RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 APOBEC3FQ8IUX4 373 aaKnown RBP10.25□□□□□ -0.77
HDAC6-221ENST00000477561 AIDAQ96BJ3 306 aa10.25□□□□□ -0.77
HDAC6-221ENST00000477561 HHIPL1Q96JK4 782 aa10.25□□□□□ -0.77
HDAC6-221ENST00000477561 NEUROD6Q96NK8 337 aa10.25□□□□□ -0.77
HDAC6-221ENST00000477561 DEFB129Q9H1M3 183 aa10.25□□□□□ -0.77
HDAC6-221ENST00000477561 TDRD3Q9H7E2 651 aaKnown RBP10.25□□□□□ -0.77
HDAC6-221ENST00000477561 WBP1LQ9NX94 342 aa10.25□□□□□ -0.77
HDAC6-221ENST00000477561 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.25□□□□□ -0.77
HDAC6-221ENST00000477561 SERPINA10Q9UK55 444 aa10.25□□□□□ -0.77
HDAC6-221ENST00000477561 FZD1Q9UP38 647 aa10.25□□□□□ -0.77
HDAC6-221ENST00000477561 A0A1B0GUL7 405 aa10.24□□□□□ -0.77
HDAC6-221ENST00000477561 POLA2Q14181 598 aa10.24□□□□□ -0.77
HDAC6-221ENST00000477561 CCDC102BQ68D86 513 aa10.24□□□□□ -0.77
HDAC6-221ENST00000477561 TBC1D22AQ8WUA7 517 aa10.24□□□□□ -0.77
HDAC6-221ENST00000477561 XAGE2Q96GT9 111 aa10.24□□□□□ -0.77
HDAC6-221ENST00000477561 GNL3LQ9NVN8 582 aaKnown RBP10.24□□□□□ -0.77
HDAC6-221ENST00000477561 ZNF70Q9UC06 446 aaPredicted RBP10.24□□□□□ -0.77
HDAC6-221ENST00000477561 COG6Q9Y2V7 657 aa10.24□□□□□ -0.77
HDAC6-221ENST00000477561 SURF6O75683 361 aaKnown RBP10.23□□□□□ -0.77
HDAC6-221ENST00000477561 NF2P35240 595 aa10.23□□□□□ -0.77
HDAC6-221ENST00000477561 MAP2K1Q02750 393 aaPredicted RBP10.23□□□□□ -0.77
HDAC6-221ENST00000477561 OS9Q13438 667 aaPredicted RBP10.23□□□□□ -0.77
HDAC6-221ENST00000477561 WDR66Q8TBY9 1149 aa10.23□□□□□ -0.77
HDAC6-221ENST00000477561 SSH3Q8TE77 659 aa10.23□□□□□ -0.77
HDAC6-221ENST00000477561 TSKSQ9UJT2 592 aa10.23□□□□□ -0.77
HDAC6-221ENST00000477561 AKAP2Q9Y2D5 859 aa10.23□□□□□ -0.77
HDAC6-221ENST00000477561 GTF3C3Q9Y5Q9 886 aa10.23□□□□□ -0.77
HDAC6-221ENST00000477561 COL1A1P02452 1464 aaPredicted RBP10.23□□□□□ -0.77
HDAC6-221ENST00000477561 FAM155AB1AL88 458 aaPredicted RBP10.22□□□□□ -0.77
HDAC6-221ENST00000477561 TCP10L2B9ZVM9 353 aa10.22□□□□□ -0.77
HDAC6-221ENST00000477561 MS4A1P11836 297 aa10.22□□□□□ -0.77
HDAC6-221ENST00000477561 MAP2K2P36507 400 aa10.22□□□□□ -0.77
HDAC6-221ENST00000477561 CACNB3P54284 484 aa10.22□□□□□ -0.77
HDAC6-221ENST00000477561 FKBP1BP68106 108 aa10.22□□□□□ -0.77
HDAC6-221ENST00000477561 KIF23Q02241 960 aaPredicted RBP10.22□□□□□ -0.77
HDAC6-221ENST00000477561 RASA3Q14644 834 aa10.22□□□□□ -0.77
HDAC6-221ENST00000477561 SPDYE2Q495Y8 402 aa10.22□□□□□ -0.77
HDAC6-221ENST00000477561 GORABQ5T7V8 394 aa10.22□□□□□ -0.77
HDAC6-221ENST00000477561 NBPF12Q5TAG4 269 aaPredicted RBP10.22□□□□□ -0.77
HDAC6-221ENST00000477561 TEKT1Q969V4 418 aa10.22□□□□□ -0.77
HDAC6-221ENST00000477561 CCDC102AQ96A19 550 aa10.22□□□□□ -0.77
HDAC6-221ENST00000477561 BEGAINQ9BUH8 593 aa10.22□□□□□ -0.77
HDAC6-221ENST00000477561 DENND2AQ9ULE3 1009 aa10.22□□□□□ -0.77
HDAC6-221ENST00000477561 SUPT16HQ9Y5B9 1047 aaKnown RBP10.22□□□□□ -0.77
HDAC6-221ENST00000477561 PRDX5P30044 214 aa10.21□□□□□ -0.77
HDAC6-221ENST00000477561 CTCFP49711 727 aaPredicted RBP10.21□□□□□ -0.77
HDAC6-221ENST00000477561 LBX1P52954 281 aa10.21□□□□□ -0.77
HDAC6-221ENST00000477561 HDLBPQ00341 1268 aaKnown RBP10.21□□□□□ -0.77
HDAC6-221ENST00000477561 MKRN3Q13064 507 aaKnown RBP10.21□□□□□ -0.77
HDAC6-221ENST00000477561 NOGQ13253 232 aa10.21□□□□□ -0.77
HDAC6-221ENST00000477561 RASGRF1Q13972 1273 aa10.21□□□□□ -0.77
HDAC6-221ENST00000477561 MVPQ14764 893 aaKnown RBP10.21□□□□□ -0.77
HDAC6-221ENST00000477561 DIXDC1Q155Q3 683 aa10.21□□□□□ -0.77
HDAC6-221ENST00000477561 C20orf194Q5TEA3 1177 aa10.21□□□□□ -0.77
HDAC6-221ENST00000477561 APOBEC3HQ6NTF7 200 aaKnown RBP10.21□□□□□ -0.77
HDAC6-221ENST00000477561 CEP85Q6P2H3 762 aa10.21□□□□□ -0.77
HDAC6-221ENST00000477561 RASAL3Q86YV0 1011 aa10.21□□□□□ -0.77
HDAC6-221ENST00000477561 CDAN1Q8IWY9 1227 aa10.21□□□□□ -0.77
HDAC6-221ENST00000477561 ANGEL1Q9UNK9 670 aaKnown RBP10.21□□□□□ -0.77
HDAC6-221ENST00000477561 SEMA3EO15041 775 aa10.2□□□□□ -0.78
HDAC6-221ENST00000477561 LDHBP07195 334 aaKnown RBP10.2□□□□□ -0.78
HDAC6-221ENST00000477561 SLC10A3P09131 477 aa10.2□□□□□ -0.78
HDAC6-221ENST00000477561 ATXN8OSP0DMR3 200 aa10.2□□□□□ -0.78
HDAC6-221ENST00000477561 HSPA8P11142 646 aaKnown RBP10.2□□□□□ -0.78
HDAC6-221ENST00000477561 SUPT20HL1Q3ZLR7 823 aa10.2□□□□□ -0.78
HDAC6-221ENST00000477561 SAMD1Q6SPF0 538 aaPredicted RBP10.2□□□□□ -0.78
HDAC6-221ENST00000477561 PI16Q6UXB8 463 aa10.2□□□□□ -0.78
HDAC6-221ENST00000477561 ARMC9Q7Z3E5 817 aa10.2□□□□□ -0.78
HDAC6-221ENST00000477561 ARAP2Q8WZ64 1704 aa10.2□□□□□ -0.78
HDAC6-221ENST00000477561 ZDHHC15Q96MV8 337 aa10.2□□□□□ -0.78
HDAC6-221ENST00000477561 TMEM39BQ9GZU3 492 aa10.2□□□□□ -0.78
HDAC6-221ENST00000477561 ABCF2Q9UG63 623 aa10.2□□□□□ -0.78
HDAC6-221ENST00000477561 SUGT1Q9Y2Z0 365 aa10.2□□□□□ -0.78
HDAC6-221ENST00000477561 PAPPA2Q9BXP8 1791 aa10.19□□□□□ -0.78
HDAC6-221ENST00000477561 MAST3O60307 1309 aa10.19□□□□□ -0.78
HDAC6-221ENST00000477561 TNNI2P48788 182 aa10.19□□□□□ -0.78
HDAC6-221ENST00000477561 C1QBPQ07021 282 aaKnown RBP10.19□□□□□ -0.78
HDAC6-221ENST00000477561 TNFAIP1Q13829 316 aa10.19□□□□□ -0.78
HDAC6-221ENST00000477561 TNNI3KQ59H18 835 aa10.19□□□□□ -0.78
HDAC6-221ENST00000477561 HHIPL2Q6UWX4 724 aa10.19□□□□□ -0.78
HDAC6-221ENST00000477561 TBC1D9Q6ZT07 1266 aa10.19□□□□□ -0.78
HDAC6-221ENST00000477561 CSRNP1Q96S65 589 aa10.19□□□□□ -0.78
HDAC6-221ENST00000477561 DBNDD2Q9BQY9 259 aa10.19□□□□□ -0.78
HDAC6-221ENST00000477561 MRIQ9BWK5 157 aa10.19□□□□□ -0.78
HDAC6-221ENST00000477561 CCDC8Q9H0W5 538 aaPredicted RBP10.19□□□□□ -0.78
HDAC6-221ENST00000477561 BCL11AQ9H165 835 aa10.19□□□□□ -0.78
HDAC6-221ENST00000477561 HMG20BQ9P0W2 317 aa10.19□□□□□ -0.78
HDAC6-221ENST00000477561 DDX19BQ9UMR2 479 aa10.19□□□□□ -0.78
HDAC6-221ENST00000477561 EXOC6BQ9Y2D4 811 aa10.19□□□□□ -0.78
HDAC6-221ENST00000477561 NOP58Q9Y2X3 529 aaKnown RBP10.19□□□□□ -0.78
HDAC6-221ENST00000477561 DAGLAQ9Y4D2 1042 aa10.19□□□□□ -0.78
HDAC6-221ENST00000477561 PPP2R3BQ9Y5P8 575 aa10.19□□□□□ -0.78
HDAC6-221ENST00000477561 FPGT-TNNI3KV9GXZ4 949 aa10.19□□□□□ -0.78
HDAC6-221ENST00000477561 THSD7BQ9C0I4 1608 aa10.18□□□□□ -0.78
HDAC6-221ENST00000477561 SSC5DA1L4H1 1573 aa10.18□□□□□ -0.78
HDAC6-221ENST00000477561 SALL1Q9NSC2 1324 aa10.18□□□□□ -0.78
HDAC6-221ENST00000477561 MYH13Q9UKX3 1938 aa10.18□□□□□ -0.78
HDAC6-221ENST00000477561 APBB1O00213 710 aa10.18□□□□□ -0.78
HDAC6-221ENST00000477561 PPP1R12BO60237 982 aaPredicted RBP10.18□□□□□ -0.78
HDAC6-221ENST00000477561 USP2O75604 605 aaPredicted RBP10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 165.8 ms