RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 IL17REQ8NFR9 667 aa8.96□□□□□ -0.98
HDAC3-206ENST00000471968 PPP2R3BQ9Y5P8 575 aa8.96□□□□□ -0.98
HDAC3-206ENST00000471968 NUP98P52948 1817 aa8.96□□□□□ -0.98
HDAC3-206ENST00000471968 UNC79Q9P2D8 2635 aa8.95□□□□□ -0.98
HDAC3-206ENST00000471968 CHD6Q8TD26 2715 aa8.95□□□□□ -0.98
HDAC3-206ENST00000471968 RGS20O76081 388 aa8.95□□□□□ -0.98
HDAC3-206ENST00000471968 HMOX1P09601 288 aa8.95□□□□□ -0.98
HDAC3-206ENST00000471968 COL6A1P12109 1028 aa8.95□□□□□ -0.98
HDAC3-206ENST00000471968 IRF5Q13568 498 aa8.95□□□□□ -0.98
HDAC3-206ENST00000471968 ADGRE1Q14246 886 aa8.95□□□□□ -0.98
HDAC3-206ENST00000471968 CSPP1Q1MSJ5 1256 aa8.95□□□□□ -0.98
HDAC3-206ENST00000471968 OGDHLQ9ULD0 1010 aa8.95□□□□□ -0.98
HDAC3-206ENST00000471968 ANKRD11Q6UB99 2663 aaPredicted RBP8.94□□□□□ -0.98
HDAC3-206ENST00000471968 OTOFQ9HC10 1997 aa8.94□□□□□ -0.98
HDAC3-206ENST00000471968 GFRA3O60609 400 aa8.94□□□□□ -0.98
HDAC3-206ENST00000471968 DACT2Q5SW24 774 aa8.94□□□□□ -0.98
HDAC3-206ENST00000471968 TIFAQ96CG3 184 aa8.94□□□□□ -0.98
HDAC3-206ENST00000471968 RNPC3Q96LT9 517 aaKnown RBP8.94□□□□□ -0.98
HDAC3-206ENST00000471968 HMX1Q9NP08 348 aaPredicted RBP8.94□□□□□ -0.98
HDAC3-206ENST00000471968 CHD9Q3L8U1 2897 aa8.94□□□□□ -0.98
HDAC3-206ENST00000471968 LAMB2P55268 1798 aa8.94□□□□□ -0.98
HDAC3-206ENST00000471968 MYO15AQ9UKN7 3530 aa8.93□□□□□ -0.98
HDAC3-206ENST00000471968 CLRN2A0PK11 232 aa8.93□□□□□ -0.98
HDAC3-206ENST00000471968 PDHXO00330 501 aa8.93□□□□□ -0.98
HDAC3-206ENST00000471968 TNPO2O14787 897 aaKnown RBP8.93□□□□□ -0.98
HDAC3-206ENST00000471968 IL13P35225 146 aa8.93□□□□□ -0.98
HDAC3-206ENST00000471968 SNAPC2Q13487 334 aa8.93□□□□□ -0.98
HDAC3-206ENST00000471968 KIAA0825Q8IV33 1275 aa8.93□□□□□ -0.98
HDAC3-206ENST00000471968 MICALL1Q8N3F8 863 aa8.93□□□□□ -0.98
HDAC3-206ENST00000471968 MTMR14Q8NCE2 650 aa8.93□□□□□ -0.98
HDAC3-206ENST00000471968 ZBED3Q96IU2 234 aaPredicted RBP8.93□□□□□ -0.98
HDAC3-206ENST00000471968 VEZTQ9HBM0 779 aa8.93□□□□□ -0.98
HDAC3-206ENST00000471968 ANKIB1Q9P2G1 1089 aa8.93□□□□□ -0.98
HDAC3-206ENST00000471968 GGA1Q9UJY5 639 aa8.93□□□□□ -0.98
HDAC3-206ENST00000471968 CSADQ9Y600 493 aa8.93□□□□□ -0.98
HDAC3-206ENST00000471968 ZNF804BA4D1E1 1349 aa8.93□□□□□ -0.98
HDAC3-206ENST00000471968 ANKRD36CQ5JPF3 1778 aa8.93□□□□□ -0.98
HDAC3-206ENST00000471968 PSME4Q14997 1843 aa8.93□□□□□ -0.98
HDAC3-206ENST00000471968 MYO3BQ8WXR4 1341 aa8.92□□□□□ -0.98
HDAC3-206ENST00000471968 SPDYE5A6NIY4 337 aa8.92□□□□□ -0.98
HDAC3-206ENST00000471968 IRF6O14896 467 aa8.92□□□□□ -0.98
HDAC3-206ENST00000471968 MAP3K9P80192 1104 aa8.92□□□□□ -0.98
HDAC3-206ENST00000471968 TRIM32Q13049 653 aa8.92□□□□□ -0.98
HDAC3-206ENST00000471968 SKIV2LQ15477 1246 aaKnown RBP8.92□□□□□ -0.98
HDAC3-206ENST00000471968 GIGYF2Q6Y7W6 1299 aaKnown RBP8.92□□□□□ -0.98
HDAC3-206ENST00000471968 RIC3Q7Z5B4 369 aa8.92□□□□□ -0.98
HDAC3-206ENST00000471968 BADQ92934 168 aa8.92□□□□□ -0.98
HDAC3-206ENST00000471968 SETXQ7Z333 2677 aaKnown RBP8.91□□□□□ -0.98
HDAC3-206ENST00000471968 PTPRZ1P23471 2315 aaPredicted RBP8.91□□□□□ -0.98
HDAC3-206ENST00000471968 GNAT3A8MTJ3 354 aa8.91□□□□□ -0.98
HDAC3-206ENST00000471968 HMGCRP04035 888 aa8.91□□□□□ -0.98
HDAC3-206ENST00000471968 BCRP11274 1271 aa8.91□□□□□ -0.98
HDAC3-206ENST00000471968 MYL6BP14649 208 aa8.91□□□□□ -0.98
HDAC3-206ENST00000471968 DLGAP5Q15398 846 aa8.91□□□□□ -0.98
HDAC3-206ENST00000471968 ANKS1AQ92625 1134 aa8.91□□□□□ -0.98
HDAC3-206ENST00000471968 CD320Q9NPF0 282 aa8.91□□□□□ -0.98
HDAC3-206ENST00000471968 PRDM5Q9NQX1 630 aaPredicted RBP8.91□□□□□ -0.98
HDAC3-206ENST00000471968 PODXL2Q9NZ53 605 aa8.91□□□□□ -0.98
HDAC3-206ENST00000471968 RRP7AQ9Y3A4 280 aaKnown RBP8.91□□□□□ -0.98
HDAC3-206ENST00000471968 SIPA1L3O60292 1781 aaPredicted RBP8.91□□□□□ -0.98
HDAC3-206ENST00000471968 COL4A1P02462 1669 aa8.91□□□□□ -0.98
HDAC3-206ENST00000471968 LTBP2Q14767 1821 aa8.9□□□□□ -0.98
HDAC3-206ENST00000471968 TLL1O43897 1013 aa8.9□□□□□ -0.98
HDAC3-206ENST00000471968 ATN1P54259 1190 aaPredicted RBP8.9□□□□□ -0.98
HDAC3-206ENST00000471968 RASA3Q14644 834 aa8.9□□□□□ -0.98
HDAC3-206ENST00000471968 ANKRD23Q86SG2 305 aa8.9□□□□□ -0.98
HDAC3-206ENST00000471968 SENP6Q9GZR1 1112 aaPredicted RBP8.9□□□□□ -0.98
HDAC3-206ENST00000471968 PCDHAC2Q9Y5I4 1007 aa8.9□□□□□ -0.98
HDAC3-206ENST00000471968 CHD7Q9P2D1 2997 aa8.9□□□□□ -0.99
HDAC3-206ENST00000471968 TPRP12270 2363 aaKnown RBP8.9□□□□□ -0.99
HDAC3-206ENST00000471968 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.89□□□□□ -0.99
HDAC3-206ENST00000471968 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.89□□□□□ -0.99
HDAC3-206ENST00000471968 ERC2O15083 957 aa8.89□□□□□ -0.99
HDAC3-206ENST00000471968 CYP2C8P10632 490 aa8.89□□□□□ -0.99
HDAC3-206ENST00000471968 MMP14P50281 582 aa8.89□□□□□ -0.99
HDAC3-206ENST00000471968 STRIP1Q5VSL9 837 aa8.89□□□□□ -0.99
HDAC3-206ENST00000471968 ERO1BQ86YB8 467 aa8.89□□□□□ -0.99
HDAC3-206ENST00000471968 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.89□□□□□ -0.99
HDAC3-206ENST00000471968 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.89□□□□□ -0.99
HDAC3-206ENST00000471968 ZNF428Q96B54 188 aa8.89□□□□□ -0.99
HDAC3-206ENST00000471968 PARK7Q99497 189 aaKnown RBP8.89□□□□□ -0.99
HDAC3-206ENST00000471968 TRMT112Q9UI30 125 aaKnown RBP8.89□□□□□ -0.99
HDAC3-206ENST00000471968 MGAMO43451 1857 aa8.89□□□□□ -0.99
HDAC3-206ENST00000471968 MYO9BQ13459 2157 aa8.89□□□□□ -0.99
HDAC3-206ENST00000471968 SH3TC1Q8TE82 1336 aa8.88□□□□□ -0.99
HDAC3-206ENST00000471968 MYO1BO43795 1136 aa8.88□□□□□ -0.99
HDAC3-206ENST00000471968 CDAN1Q8IWY9 1227 aa8.88□□□□□ -0.99
HDAC3-206ENST00000471968 CNTNAP3BQ96NU0 1288 aa8.88□□□□□ -0.99
HDAC3-206ENST00000471968 CNTNAP3Q9BZ76 1288 aa8.88□□□□□ -0.99
HDAC3-206ENST00000471968 KCNH4Q9UQ05 1017 aa8.88□□□□□ -0.99
HDAC3-206ENST00000471968 SNCAIPQ9Y6H5 919 aa8.88□□□□□ -0.99
HDAC3-206ENST00000471968 DNAH14Q0VDD8 3507 aa8.88□□□□□ -0.99
HDAC3-206ENST00000471968 DMDP11532 3685 aa8.88□□□□□ -0.99
HDAC3-206ENST00000471968 NCOR2Q9Y618 2525 aa8.88□□□□□ -0.99
HDAC3-206ENST00000471968 CEMIPQ8WUJ3 1361 aa8.87□□□□□ -0.99
HDAC3-206ENST00000471968 MAST2Q6P0Q8 1798 aa8.87□□□□□ -0.99
HDAC3-206ENST00000471968 PBX2P40425 430 aa8.87□□□□□ -0.99
HDAC3-206ENST00000471968 ID4P47928 161 aa8.87□□□□□ -0.99
HDAC3-206ENST00000471968 RTP1P59025 263 aa8.87□□□□□ -0.99
HDAC3-206ENST00000471968 RPS8P62241 208 aaKnown RBP8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms