RNA–Protein interactions for RNA: ENST00000479135.5

EWSR1-216, Transcript of EWS RNA binding protein 1, humanhuman

TSL 1 (best)

Gene EWSR1, Length 7,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-216ENST00000479135 RAPGEF5Q92565 580 aa12.3□□□□□ -0.44
EWSR1-216ENST00000479135 GDAP1L1Q96MZ0 367 aa12.3□□□□□ -0.44
EWSR1-216ENST00000479135 PLIN2Q99541 437 aa12.3□□□□□ -0.44
EWSR1-216ENST00000479135 AMOTL2Q9Y2J4 779 aa12.3□□□□□ -0.44
EWSR1-216ENST00000479135 CAPN7Q9Y6W3 813 aa12.3□□□□□ -0.44
EWSR1-216ENST00000479135 NOP56O00567 594 aaKnown RBP12.3□□□□□ -0.44
EWSR1-216ENST00000479135 ARHGEF9O43307 516 aa12.3□□□□□ -0.44
EWSR1-216ENST00000479135 BAG4O95429 457 aaKnown RBP12.3□□□□□ -0.44
EWSR1-216ENST00000479135 PDE6AP16499 860 aa12.3□□□□□ -0.44
EWSR1-216ENST00000479135 DDX28Q9NUL7 540 aaKnown RBP12.3□□□□□ -0.44
EWSR1-216ENST00000479135 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.3□□□□□ -0.44
EWSR1-216ENST00000479135 DNAJC8O75937 253 aaPredicted RBP12.29□□□□□ -0.44
EWSR1-216ENST00000479135 LONRF3Q496Y0 759 aa12.29□□□□□ -0.44
EWSR1-216ENST00000479135 ARMC9Q7Z3E5 817 aa12.29□□□□□ -0.44
EWSR1-216ENST00000479135 SCYL1Q96KG9 808 aa12.29□□□□□ -0.44
EWSR1-216ENST00000479135 PSMB7Q99436 277 aa12.29□□□□□ -0.44
EWSR1-216ENST00000479135 USTQ9Y2C2 406 aa12.29□□□□□ -0.44
EWSR1-216ENST00000479135 MYSM1Q5VVJ2 828 aa12.29□□□□□ -0.44
EWSR1-216ENST00000479135 SMAD5Q99717 465 aaKnown RBP12.29□□□□□ -0.44
EWSR1-216ENST00000479135 BAG5Q9UL15 447 aa12.29□□□□□ -0.44
EWSR1-216ENST00000479135 NOB1Q9ULX3 412 aaKnown RBP12.29□□□□□ -0.44
EWSR1-216ENST00000479135 LRRC9Q6ZRR7 1453 aa12.29□□□□□ -0.44
EWSR1-216ENST00000479135 ZFXP17010 805 aaPredicted RBP12.29□□□□□ -0.44
EWSR1-216ENST00000479135 KMT5BQ4FZB7 885 aa12.29□□□□□ -0.44
EWSR1-216ENST00000479135 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.29□□□□□ -0.44
EWSR1-216ENST00000479135 PARD3BQ8TEW8 1205 aa12.29□□□□□ -0.44
EWSR1-216ENST00000479135 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.29□□□□□ -0.44
EWSR1-216ENST00000479135 WASHC2AQ641Q2 1341 aa12.29□□□□□ -0.44
EWSR1-216ENST00000479135 WASHC2CQ9Y4E1 1318 aa12.29□□□□□ -0.44
EWSR1-216ENST00000479135 CCDC194A0A1B0GVG4 234 aa12.29□□□□□ -0.44
EWSR1-216ENST00000479135 GOLGA6BA6NDN3 693 aa12.29□□□□□ -0.44
EWSR1-216ENST00000479135 RAPGEF1Q13905 1077 aa12.29□□□□□ -0.44
EWSR1-216ENST00000479135 E2F5Q15329 346 aa12.29□□□□□ -0.44
EWSR1-216ENST00000479135 PRPF40BQ6NWY9 871 aaKnown RBP12.29□□□□□ -0.44
EWSR1-216ENST00000479135 C16orf87Q6PH81 154 aa12.29□□□□□ -0.44
EWSR1-216ENST00000479135 ZNF513Q8N8E2 541 aaPredicted RBP12.29□□□□□ -0.44
EWSR1-216ENST00000479135 ANGPT1Q15389 498 aa12.29□□□□□ -0.44
EWSR1-216ENST00000479135 GRAMD4Q6IC98 578 aa12.29□□□□□ -0.44
EWSR1-216ENST00000479135 EIF2AQ9BY44 585 aaKnown RBP12.29□□□□□ -0.44
EWSR1-216ENST00000479135 ANO3Q9BYT9 981 aa12.29□□□□□ -0.44
EWSR1-216ENST00000479135 NCAPD3P42695 1498 aa12.28□□□□□ -0.44
EWSR1-216ENST00000479135 FGD6Q6ZV73 1430 aa12.28□□□□□ -0.44
EWSR1-216ENST00000479135 MMEL1Q495T6 779 aa12.28□□□□□ -0.44
EWSR1-216ENST00000479135 SYT10Q6XYQ8 523 aa12.28□□□□□ -0.44
EWSR1-216ENST00000479135 UNC45BQ8IWX7 931 aa12.28□□□□□ -0.44
EWSR1-216ENST00000479135 GSTA1P08263 222 aa12.28□□□□□ -0.44
EWSR1-216ENST00000479135 GSTA2P09210 222 aa12.28□□□□□ -0.44
EWSR1-216ENST00000479135 CCDC18Q5T9S5 1454 aa12.28□□□□□ -0.44
EWSR1-216ENST00000479135 I3L4J1 428 aa12.28□□□□□ -0.44
EWSR1-216ENST00000479135 CLTAP09496 248 aa12.28□□□□□ -0.44
EWSR1-216ENST00000479135 PSMC1P62191 440 aaKnown RBP12.28□□□□□ -0.44
EWSR1-216ENST00000479135 RSBN1LQ6PCB5 846 aaPredicted RBP12.28□□□□□ -0.44
EWSR1-216ENST00000479135 ATP6V1E2Q96A05 226 aa12.28□□□□□ -0.44
EWSR1-216ENST00000479135 FGD4Q96M96 766 aa12.28□□□□□ -0.44
EWSR1-216ENST00000479135 TEKT2Q9UIF3 430 aa12.28□□□□□ -0.44
EWSR1-216ENST00000479135 SCOCQ9UIL1 159 aa12.28□□□□□ -0.44
EWSR1-216ENST00000479135 SSFA2P28290 1259 aa12.28□□□□□ -0.44
EWSR1-216ENST00000479135 OCRLQ01968 901 aa12.28□□□□□ -0.44
EWSR1-216ENST00000479135 CCDC152Q4G0S7 254 aa12.28□□□□□ -0.44
EWSR1-216ENST00000479135 RNPEPQ9H4A4 650 aa12.28□□□□□ -0.44
EWSR1-216ENST00000479135 AKIRIN2Q53H80 203 aa12.28□□□□□ -0.44
EWSR1-216ENST00000479135 AFAP1L2Q8N4X5 818 aa12.28□□□□□ -0.44
EWSR1-216ENST00000479135 SDCCAG3Q96C92 435 aa12.28□□□□□ -0.44
EWSR1-216ENST00000479135 RPGRIP1Q96KN7 1286 aa12.28□□□□□ -0.44
EWSR1-216ENST00000479135 TMOD2Q9NZR1 351 aa12.28□□□□□ -0.44
EWSR1-216ENST00000479135 SMARCA5O60264 1052 aaPredicted RBP12.28□□□□□ -0.44
EWSR1-216ENST00000479135 KRT15P19012 456 aa12.28□□□□□ -0.44
EWSR1-216ENST00000479135 CFAP61Q8NHU2 1237 aa12.28□□□□□ -0.44
EWSR1-216ENST00000479135 CDC26Q8NHZ8 85 aa12.28□□□□□ -0.44
EWSR1-216ENST00000479135 POLR3CQ9BUI4 534 aaPredicted RBP12.28□□□□□ -0.44
EWSR1-216ENST00000479135 CNGB3Q9NQW8 809 aa12.28□□□□□ -0.44
EWSR1-216ENST00000479135 UBAP1Q9NZ09 502 aa12.28□□□□□ -0.44
EWSR1-216ENST00000479135 BTN2A2Q8WVV5 523 aa12.27□□□□□ -0.44
EWSR1-216ENST00000479135 SMYD2Q9NRG4 433 aa12.27□□□□□ -0.44
EWSR1-216ENST00000479135 MTRF1LQ9UGC7 380 aaKnown RBP12.27□□□□□ -0.44
EWSR1-216ENST00000479135 TRPC5Q9UL62 973 aaPredicted RBP12.27□□□□□ -0.44
EWSR1-216ENST00000479135 FMNL1O95466 1100 aaPredicted RBP12.27□□□□□ -0.44
EWSR1-216ENST00000479135 TBC1D8O95759 1140 aa12.27□□□□□ -0.44
EWSR1-216ENST00000479135 IFNLR1Q8IU57 520 aaPredicted RBP12.27□□□□□ -0.44
EWSR1-216ENST00000479135 LRGUKQ96M69 825 aa12.27□□□□□ -0.44
EWSR1-216ENST00000479135 HDAC9Q9UKV0 1011 aa12.27□□□□□ -0.44
EWSR1-216ENST00000479135 PAXBP1Q9Y5B6 917 aa12.27□□□□□ -0.44
EWSR1-216ENST00000479135 LVRNQ6Q4G3 990 aa12.27□□□□□ -0.45
EWSR1-216ENST00000479135 ZNF444Q8N0Y2 327 aaPredicted RBP12.27□□□□□ -0.45
EWSR1-216ENST00000479135 UIMC1Q96RL1 719 aa12.27□□□□□ -0.45
EWSR1-216ENST00000479135 HAUS8Q9BT25 410 aa12.27□□□□□ -0.45
EWSR1-216ENST00000479135 PPP6R1Q9UPN7 881 aa12.27□□□□□ -0.45
EWSR1-216ENST00000479135 SCINQ9Y6U3 715 aa12.27□□□□□ -0.45
EWSR1-216ENST00000479135 HINFPQ9BQA5 517 aa12.27□□□□□ -0.45
EWSR1-216ENST00000479135 SMCR8Q8TEV9 937 aaPredicted RBP12.27□□□□□ -0.45
EWSR1-216ENST00000479135 SYNJ1O43426 1573 aa12.27□□□□□ -0.45
EWSR1-216ENST00000479135 DCAF17Q5H9S7 520 aaPredicted RBP12.26□□□□□ -0.45
EWSR1-216ENST00000479135 DDX17Q92841 729 aaKnown RBP12.26□□□□□ -0.45
EWSR1-216ENST00000479135 PPWD1Q96BP3 646 aaKnown RBP12.26□□□□□ -0.45
EWSR1-216ENST00000479135 NACA2Q9H009 215 aa12.26□□□□□ -0.45
EWSR1-216ENST00000479135 HPS4Q9NQG7 708 aa12.26□□□□□ -0.45
EWSR1-216ENST00000479135 MYBBP1AQ9BQG0 1328 aaKnown RBP12.26□□□□□ -0.45
EWSR1-216ENST00000479135 STX1AQ16623 288 aa12.26□□□□□ -0.45
EWSR1-216ENST00000479135 CTCFLQ8NI51 663 aaPredicted RBP12.26□□□□□ -0.45
EWSR1-216ENST00000479135 MYCBPQ99417 103 aaPredicted RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms