted RBP8.11□□□□□ -1.11
UPF3A-205ENST00000479712 ERMP1Q7Z2K6 904 aa8.11□□□□□ -1.11
UPF3A-205ENST00000479712 SYT9Q86SS6 491 aa8.11□□□□□ -1.11
UPF3A-205ENST00000479712 NOC4LQ9BVI4 516 aaKnown RBP8.11□□□□□ -1.11
UPF3A-205ENST00000479712 UBE2OQ9C0C9 1292 aaKnown RBP8.11□□□□□ -1.11
UPF3A-205ENST00000479712 PPP1R1BQ9UD71 204 aaPredicted RBP8.11□□□□□ -1.11
UPF3A-205ENST00000479712 INPP5FQ9Y2H2 1132 aa8.11□□□□□ -1.11
UPF3A-205ENST00000479712 NHSL1Q5SYE7 1610 aa8.11□□□□□ -1.11
UPF3A-205ENST00000479712 BIVM-ERCC5R4GMW8 1640 aa8.11□□□□□ -1.11
UPF3A-205ENST00000479712 JCADQ9P266 1359 aa8.1□□□□□ -1.11
UPF3A-205ENST00000479712 LOC102724428A0A0B4J2F2 783 aa8.1□□□□□ -1.11
UPF3A-205ENST00000479712 LOC105371045A0A1W2PR82 267 aa8.1□□□□□ -1.11
UPF3A-205ENST00000479712 ZBTB42B2RXF5 422 aa8.1□□□□□ -1.11
UPF3A-205ENST00000479712 BMP4P12644 408 aa8.1□□□□□ -1.11
UPF3A-205ENST00000479712 SIK1P57059 783 aa8.1□□□□□ -1.11
UPF3A-205ENST00000479712 PCSK7Q16549 785 aa8.1□□□□□ -1.11
UPF3A-205ENST00000479712 ZNF468Q5VIY5 522 aaPredicted RBP8.1□□□□□ -1.11
UPF3A-205ENST00000479712 HFE2Q6ZVN8 426 aa8.1□□□□□ -1.11
UPF3A-205ENST00000479712 SLC43A3Q8NBI5 491 aa8.1□□□□□ -1.11
UPF3A-205ENST00000479712 SRA1Q9HD15 236 aaKnown RBP8.1□□□□□ -1.11
UPF3A-205ENST00000479712 DNAJB12Q9NXW2 375 aaKnown RBP8.1□□□□□ -1.11
UPF3A-205ENST00000479712 NPATQ14207 1427 aa8.1□□□□□ -1.11
UPF3A-205ENST00000479712 FAM135BQ49AJ0 1406 aa8.1□□□□□ -1.11
UPF3A-205ENST00000479712 SYNMO15061 1565 aa8.1□□□□□ -1.11
UPF3A-205ENST00000479712 J3QW42 95 aa8.09□□□□□ -1.11
UPF3A-205ENST00000479712 GHRHP01286 108 aa8.09□□□□□ -1.11
UPF3A-205ENST00000479712 GRIA4P48058 902 aa8.09□□□□□ -1.11
UPF3A-205ENST00000479712 TMEM102Q8N9M5 508 aaPredicted RBP8.09□□□□□ -1.11
UPF3A-205ENST00000479712 HHIPQ96QV1 700 aa8.09□□□□□ -1.11
UPF3A-205ENST00000479712 BHLHE41Q9C0J9 482 aaPredicted RBP8.09□□□□□ -1.11
UPF3A-205ENST00000479712 RBSNQ9H1K0 784 aa8.09□□□□□ -1.11
UPF3A-205ENST00000479712 ZFYVE1Q9HBF4 777 aa8.09□□□□□ -1.11
UPF3A-205ENST00000479712 COPRSQ9NQ92 184 aa8.09□□□□□ -1.11
UPF3A-205ENST00000479712 PHLPP1O60346 1717 aa8.09□□□□□ -1.11
UPF3A-205ENST00000479712 CDK13Q14004 1512 aaKnown RBP8.08□□□□□ -1.12
UPF3A-205ENST00000479712 METTL12A8MUP2 240 aa8.08□□□□□ -1.12
UPF3A-205ENST00000479712 NFKBIEO00221 500 aa8.08□□□□□ -1.12
UPF3A-205ENST00000479712 SIN3BO75182 1162 aa8.08□□□□□ -1.12
UPF3A-205ENST00000479712 FBXO24O75426 580 aa8.08□□□□□ -1.12
UPF3A-205ENST00000479712 EIF2AK2P19525 551 aaKnown RBP8.08□□□□□ -1.12
UPF3A-205ENST00000479712 ATP11AP98196 1134 aa8.08□□□□□ -1.12
UPF3A-205ENST00000479712 TPTE2Q6XPS3 522 aa8.08□□□□□ -1.12
UPF3A-205ENST00000479712 ASAP3Q8TDY4 903 aa8.08□□□□□ -1.12
UPF3A-205ENST00000479712 ANKRD24Q8TF21 1146 aa8.08□□□□□ -1.12
UPF3A-205ENST00000479712 SLC16A10Q8TF71 515 aa8.08□□□□□ -1.12
UPF3A-205ENST00000479712 NANOS1Q8WY41 292 aaKnown RBP8.08□□□□□ -1.12
UPF3A-205ENST00000479712 UBXN4Q92575 508 aa8.08□□□□□ -1.12
UPF3A-205ENST00000479712 NXPE3Q969Y0 559 aa8.08□□□□□ -1.12
UPF3A-205ENST00000479712 PBX4Q9BYU1 374 aa8.08□□□□□ -1.12
UPF3A-205ENST00000479712 TANGO6Q9C0B7 1094 aa8.08□□□□□ -1.12
UPF3A-205ENST00000479712 RASSF4Q9H2L5 321 aa8.08□□□□□ -1.12
UPF3A-205ENST00000479712 KBTBD4Q9NVX7 518 aa8.08□□□□□ -1.12
UPF3A-205ENST00000479712 AFF2P51816 1311 aa8.07□□□□□ -1.12
UPF3A-205ENST00000479712 CFAP74Q9C0B2 1584 aa8.07□□□□□ -1.12
UPF3A-205ENST00000479712 PDE2AO00408 941 aaPredicted RBP8.07□□□□□ -1.12
UPF3A-205ENST00000479712 C2CD2LO14523 706 aa8.07□□□□□ -1.12
UPF3A-205ENST00000479712 ITPKAP23677 461 aa8.07□□□□□ -1.12
UPF3A-205ENST00000479712 GMPRP36959 345 aa8.07□□□□□ -1.12
UPF3A-205ENST00000479712 PCBP4P57723 403 aaKnown RBP8.07□□□□□ -1.12
UPF3A-205ENST00000479712 PWP1Q13610 501 aa8.07□□□□□ -1.12
UPF3A-205ENST00000479712 SPRED3Q2MJR0 410 aa8.07□□□□□ -1.12
UPF3A-205ENST00000479712 ZSCAN1Q8NBB4 408 aa8.07□□□□□ -1.12
UPF3A-205ENST00000479712 TRIM56Q9BRZ2 755 aaKnown RBP8.07□□□□□ -1.12
UPF3A-205ENST00000479712 NXF1Q9UBU9 619 aaKnown RBP8.07□□□□□ -1.12
UPF3A-205ENST00000479712 ATP10BO94823 1461 aa8.06□□□□□ -1.12
UPF3A-205ENST00000479712 XIRP1Q702N8 1843 aaKnown RBP8.06□□□□□ -1.12
UPF3A-205ENST00000479712 A0A096LPE4 126 aa8.06□□□□□ -1.12
UPF3A-205ENST00000479712 A0A1W2PPZ6 126 aa8.06□□□□□ -1.12
UPF3A-205ENST00000479712 MX2P20592 715 aa8.06□□□□□ -1.12
UPF3A-205ENST00000479712 MAP3K10Q02779 954 aa8.06□□□□□ -1.12
UPF3A-205ENST00000479712 SV2BQ7L1I2 683 aa8.06□□□□□ -1.12
UPF3A-205ENST00000479712 DEFB132Q7Z7B7 95 aa8.06□□□□□ -1.12
UPF3A-205ENST00000479712 RSRP1Q9BUV0 290 aa8.06□□□□□ -1.12
UPF3A-205ENST00000479712 CEP44Q9C0F1 390 aa8.06□□□□□ -1.12
UPF3A-205ENST00000479712 AVENQ9NQS1 362 aaPredicted RBP8.06□□□□□ -1.12
UPF3A-205ENST00000479712 PRKAG2Q9UGJ0 569 aa8.06□□□□□ -1.12
UPF3A-205ENST00000479712 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.06□□□□□ -1.12
UPF3A-205ENST00000479712 UGGT2Q9NYU1 1516 aa8.06□□□□□ -1.12
UPF3A-205ENST00000479712 DNMT1P26358 1616 aaKnown RBP8.06□□□□□ -1.12
UPF3A-205ENST00000479712 CEP350Q5VT06 3117 aa8.06□□□□□ -1.12
UPF3A-205ENST00000479712 SCAPERQ9BY12 1400 aa8.05□□□□□ -1.12
UPF3A-205ENST00000479712 F6X3S4 739 aa8.05□□□□□ -1.12
UPF3A-205ENST00000479712 SMNDC1O75940 238 aaKnown RBP eCLIP8.05□□□□□ -1.12
UPF3A-205ENST00000479712 RLBP1P12271 317 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms