RNA–Protein interactions for RNA: ENST00000473257.1

ACTB-209, Transcript of actin beta, humanhuman

TSL 3

Gene ACTB, Length 556 nt, Biotype processed transcript, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-209ENST00000473257 PPP2R3BQ9Y5P8 575 aa14.17□□□□□ -0.14
ACTB-209ENST00000473257 ZBTB48P10074 688 aaPredicted RBP14.16□□□□□ -0.14
ACTB-209ENST00000473257 IREB2P48200 963 aaKnown RBP14.16□□□□□ -0.14
ACTB-209ENST00000473257 UBE4AQ14139 1066 aa14.16□□□□□ -0.14
ACTB-209ENST00000473257 NOM1Q5C9Z4 860 aaKnown RBP14.16□□□□□ -0.14
ACTB-209ENST00000473257 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.16□□□□□ -0.14
ACTB-209ENST00000473257 OPTNQ96CV9 577 aa14.16□□□□□ -0.14
ACTB-209ENST00000473257 ECM2O94769 699 aaPredicted RBP14.15□□□□□ -0.14
ACTB-209ENST00000473257 ALDH1A1P00352 501 aa14.15□□□□□ -0.14
ACTB-209ENST00000473257 BCAMP50895 628 aa14.15□□□□□ -0.14
ACTB-209ENST00000473257 METTL24Q5JXM2 366 aa14.15□□□□□ -0.14
ACTB-209ENST00000473257 PRPF38BQ5VTL8 546 aaKnown RBP14.15□□□□□ -0.14
ACTB-209ENST00000473257 ANKRD13AQ8IZ07 590 aa14.15□□□□□ -0.14
ACTB-209ENST00000473257 MRPL50Q8N5N7 158 aaKnown RBP14.15□□□□□ -0.14
ACTB-209ENST00000473257 BRI3BPQ8WY22 251 aa14.15□□□□□ -0.14
ACTB-209ENST00000473257 VGLL4Q14135 290 aa14.14□□□□□ -0.15
ACTB-209ENST00000473257 FBXO33Q7Z6M2 555 aa14.14□□□□□ -0.15
ACTB-209ENST00000473257 MS4A4AQ96JQ5 239 aa14.14□□□□□ -0.15
ACTB-209ENST00000473257 SERPINA10Q9UK55 444 aa14.14□□□□□ -0.15
ACTB-209ENST00000473257 ZNF316A6NFI3 1004 aaPredicted RBP14.13□□□□□ -0.15
ACTB-209ENST00000473257 MYCP01106 439 aaPredicted RBP14.13□□□□□ -0.15
ACTB-209ENST00000473257 INHBEP58166 350 aa14.13□□□□□ -0.15
ACTB-209ENST00000473257 VPS37DQ86XT2 251 aa14.13□□□□□ -0.15
ACTB-209ENST00000473257 OTUD5Q96G74 571 aa14.13□□□□□ -0.15
ACTB-209ENST00000473257 FRAT2O75474 233 aaPredicted RBP14.12□□□□□ -0.15
ACTB-209ENST00000473257 RABL6Q3YEC7 729 aaPredicted RBP14.12□□□□□ -0.15
ACTB-209ENST00000473257 FAM43AQ8N2R8 423 aa14.12□□□□□ -0.15
ACTB-209ENST00000473257 VGLL2Q8N8G2 317 aa14.12□□□□□ -0.15
ACTB-209ENST00000473257 SSH1Q8WYL5 1049 aa14.12□□□□□ -0.15
ACTB-209ENST00000473257 ZKSCAN4Q969J2 545 aaPredicted RBP14.12□□□□□ -0.15
ACTB-209ENST00000473257 PTPN22Q9Y2R2 807 aa14.12□□□□□ -0.15
ACTB-209ENST00000473257 ARAP2Q8WZ64 1704 aa14.12□□□□□ -0.15
ACTB-209ENST00000473257 UTYO14607 1347 aa14.12□□□□□ -0.15
ACTB-209ENST00000473257 MROH5Q6ZUA9 1318 aa14.12□□□□□ -0.15
ACTB-209ENST00000473257 ZNF521Q96K83 1311 aa14.12□□□□□ -0.15
ACTB-209ENST00000473257 CEP290O15078 2479 aa14.12□□□□□ -0.15
ACTB-209ENST00000473257 ZSWIM8A7E2V4 1837 aa14.11□□□□□ -0.15
ACTB-209ENST00000473257 CCL15-CCL14A0A0B4J2E2 113 aa14.11□□□□□ -0.15
ACTB-209ENST00000473257 TESPA1A2RU30 521 aaPredicted RBP14.11□□□□□ -0.15
ACTB-209ENST00000473257 EN2P19622 333 aaPredicted RBP14.11□□□□□ -0.15
ACTB-209ENST00000473257 MAP3K9P80192 1104 aa14.11□□□□□ -0.15
ACTB-209ENST00000473257 SP3Q02447 781 aa14.11□□□□□ -0.15
ACTB-209ENST00000473257 TNFAIP1Q13829 316 aa14.11□□□□□ -0.15
ACTB-209ENST00000473257 CCL15Q16663 113 aa14.11□□□□□ -0.15
ACTB-209ENST00000473257 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.11□□□□□ -0.15
ACTB-209ENST00000473257 ARHGAP39Q9C0H5 1083 aa14.11□□□□□ -0.15
ACTB-209ENST00000473257 EFCC1Q9HA90 598 aa14.11□□□□□ -0.15
ACTB-209ENST00000473257 LAMB1P07942 1786 aa14.1□□□□□ -0.15
ACTB-209ENST00000473257 PDE8BO95263 885 aa14.1□□□□□ -0.15
ACTB-209ENST00000473257 TAF1CQ15572 869 aaPredicted RBP14.1□□□□□ -0.15
ACTB-209ENST00000473257 ERO1AQ96HE7 468 aa14.1□□□□□ -0.15
ACTB-209ENST00000473257 USP44Q9H0E7 712 aa14.1□□□□□ -0.15
ACTB-209ENST00000473257 SNCAIPQ9Y6H5 919 aa14.1□□□□□ -0.15
ACTB-209ENST00000473257 CAVIN4Q5BKX8 364 aa14.09□□□□□ -0.15
ACTB-209ENST00000473257 OTUD7BQ6GQQ9 843 aa14.09□□□□□ -0.15
ACTB-209ENST00000473257 APOBEC3HQ6NTF7 200 aaKnown RBP14.09□□□□□ -0.15
ACTB-209ENST00000473257 MIGA2Q7L4E1 593 aa14.09□□□□□ -0.15
ACTB-209ENST00000473257 TEKT1Q969V4 418 aa14.09□□□□□ -0.15
ACTB-209ENST00000473257 CDCA7LQ96GN5 454 aa14.09□□□□□ -0.15
ACTB-209ENST00000473257 UNCXA6NJT0 531 aa14.08□□□□□ -0.16
ACTB-209ENST00000473257 FGFR2P21802 821 aa14.08□□□□□ -0.16
ACTB-209ENST00000473257 RFX5P48382 616 aaPredicted RBP14.08□□□□□ -0.16
ACTB-209ENST00000473257 WRNIP1Q96S55 665 aa14.08□□□□□ -0.16
ACTB-209ENST00000473257 SIL1Q9H173 461 aa14.08□□□□□ -0.16
ACTB-209ENST00000473257 CSADQ9Y600 493 aa14.08□□□□□ -0.16
ACTB-209ENST00000473257 PTCH2Q9Y6C5 1203 aa14.08□□□□□ -0.16
ACTB-209ENST00000473257 BTBD19C9JJ37 291 aa14.07□□□□□ -0.16
ACTB-209ENST00000473257 INPP5BP32019 993 aa14.07□□□□□ -0.16
ACTB-209ENST00000473257 TNNI2P48788 182 aa14.07□□□□□ -0.16
ACTB-209ENST00000473257 TCP10Q12799 353 aa14.07□□□□□ -0.16
ACTB-209ENST00000473257 DIXDC1Q155Q3 683 aa14.07□□□□□ -0.16
ACTB-209ENST00000473257 ZDHHC15Q96MV8 337 aa14.07□□□□□ -0.16
ACTB-209ENST00000473257 SPDYE5A6NIY4 337 aa14.06□□□□□ -0.16
ACTB-209ENST00000473257 IRF6O14896 467 aa14.06□□□□□ -0.16
ACTB-209ENST00000473257 SLURP2P0DP57 97 aa14.06□□□□□ -0.16
ACTB-209ENST00000473257 GTF2A2P52657 109 aa14.06□□□□□ -0.16
ACTB-209ENST00000473257 PUM3Q15397 648 aaKnown RBP14.06□□□□□ -0.16
ACTB-209ENST00000473257 ATG9AQ7Z3C6 839 aa14.06□□□□□ -0.16
ACTB-209ENST00000473257 SH3TC2Q8TF17 1288 aa14.06□□□□□ -0.16
ACTB-209ENST00000473257 TBC1D22AQ8WUA7 517 aa14.06□□□□□ -0.16
ACTB-209ENST00000473257 ARMC5Q96C12 935 aa14.06□□□□□ -0.16
ACTB-209ENST00000473257 ZFYVE28Q9HCC9 887 aa14.06□□□□□ -0.16
ACTB-209ENST00000473257 EYA2O00167 538 aa14.05□□□□□ -0.16
ACTB-209ENST00000473257 IFIT1P09914 478 aaKnown RBP14.05□□□□□ -0.16
ACTB-209ENST00000473257 HDLBPQ00341 1268 aaKnown RBP14.05□□□□□ -0.16
ACTB-209ENST00000473257 NFIAQ12857 509 aa14.05□□□□□ -0.16
ACTB-209ENST00000473257 ZFPM1Q8IX07 1006 aa14.05□□□□□ -0.16
ACTB-209ENST00000473257 TMOD2Q9NZR1 351 aa14.05□□□□□ -0.16
ACTB-209ENST00000473257 CTGFP29279 349 aa14.04□□□□□ -0.16
ACTB-209ENST00000473257 PRDX5P30044 214 aa14.04□□□□□ -0.16
ACTB-209ENST00000473257 SLFN5Q08AF3 891 aa14.04□□□□□ -0.16
ACTB-209ENST00000473257 CDC42EP5Q6NZY7 148 aa14.04□□□□□ -0.16
ACTB-209ENST00000473257 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.04□□□□□ -0.16
ACTB-209ENST00000473257 ZNF333Q96JL9 665 aa14.04□□□□□ -0.16
ACTB-209ENST00000473257 CPA4Q9UI42 421 aa14.04□□□□□ -0.16
ACTB-209ENST00000473257 PA2G4Q9UQ80 394 aaKnown RBP14.04□□□□□ -0.16
ACTB-209ENST00000473257 DAGLAQ9Y4D2 1042 aa14.04□□□□□ -0.16
ACTB-209ENST00000473257 PTPRCP08575 1304 aa14.04□□□□□ -0.16
ACTB-209ENST00000473257 CETPP11597 493 aa14.03□□□□□ -0.16
ACTB-209ENST00000473257 SLC5A1P13866 664 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms