RNA–Protein interactions for RNA: ENST00000472217.1

USF1-204, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 1,097 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-204ENST00000472217 DZIP1LQ8IYY4 767 aaKnown RBP11.25□□□□□ -0.61
USF1-204ENST00000472217 TBC1D22AQ8WUA7 517 aa11.25□□□□□ -0.61
USF1-204ENST00000472217 TDRD3Q9H7E2 651 aaKnown RBP11.25□□□□□ -0.61
USF1-204ENST00000472217 RNF186Q9NXI6 227 aa11.25□□□□□ -0.61
USF1-204ENST00000472217 ZNF70Q9UC06 446 aaPredicted RBP11.25□□□□□ -0.61
USF1-204ENST00000472217 ANGEL1Q9UNK9 670 aaKnown RBP11.25□□□□□ -0.61
USF1-204ENST00000472217 AKAP11Q9UKA4 1901 aa11.25□□□□□ -0.61
USF1-204ENST00000472217 TRPA1O75762 1119 aa11.24□□□□□ -0.61
USF1-204ENST00000472217 IL15P40933 162 aaPredicted RBP11.24□□□□□ -0.61
USF1-204ENST00000472217 RASA3Q14644 834 aa11.24□□□□□ -0.61
USF1-204ENST00000472217 ATP2B3Q16720 1220 aa11.24□□□□□ -0.61
USF1-204ENST00000472217 LDLRAD1Q5T700 205 aa11.24□□□□□ -0.61
USF1-204ENST00000472217 NBPF12Q5TAG4 269 aaPredicted RBP11.24□□□□□ -0.61
USF1-204ENST00000472217 CLUAP1Q96AJ1 413 aa11.24□□□□□ -0.61
USF1-204ENST00000472217 COPRSQ9NQ92 184 aa11.24□□□□□ -0.61
USF1-204ENST00000472217 CEP126Q9P2H0 1117 aa11.24□□□□□ -0.61
USF1-204ENST00000472217 OTOFQ9HC10 1997 aa11.23□□□□□ -0.61
USF1-204ENST00000472217 HDLBPQ00341 1268 aaKnown RBP11.23□□□□□ -0.61
USF1-204ENST00000472217 MKRN3Q13064 507 aaKnown RBP11.23□□□□□ -0.61
USF1-204ENST00000472217 MTX1Q13505 466 aa11.23□□□□□ -0.61
USF1-204ENST00000472217 TNFAIP1Q13829 316 aa11.23□□□□□ -0.61
USF1-204ENST00000472217 MAP3K11Q16584 847 aa11.23□□□□□ -0.61
USF1-204ENST00000472217 REM2Q8IYK8 340 aaPredicted RBP11.23□□□□□ -0.61
USF1-204ENST00000472217 ABHD8Q96I13 439 aa11.23□□□□□ -0.61
USF1-204ENST00000472217 LAMB1P07942 1786 aa11.23□□□□□ -0.61
USF1-204ENST00000472217 CASP8AP2Q9UKL3 1982 aa11.23□□□□□ -0.61
USF1-204ENST00000472217 TCP10L2B9ZVM9 353 aa11.22□□□□□ -0.61
USF1-204ENST00000472217 SRGAP3O43295 1099 aa11.22□□□□□ -0.61
USF1-204ENST00000472217 PPP1R12BO60237 982 aaPredicted RBP11.22□□□□□ -0.61
USF1-204ENST00000472217 MAST3O60307 1309 aa11.22□□□□□ -0.61
USF1-204ENST00000472217 SUPT20HL1Q3ZLR7 823 aa11.22□□□□□ -0.61
USF1-204ENST00000472217 CDAN1Q8IWY9 1227 aa11.22□□□□□ -0.61
USF1-204ENST00000472217 TEKT1Q969V4 418 aa11.22□□□□□ -0.61
USF1-204ENST00000472217 CLMNQ96JQ2 1002 aa11.22□□□□□ -0.61
USF1-204ENST00000472217 SUGT1Q9Y2Z0 365 aa11.22□□□□□ -0.61
USF1-204ENST00000472217 ZBED9Q6R2W3 1325 aa11.21□□□□□ -0.61
USF1-204ENST00000472217 ADORA1P30542 326 aa11.21□□□□□ -0.61
USF1-204ENST00000472217 PHKA1P46020 1223 aa11.21□□□□□ -0.61
USF1-204ENST00000472217 CACNB3P54284 484 aa11.21□□□□□ -0.61
USF1-204ENST00000472217 SPRYD7Q5W111 196 aa11.21□□□□□ -0.61
USF1-204ENST00000472217 ZKSCAN2Q63HK3 967 aa11.21□□□□□ -0.61
USF1-204ENST00000472217 TMEM57Q8N5G2 664 aa11.21□□□□□ -0.61
USF1-204ENST00000472217 WDR66Q8TBY9 1149 aa11.21□□□□□ -0.61
USF1-204ENST00000472217 ZDHHC15Q96MV8 337 aa11.21□□□□□ -0.61
USF1-204ENST00000472217 TEPSINQ96N21 525 aa11.21□□□□□ -0.61
USF1-204ENST00000472217 TMEM39BQ9GZU3 492 aa11.21□□□□□ -0.61
USF1-204ENST00000472217 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.21□□□□□ -0.61
USF1-204ENST00000472217 USP2O75604 605 aaPredicted RBP11.2□□□□□ -0.62
USF1-204ENST00000472217 GNAI2P04899 355 aa11.2□□□□□ -0.62
USF1-204ENST00000472217 PRDX5P30044 214 aa11.2□□□□□ -0.62
USF1-204ENST00000472217 IREB2P48200 963 aaKnown RBP11.2□□□□□ -0.62
USF1-204ENST00000472217 TM4SF4P48230 202 aa11.2□□□□□ -0.62
USF1-204ENST00000472217 TNNI2P48788 182 aa11.2□□□□□ -0.62
USF1-204ENST00000472217 TFCP2Q12800 502 aa11.2□□□□□ -0.62
USF1-204ENST00000472217 DGKZQ13574 1117 aa11.2□□□□□ -0.62
USF1-204ENST00000472217 APOBEC3HQ6NTF7 200 aaKnown RBP11.2□□□□□ -0.62
USF1-204ENST00000472217 HHIPL2Q6UWX4 724 aa11.2□□□□□ -0.62
USF1-204ENST00000472217 SLC10A4Q96EP9 437 aa11.2□□□□□ -0.62
USF1-204ENST00000472217 MRIQ9BWK5 157 aa11.2□□□□□ -0.62
USF1-204ENST00000472217 MCOLN1Q9GZU1 580 aa11.2□□□□□ -0.62
USF1-204ENST00000472217 GNL3LQ9NVN8 582 aaKnown RBP11.2□□□□□ -0.62
USF1-204ENST00000472217 PNMA6EA0A0J9YXQ4 647 aa11.19□□□□□ -0.62
USF1-204ENST00000472217 UNCXA6NJT0 531 aa11.19□□□□□ -0.62
USF1-204ENST00000472217 SEMA3EO15041 775 aa11.19□□□□□ -0.62
USF1-204ENST00000472217 TBC1D8O95759 1140 aa11.19□□□□□ -0.62
USF1-204ENST00000472217 ZBTB48P10074 688 aaPredicted RBP11.19□□□□□ -0.62
USF1-204ENST00000472217 KCNA4P22459 653 aa11.19□□□□□ -0.62
USF1-204ENST00000472217 TIMM10P62072 90 aa11.19□□□□□ -0.62
USF1-204ENST00000472217 SREBF2Q12772 1141 aa11.19□□□□□ -0.62
USF1-204ENST00000472217 DIXDC1Q155Q3 683 aa11.19□□□□□ -0.62
USF1-204ENST00000472217 CCDC102BQ68D86 513 aa11.19□□□□□ -0.62
USF1-204ENST00000472217 ANKRD13AQ8IZ07 590 aa11.19□□□□□ -0.62
USF1-204ENST00000472217 WNK4Q96J92 1243 aa11.19□□□□□ -0.62
USF1-204ENST00000472217 TMOD2Q9NZR1 351 aa11.19□□□□□ -0.62
USF1-204ENST00000472217 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.19□□□□□ -0.62
USF1-204ENST00000472217 SALL1Q9NSC2 1324 aa11.18□□□□□ -0.62
USF1-204ENST00000472217 A0A1B0GUL7 405 aa11.18□□□□□ -0.62
USF1-204ENST00000472217 LDHBP07195 334 aaKnown RBP11.18□□□□□ -0.62
USF1-204ENST00000472217 RASGRF1Q13972 1273 aa11.18□□□□□ -0.62
USF1-204ENST00000472217 DENND2AQ9ULE3 1009 aa11.18□□□□□ -0.62
USF1-204ENST00000472217 DAGLAQ9Y4D2 1042 aa11.18□□□□□ -0.62
USF1-204ENST00000472217 RPAP1Q9BWH6 1393 aaPredicted RBP11.17□□□□□ -0.62
USF1-204ENST00000472217 MANSC4A6NHS7 340 aaPredicted RBP11.17□□□□□ -0.62
USF1-204ENST00000472217 ZBTB22O15209 634 aa11.17□□□□□ -0.62
USF1-204ENST00000472217 RLBP1P12271 317 aa11.17□□□□□ -0.62
USF1-204ENST00000472217 GJA5P36382 358 aa11.17□□□□□ -0.62
USF1-204ENST00000472217 FKBP1CQ5VVH2 108 aa11.17□□□□□ -0.62
USF1-204ENST00000472217 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.17□□□□□ -0.62
USF1-204ENST00000472217 FAM83AQ86UY5 434 aa11.17□□□□□ -0.62
USF1-204ENST00000472217 FTSJ3Q8IY81 847 aaKnown RBP11.17□□□□□ -0.62
USF1-204ENST00000472217 XAGE2Q96GT9 111 aa11.17□□□□□ -0.62
USF1-204ENST00000472217 ELP3Q9H9T3 547 aa11.17□□□□□ -0.62
USF1-204ENST00000472217 AKAP2Q9Y2D5 859 aa11.17□□□□□ -0.62
USF1-204ENST00000472217 PDS5AQ29RF7 1337 aaKnown RBP11.16□□□□□ -0.62
USF1-204ENST00000472217 CCDC85CA6NKD9 419 aa11.16□□□□□ -0.62
USF1-204ENST00000472217 IGF2BP3O00425 579 aaKnown RBP eCLIP11.16□□□□□ -0.62
USF1-204ENST00000472217 INHBEP58166 350 aa11.16□□□□□ -0.62
USF1-204ENST00000472217 VGLL4Q14135 290 aa11.16□□□□□ -0.62
USF1-204ENST00000472217 POLA2Q14181 598 aa11.16□□□□□ -0.62
USF1-204ENST00000472217 MVPQ14764 893 aaKnown RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms