RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 NBPF12Q5TAG4 269 aaPredicted RBP17.88■□□□□ 0.45
ATG4B-218ENST00000479554 DZIP1LQ8IYY4 767 aaKnown RBP17.88■□□□□ 0.45
ATG4B-218ENST00000479554 LPIN2Q92539 896 aa17.88■□□□□ 0.45
ATG4B-218ENST00000479554 SIL1Q9H173 461 aa17.88■□□□□ 0.45
ATG4B-218ENST00000479554 FBXO3Q9UK99 471 aa17.88■□□□□ 0.45
ATG4B-218ENST00000479554 SPRYD7Q5W111 196 aa17.87■□□□□ 0.45
ATG4B-218ENST00000479554 ATG9AQ7Z3C6 839 aa17.87■□□□□ 0.45
ATG4B-218ENST00000479554 ARHGAP45Q92619 1136 aa17.87■□□□□ 0.45
ATG4B-218ENST00000479554 SLC10A4Q96EP9 437 aa17.87■□□□□ 0.45
ATG4B-218ENST00000479554 MEIS3Q99687 375 aa17.87■□□□□ 0.45
ATG4B-218ENST00000479554 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.87■□□□□ 0.45
ATG4B-218ENST00000479554 MYH13Q9UKX3 1938 aa17.86■□□□□ 0.45
ATG4B-218ENST00000479554 CIAO1O76071 339 aa17.86■□□□□ 0.45
ATG4B-218ENST00000479554 IREB2P48200 963 aaKnown RBP17.86■□□□□ 0.45
ATG4B-218ENST00000479554 TM4SF4P48230 202 aa17.86■□□□□ 0.45
ATG4B-218ENST00000479554 HDLBPQ00341 1268 aaKnown RBP17.86■□□□□ 0.45
ATG4B-218ENST00000479554 TEKT1Q969V4 418 aa17.86■□□□□ 0.45
ATG4B-218ENST00000479554 MAST3O60307 1309 aa17.86■□□□□ 0.45
ATG4B-218ENST00000479554 UNCXA6NJT0 531 aa17.85■□□□□ 0.45
ATG4B-218ENST00000479554 TCP10L2B9ZVM9 353 aa17.85■□□□□ 0.45
ATG4B-218ENST00000479554 TNNI2P48788 182 aa17.85■□□□□ 0.45
ATG4B-218ENST00000479554 ATP2B3Q16720 1220 aa17.85■□□□□ 0.45
ATG4B-218ENST00000479554 INTS3Q68E01 1043 aaKnown RBP17.85■□□□□ 0.45
ATG4B-218ENST00000479554 CLMNQ96JQ2 1002 aa17.85■□□□□ 0.45
ATG4B-218ENST00000479554 CEP126Q9P2H0 1117 aa17.85■□□□□ 0.45
ATG4B-218ENST00000479554 SUGT1Q9Y2Z0 365 aa17.85■□□□□ 0.45
ATG4B-218ENST00000479554 TBC1D8O95759 1140 aa17.84■□□□□ 0.45
ATG4B-218ENST00000479554 GNAI3P08754 354 aa17.84■□□□□ 0.45
ATG4B-218ENST00000479554 WNK4Q96J92 1243 aa17.84■□□□□ 0.45
ATG4B-218ENST00000479554 OTOFQ9HC10 1997 aa17.83■□□□□ 0.44
ATG4B-218ENST00000479554 MANSC4A6NHS7 340 aaPredicted RBP17.83■□□□□ 0.44
ATG4B-218ENST00000479554 IPO8O15397 1037 aaKnown RBP17.83■□□□□ 0.44
ATG4B-218ENST00000479554 USP2O75604 605 aaPredicted RBP17.83■□□□□ 0.44
ATG4B-218ENST00000479554 ZBTB48P10074 688 aaPredicted RBP17.83■□□□□ 0.44
ATG4B-218ENST00000479554 IL15P40933 162 aaPredicted RBP17.83■□□□□ 0.44
ATG4B-218ENST00000479554 CTU1Q7Z7A3 348 aaKnown RBP17.83■□□□□ 0.44
ATG4B-218ENST00000479554 ANKRD13AQ8IZ07 590 aa17.83■□□□□ 0.44
ATG4B-218ENST00000479554 WDR66Q8TBY9 1149 aa17.83■□□□□ 0.44
ATG4B-218ENST00000479554 ZDHHC15Q96MV8 337 aa17.83■□□□□ 0.44
ATG4B-218ENST00000479554 TMOD2Q9NZR1 351 aa17.83■□□□□ 0.44
ATG4B-218ENST00000479554 PA2G4Q9UQ80 394 aaKnown RBP17.83■□□□□ 0.44
ATG4B-218ENST00000479554 LAMB1P07942 1786 aa17.82■□□□□ 0.44
ATG4B-218ENST00000479554 FRAT1Q92837 279 aaPredicted RBP17.82■□□□□ 0.44
ATG4B-218ENST00000479554 TEPSINQ96N21 525 aa17.82■□□□□ 0.44
ATG4B-218ENST00000479554 TMEM39BQ9GZU3 492 aa17.82■□□□□ 0.44
ATG4B-218ENST00000479554 COPRSQ9NQ92 184 aa17.82■□□□□ 0.44
ATG4B-218ENST00000479554 ALDH1A1P00352 501 aa17.81■□□□□ 0.44
ATG4B-218ENST00000479554 TRIM27P14373 513 aa17.81■□□□□ 0.44
ATG4B-218ENST00000479554 CACNB3P54284 484 aa17.81■□□□□ 0.44
ATG4B-218ENST00000479554 INHBEP58166 350 aa17.81■□□□□ 0.44
ATG4B-218ENST00000479554 CDAN1Q8IWY9 1227 aa17.81■□□□□ 0.44
ATG4B-218ENST00000479554 ZNF296Q8WUU4 475 aaPredicted RBP17.81■□□□□ 0.44
ATG4B-218ENST00000479554 MRIQ9BWK5 157 aa17.81■□□□□ 0.44
ATG4B-218ENST00000479554 GNL3LQ9NVN8 582 aaKnown RBP17.81■□□□□ 0.44
ATG4B-218ENST00000479554 GPR25O00155 361 aa17.8■□□□□ 0.44
ATG4B-218ENST00000479554 SRGAP3O43295 1099 aa17.8■□□□□ 0.44
ATG4B-218ENST00000479554 BCAR3O75815 825 aa17.8■□□□□ 0.44
ATG4B-218ENST00000479554 HNRNPUQ00839 825 aaKnown RBP eCLIP17.8■□□□□ 0.44
ATG4B-218ENST00000479554 NOM1Q5C9Z4 860 aaKnown RBP17.8■□□□□ 0.44
ATG4B-218ENST00000479554 HHIPL2Q6UWX4 724 aa17.8■□□□□ 0.44
ATG4B-218ENST00000479554 ATF7IPQ6VMQ6 1270 aa17.8■□□□□ 0.44
ATG4B-218ENST00000479554 CFHR5Q9BXR6 569 aa17.8■□□□□ 0.44
ATG4B-218ENST00000479554 APOBEC3HQ6NTF7 200 aaKnown RBP17.79■□□□□ 0.44
ATG4B-218ENST00000479554 IFNL1Q8IU54 200 aa17.79■□□□□ 0.44
ATG4B-218ENST00000479554 ELP3Q9H9T3 547 aa17.79■□□□□ 0.44
ATG4B-218ENST00000479554 SEMA3EO15041 775 aa17.78■□□□□ 0.44
ATG4B-218ENST00000479554 GJA5P36382 358 aa17.78■□□□□ 0.44
ATG4B-218ENST00000479554 PHKA1P46020 1223 aa17.78■□□□□ 0.44
ATG4B-218ENST00000479554 MTX1Q13505 466 aa17.78■□□□□ 0.44
ATG4B-218ENST00000479554 FKBP1CQ5VVH2 108 aa17.78■□□□□ 0.44
ATG4B-218ENST00000479554 FAM83AQ86UY5 434 aa17.78■□□□□ 0.44
ATG4B-218ENST00000479554 CLUAP1Q96AJ1 413 aa17.78■□□□□ 0.44
ATG4B-218ENST00000479554 OPTNQ96CV9 577 aa17.78■□□□□ 0.44
ATG4B-218ENST00000479554 DENND2AQ9ULE3 1009 aa17.78■□□□□ 0.44
ATG4B-218ENST00000479554 TNNQ9UQP3 1299 aa17.78■□□□□ 0.44
ATG4B-218ENST00000479554 GNAI2P04899 355 aa17.77■□□□□ 0.44
ATG4B-218ENST00000479554 LDHBP07195 334 aaKnown RBP17.77■□□□□ 0.44
ATG4B-218ENST00000479554 PRDX5P30044 214 aa17.77■□□□□ 0.44
ATG4B-218ENST00000479554 ADORA1P30542 326 aa17.77■□□□□ 0.44
ATG4B-218ENST00000479554 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.77■□□□□ 0.44
ATG4B-218ENST00000479554 DAGLAQ9Y4D2 1042 aa17.77■□□□□ 0.44
ATG4B-218ENST00000479554 CSADQ9Y600 493 aa17.77■□□□□ 0.44
ATG4B-218ENST00000479554 RPAP1Q9BWH6 1393 aaPredicted RBP17.77■□□□□ 0.43
ATG4B-218ENST00000479554 SALL1Q9NSC2 1324 aa17.76■□□□□ 0.43
ATG4B-218ENST00000479554 IGF2BP3O00425 579 aaKnown RBP eCLIP17.76■□□□□ 0.43
ATG4B-218ENST00000479554 FKTNO75072 461 aa17.76■□□□□ 0.43
ATG4B-218ENST00000479554 MAP3K9P80192 1104 aa17.76■□□□□ 0.43
ATG4B-218ENST00000479554 VGLL4Q14135 290 aa17.76■□□□□ 0.43
ATG4B-218ENST00000479554 DIXDC1Q155Q3 683 aa17.76■□□□□ 0.43
ATG4B-218ENST00000479554 CCDC102BQ68D86 513 aa17.76■□□□□ 0.43
ATG4B-218ENST00000479554 OTUD7BQ6GQQ9 843 aa17.76■□□□□ 0.43
ATG4B-218ENST00000479554 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.76■□□□□ 0.43
ATG4B-218ENST00000479554 HOOK2Q96ED9 719 aa17.76■□□□□ 0.43
ATG4B-218ENST00000479554 R3HDMLQ9H3Y0 253 aa17.76■□□□□ 0.43
ATG4B-218ENST00000479554 AKAP2Q9Y2D5 859 aa17.76■□□□□ 0.43
ATG4B-218ENST00000479554 RGS19P49795 217 aa17.75■□□□□ 0.43
ATG4B-218ENST00000479554 TIMM10P62072 90 aa17.75■□□□□ 0.43
ATG4B-218ENST00000479554 MLLT1Q03111 559 aaPredicted RBP17.75■□□□□ 0.43
ATG4B-218ENST00000479554 PKN2Q16513 984 aaKnown RBP17.75■□□□□ 0.43
ATG4B-218ENST00000479554 ZKSCAN2Q63HK3 967 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms