RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 ZCCHC17Q9NP64 241 aaKnown RBP20.45■□□□□ 0.86
DDX56-210ENST00000479440 CNNM1Q9NRU3 951 aa20.45■□□□□ 0.86
DDX56-210ENST00000479440 TCP10L2B9ZVM9 353 aa20.44■□□□□ 0.86
DDX56-210ENST00000479440 PLIN1O60240 522 aa20.44■□□□□ 0.86
DDX56-210ENST00000479440 GNRH1P01148 92 aa20.44■□□□□ 0.86
DDX56-210ENST00000479440 FOXO4P98177 505 aa20.44■□□□□ 0.86
DDX56-210ENST00000479440 CCDC27Q2M243 656 aa20.44■□□□□ 0.86
DDX56-210ENST00000479440 LDHAL6AQ6ZMR3 332 aa20.44■□□□□ 0.86
DDX56-210ENST00000479440 DZIP1LQ8IYY4 767 aaKnown RBP20.44■□□□□ 0.86
DDX56-210ENST00000479440 FAM43AQ8N2R8 423 aa20.44■□□□□ 0.86
DDX56-210ENST00000479440 TMEM39BQ9GZU3 492 aa20.44■□□□□ 0.86
DDX56-210ENST00000479440 KIAA0100Q14667 2235 aaKnown RBP20.43■□□□□ 0.86
DDX56-210ENST00000479440 SPDYE5A6NIY4 337 aa20.43■□□□□ 0.86
DDX56-210ENST00000479440 TLR2O60603 784 aa20.43■□□□□ 0.86
DDX56-210ENST00000479440 CETPP11597 493 aa20.43■□□□□ 0.86
DDX56-210ENST00000479440 PRMT2P55345 433 aa20.43■□□□□ 0.86
DDX56-210ENST00000479440 LACTBP83111 547 aaPredicted RBP20.43■□□□□ 0.86
DDX56-210ENST00000479440 CDAN1Q8IWY9 1227 aa20.43■□□□□ 0.86
DDX56-210ENST00000479440 H0YGN5 161 aa20.42■□□□□ 0.86
DDX56-210ENST00000479440 MYCP01106 439 aaPredicted RBP20.42■□□□□ 0.86
DDX56-210ENST00000479440 CRKP46108 304 aa20.42■□□□□ 0.86
DDX56-210ENST00000479440 LMBR1LQ6UX01 489 aa20.42■□□□□ 0.86
DDX56-210ENST00000479440 TDRD7Q8NHU6 1098 aaKnown RBP20.42■□□□□ 0.86
DDX56-210ENST00000479440 SH3TC2Q8TF17 1288 aa20.42■□□□□ 0.86
DDX56-210ENST00000479440 IL16Q14005 1332 aa20.42■□□□□ 0.86
DDX56-210ENST00000479440 HIBADHP31937 336 aaKnown RBP20.41■□□□□ 0.86
DDX56-210ENST00000479440 UBE4AQ14139 1066 aa20.41■□□□□ 0.86
DDX56-210ENST00000479440 HOOK2Q96ED9 719 aa20.41■□□□□ 0.86
DDX56-210ENST00000479440 SNAPC2Q13487 334 aa20.4■□□□□ 0.86
DDX56-210ENST00000479440 ERO1BQ86YB8 467 aa20.4■□□□□ 0.86
DDX56-210ENST00000479440 ZNF594Q96JF6 807 aaPredicted RBP20.4■□□□□ 0.86
DDX56-210ENST00000479440 GYG1P46976 350 aa20.39■□□□□ 0.85
DDX56-210ENST00000479440 CHRDL2Q6WN34 429 aa20.39■□□□□ 0.85
DDX56-210ENST00000479440 WWC1Q8IX03 1113 aa20.39■□□□□ 0.85
DDX56-210ENST00000479440 WRNIP1Q96S55 665 aa20.39■□□□□ 0.85
DDX56-210ENST00000479440 ARHGAP39Q9C0H5 1083 aa20.39■□□□□ 0.85
DDX56-210ENST00000479440 TMOD2Q9NZR1 351 aa20.39■□□□□ 0.85
DDX56-210ENST00000479440 SNCAIPQ9Y6H5 919 aa20.39■□□□□ 0.85
DDX56-210ENST00000479440 BTBD19C9JJ37 291 aa20.38■□□□□ 0.85
DDX56-210ENST00000479440 BEND3Q5T5X7 828 aa20.38■□□□□ 0.85
DDX56-210ENST00000479440 NKX2-3Q8TAU0 364 aa20.38■□□□□ 0.85
DDX56-210ENST00000479440 ZSWIM8A7E2V4 1837 aa20.38■□□□□ 0.85
DDX56-210ENST00000479440 CACNA1FO60840 1977 aa20.37■□□□□ 0.85
DDX56-210ENST00000479440 RPAP1Q9BWH6 1393 aaPredicted RBP20.37■□□□□ 0.85
DDX56-210ENST00000479440 FANCIQ9NVI1 1328 aa20.37■□□□□ 0.85
DDX56-210ENST00000479440 GRM8O00222 908 aa20.37■□□□□ 0.85
DDX56-210ENST00000479440 HDLBPQ00341 1268 aaKnown RBP20.37■□□□□ 0.85
DDX56-210ENST00000479440 PPIL2Q13356 520 aa20.37■□□□□ 0.85
DDX56-210ENST00000479440 VPS37DQ86XT2 251 aa20.37■□□□□ 0.85
DDX56-210ENST00000479440 TBC1D22AQ8WUA7 517 aa20.37■□□□□ 0.85
DDX56-210ENST00000479440 EPHA10Q5JZY3 1008 aa20.36■□□□□ 0.85
DDX56-210ENST00000479440 DCAF15Q66K64 600 aa20.36■□□□□ 0.85
DDX56-210ENST00000479440 DPF3Q92784 378 aa20.36■□□□□ 0.85
DDX56-210ENST00000479440 TEKT1Q969V4 418 aa20.36■□□□□ 0.85
DDX56-210ENST00000479440 FAM84BQ96KN1 310 aaPredicted RBP20.36■□□□□ 0.85
DDX56-210ENST00000479440 MAST3O60307 1309 aa20.35■□□□□ 0.85
DDX56-210ENST00000479440 F6X3S4 739 aa20.35■□□□□ 0.85
DDX56-210ENST00000479440 IRF6O14896 467 aa20.35■□□□□ 0.85
DDX56-210ENST00000479440 HOXD10P28358 340 aa20.35■□□□□ 0.85
DDX56-210ENST00000479440 FAM83AQ86UY5 434 aa20.35■□□□□ 0.85
DDX56-210ENST00000479440 SHISA4Q96DD7 197 aa20.35■□□□□ 0.85
DDX56-210ENST00000479440 HTATIP2Q9BUP3 242 aa20.35■□□□□ 0.85
DDX56-210ENST00000479440 C9orf78Q9NZ63 289 aaPredicted RBP20.35■□□□□ 0.85
DDX56-210ENST00000479440 MROH5Q6ZUA9 1318 aa20.34■□□□□ 0.85
DDX56-210ENST00000479440 FRAT2O75474 233 aaPredicted RBP20.34■□□□□ 0.85
DDX56-210ENST00000479440 CACNB3P54284 484 aa20.34■□□□□ 0.85
DDX56-210ENST00000479440 CHAF1AQ13111 956 aaPredicted RBP20.34■□□□□ 0.85
DDX56-210ENST00000479440 RAET1EQ8TD07 263 aa20.34■□□□□ 0.85
DDX56-210ENST00000479440 ZKSCAN4Q969J2 545 aaPredicted RBP20.34■□□□□ 0.85
DDX56-210ENST00000479440 SRRDQ9UH36 339 aa20.34■□□□□ 0.85
DDX56-210ENST00000479440 PPATQ06203 517 aa20.33■□□□□ 0.85
DDX56-210ENST00000479440 NCBP3Q53F19 620 aaKnown RBP20.33■□□□□ 0.85
DDX56-210ENST00000479440 CAVIN4Q5BKX8 364 aa20.33■□□□□ 0.85
DDX56-210ENST00000479440 FKBP1CQ5VVH2 108 aa20.33■□□□□ 0.85
DDX56-210ENST00000479440 C17orf99Q6UX52 265 aa20.33■□□□□ 0.85
DDX56-210ENST00000479440 ZDHHC15Q96MV8 337 aa20.33■□□□□ 0.85
DDX56-210ENST00000479440 RBM27Q9P2N5 1060 aaKnown RBP20.33■□□□□ 0.85
DDX56-210ENST00000479440 VAMP4O75379 141 aa20.32■□□□□ 0.84
DDX56-210ENST00000479440 GRK4P32298 578 aa20.32■□□□□ 0.84
DDX56-210ENST00000479440 PSMC4P43686 418 aa20.32■□□□□ 0.84
DDX56-210ENST00000479440 MTFR1Q15390 333 aa20.32■□□□□ 0.84
DDX56-210ENST00000479440 ANKRD23Q86SG2 305 aa20.32■□□□□ 0.84
DDX56-210ENST00000479440 ZNF341Q9BYN7 854 aa20.32■□□□□ 0.84
DDX56-210ENST00000479440 MYPNQ86TC9 1320 aa20.31■□□□□ 0.84
DDX56-210ENST00000479440 ALDH1L1O75891 902 aa20.31■□□□□ 0.84
DDX56-210ENST00000479440 FMNL1O95466 1100 aaPredicted RBP20.31■□□□□ 0.84
DDX56-210ENST00000479440 OSBPP22059 807 aa20.31■□□□□ 0.84
DDX56-210ENST00000479440 GJA8P48165 433 aa20.31■□□□□ 0.84
DDX56-210ENST00000479440 UBXN2AP68543 259 aa20.31■□□□□ 0.84
DDX56-210ENST00000479440 GRIK5Q16478 980 aa20.31■□□□□ 0.84
DDX56-210ENST00000479440 TRIM47Q96LD4 638 aa20.31■□□□□ 0.84
DDX56-210ENST00000479440 CPA4Q9UI42 421 aa20.31■□□□□ 0.84
DDX56-210ENST00000479440 IQSEC3Q9UPP2 1182 aaPredicted RBP20.31■□□□□ 0.84
DDX56-210ENST00000479440 RIPOR2Q9Y4F9 1068 aa20.31■□□□□ 0.84
DDX56-210ENST00000479440 ECM2O94769 699 aaPredicted RBP20.3■□□□□ 0.84
DDX56-210ENST00000479440 FBXO33Q7Z6M2 555 aa20.3■□□□□ 0.84
DDX56-210ENST00000479440 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.3■□□□□ 0.84
DDX56-210ENST00000479440 MRIQ9BWK5 157 aa20.3■□□□□ 0.84
DDX56-210ENST00000479440 PUS3Q9BZE2 481 aaKnown RBP20.3■□□□□ 0.84
DDX56-210ENST00000479440 SUGT1Q9Y2Z0 365 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 140.5 ms