RNA–Protein interactions for RNA: ENST00000476217.5

SSR3-206, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 3 BASIC

Gene SSR3, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-206ENST00000476217 DUOXA2Q1HG44 320 aa8.33□□□□□ -1.08
SSR3-206ENST00000476217 SPRED3Q2MJR0 410 aa8.33□□□□□ -1.08
SSR3-206ENST00000476217 SHISA2Q6UWI4 295 aa8.33□□□□□ -1.08
SSR3-206ENST00000476217 ANKRD24Q8TF21 1146 aa8.33□□□□□ -1.08
SSR3-206ENST00000476217 KLHDC7BQ96G42 594 aa8.33□□□□□ -1.08
SSR3-206ENST00000476217 C12orf49Q9H741 205 aa8.33□□□□□ -1.08
SSR3-206ENST00000476217 AKTIPQ9H8T0 292 aa8.33□□□□□ -1.08
SSR3-206ENST00000476217 FCGRTP55899 365 aa8.32□□□□□ -1.08
SSR3-206ENST00000476217 PPP2R3AQ06190 1150 aa8.32□□□□□ -1.08
SSR3-206ENST00000476217 FOXD4L6Q3SYB3 417 aaPredicted RBP8.32□□□□□ -1.08
SSR3-206ENST00000476217 GPAT2Q6NUI2 795 aa8.32□□□□□ -1.08
SSR3-206ENST00000476217 NXPE4Q6UWF7 544 aa8.32□□□□□ -1.08
SSR3-206ENST00000476217 FOXD4L3Q6VB84 417 aaPredicted RBP8.32□□□□□ -1.08
SSR3-206ENST00000476217 CARD10Q9BWT7 1032 aa8.32□□□□□ -1.08
SSR3-206ENST00000476217 TOPBP1Q92547 1522 aa8.31□□□□□ -1.08
SSR3-206ENST00000476217 TM4SF5O14894 197 aa8.31□□□□□ -1.08
SSR3-206ENST00000476217 AP3B2Q13367 1082 aa8.31□□□□□ -1.08
SSR3-206ENST00000476217 PI16Q6UXB8 463 aa8.31□□□□□ -1.08
SSR3-206ENST00000476217 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.31□□□□□ -1.08
SSR3-206ENST00000476217 SPOCK3Q9BQ16 436 aa8.31□□□□□ -1.08
SSR3-206ENST00000476217 CEP41Q9BYV8 373 aa8.31□□□□□ -1.08
SSR3-206ENST00000476217 WWC3Q9ULE0 1092 aa8.31□□□□□ -1.08
SSR3-206ENST00000476217 URB2Q14146 1524 aaKnown RBP8.3□□□□□ -1.08
SSR3-206ENST00000476217 F8W735 103 aaPredicted RBP8.3□□□□□ -1.08
SSR3-206ENST00000476217 EIF4BP23588 611 aaKnown RBP8.3□□□□□ -1.08
SSR3-206ENST00000476217 XPCQ01831 940 aaPredicted RBP8.3□□□□□ -1.08
SSR3-206ENST00000476217 GSTM4Q03013 218 aa8.3□□□□□ -1.08
SSR3-206ENST00000476217 ZNF326Q5BKZ1 582 aaKnown RBP8.3□□□□□ -1.08
SSR3-206ENST00000476217 FBXO33Q7Z6M2 555 aa8.3□□□□□ -1.08
SSR3-206ENST00000476217 WFDC12Q8WWY7 111 aa8.3□□□□□ -1.08
SSR3-206ENST00000476217 CEP44Q9C0F1 390 aa8.3□□□□□ -1.08
SSR3-206ENST00000476217 RNF208Q9H0X6 261 aa8.3□□□□□ -1.08
SSR3-206ENST00000476217 AK5Q9Y6K8 562 aa8.3□□□□□ -1.08
SSR3-206ENST00000476217 MRC2Q9UBG0 1479 aa8.3□□□□□ -1.08
SSR3-206ENST00000476217 MEGF11A6BM72 1044 aa8.29□□□□□ -1.08
SSR3-206ENST00000476217 PROCP04070 461 aa8.29□□□□□ -1.08
SSR3-206ENST00000476217 ITGB2P05107 769 aa8.29□□□□□ -1.08
SSR3-206ENST00000476217 MFAP1P55081 439 aaKnown RBP8.29□□□□□ -1.08
SSR3-206ENST00000476217 ZNF423Q2M1K9 1284 aa8.29□□□□□ -1.08
SSR3-206ENST00000476217 UVSSAQ2YD98 709 aa8.29□□□□□ -1.08
SSR3-206ENST00000476217 ACAD11Q709F0 780 aa8.29□□□□□ -1.08
SSR3-206ENST00000476217 FAM9AQ8IZU1 332 aaPredicted RBP8.29□□□□□ -1.08
SSR3-206ENST00000476217 FGD5Q6ZNL6 1462 aa8.29□□□□□ -1.08
SSR3-206ENST00000476217 NLRP12P59046 1061 aa8.28□□□□□ -1.08
SSR3-206ENST00000476217 TRIM26Q12899 539 aaPredicted RBP8.28□□□□□ -1.08
SSR3-206ENST00000476217 ANKRD34AQ69YU3 496 aa8.28□□□□□ -1.08
SSR3-206ENST00000476217 Q6ZS46 218 aa8.28□□□□□ -1.08
SSR3-206ENST00000476217 FOXD4L4Q8WXT5 416 aaPredicted RBP8.28□□□□□ -1.08
SSR3-206ENST00000476217 DUSP9Q99956 384 aaKnown RBP8.28□□□□□ -1.08
SSR3-206ENST00000476217 OSBPL7Q9BZF2 842 aa8.28□□□□□ -1.08
SSR3-206ENST00000476217 TMEM39AQ9NV64 488 aa8.28□□□□□ -1.08
SSR3-206ENST00000476217 SAMM50Q9Y512 469 aa8.28□□□□□ -1.08
SSR3-206ENST00000476217 ADAM11O75078 769 aa8.27□□□□□ -1.09
SSR3-206ENST00000476217 NOS3P29474 1203 aa8.27□□□□□ -1.09
SSR3-206ENST00000476217 IREB2P48200 963 aaKnown RBP8.27□□□□□ -1.09
SSR3-206ENST00000476217 DAB2P98082 770 aa8.27□□□□□ -1.09
SSR3-206ENST00000476217 C3orf58Q8NDZ4 430 aa8.27□□□□□ -1.09
SSR3-206ENST00000476217 SETDB2Q96T68 719 aa8.27□□□□□ -1.09
SSR3-206ENST00000476217 CORO1BQ9BR76 489 aa8.27□□□□□ -1.09
SSR3-206ENST00000476217 RUSC1Q9BVN2 902 aa8.27□□□□□ -1.09
SSR3-206ENST00000476217 BCL2L13Q9BXK5 485 aa8.27□□□□□ -1.09
SSR3-206ENST00000476217 CYP4F12Q9HCS2 524 aa8.27□□□□□ -1.09
SSR3-206ENST00000476217 GPN3Q9UHW5 284 aaPredicted RBP8.27□□□□□ -1.09
SSR3-206ENST00000476217 AKAP2Q9Y2D5 859 aa8.27□□□□□ -1.09
SSR3-206ENST00000476217 EEA1Q15075 1411 aa8.27□□□□□ -1.09
SSR3-206ENST00000476217 WDR62O43379 1518 aa8.26□□□□□ -1.09
SSR3-206ENST00000476217 PSMD2Q13200 908 aa8.26□□□□□ -1.09
SSR3-206ENST00000476217 POU4F3Q15319 338 aa8.26□□□□□ -1.09
SSR3-206ENST00000476217 EXOSC6Q5RKV6 272 aaKnown RBP8.26□□□□□ -1.09
SSR3-206ENST00000476217 TMC4Q7Z404 712 aa8.26□□□□□ -1.09
SSR3-206ENST00000476217 DZIP1LQ8IYY4 767 aaKnown RBP8.26□□□□□ -1.09
SSR3-206ENST00000476217 USP26Q9BXU7 913 aa8.26□□□□□ -1.09
SSR3-206ENST00000476217 EMILIN2Q9BXX0 1053 aa8.26□□□□□ -1.09
SSR3-206ENST00000476217 KCNK4Q9NYG8 393 aa8.26□□□□□ -1.09
SSR3-206ENST00000476217 PARP2Q9UGN5 583 aa8.26□□□□□ -1.09
SSR3-206ENST00000476217 SOGA1O94964 1423 aa8.26□□□□□ -1.09
SSR3-206ENST00000476217 THOC2Q8NI27 1593 aaKnown RBP8.26□□□□□ -1.09
SSR3-206ENST00000476217 POLA1P09884 1462 aaPredicted RBP8.26□□□□□ -1.09
SSR3-206ENST00000476217 LOC100289279A0A1B0GTE1 492 aa8.25□□□□□ -1.09
SSR3-206ENST00000476217 KIAA1211Q6ZU35 1233 aa8.25□□□□□ -1.09
SSR3-206ENST00000476217 NRSN2Q9GZP1 204 aa8.25□□□□□ -1.09
SSR3-206ENST00000476217 SUGCTQ9HAC7 445 aa8.25□□□□□ -1.09
SSR3-206ENST00000476217 MRS2Q9HD23 443 aa8.25□□□□□ -1.09
SSR3-206ENST00000476217 SYNGAP1Q96PV0 1343 aa8.25□□□□□ -1.09
SSR3-206ENST00000476217 DDX3YO15523 660 aaKnown RBP8.24□□□□□ -1.09
SSR3-206ENST00000476217 SORBS3O60504 671 aa8.24□□□□□ -1.09
SSR3-206ENST00000476217 USP17L7P0C7H9 530 aa8.24□□□□□ -1.09
SSR3-206ENST00000476217 GLB1P16278 677 aa8.24□□□□□ -1.09
SSR3-206ENST00000476217 NUTM2GQ5VZR2 741 aa8.24□□□□□ -1.09
SSR3-206ENST00000476217 SCARA3Q6AZY7 606 aa8.24□□□□□ -1.09
SSR3-206ENST00000476217 FDX2Q6P4F2 183 aa8.24□□□□□ -1.09
SSR3-206ENST00000476217 UBASH3BQ8TF42 649 aa8.24□□□□□ -1.09
SSR3-206ENST00000476217 SSBP4Q9BWG4 385 aaPredicted RBP8.24□□□□□ -1.09
SSR3-206ENST00000476217 TMPRSS13Q9BYE2 586 aa8.24□□□□□ -1.09
SSR3-206ENST00000476217 RUSC2Q8N2Y8 1516 aa8.24□□□□□ -1.09
SSR3-206ENST00000476217 SART1O43290 800 aaKnown RBP8.23□□□□□ -1.09
SSR3-206ENST00000476217 WISP1O95388 367 aa8.23□□□□□ -1.09
SSR3-206ENST00000476217 H2AFB1P0C5Y9 115 aa8.23□□□□□ -1.09
SSR3-206ENST00000476217 H2AFB2P0C5Z0 115 aa8.23□□□□□ -1.09
SSR3-206ENST00000476217 FAAP100Q0VG06 881 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms