RNA–Protein interactions for RNA: ENST00000471667.5

LRCH3-213, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 586 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-213ENST00000471667 NOD1Q9Y239 953 aa5.5□□□□□ -1.53
LRCH3-213ENST00000471667 SBF2Q86WG5 1849 aa5.5□□□□□ -1.53
LRCH3-213ENST00000471667 LRRC37A3O60309 1634 aa5.49□□□□□ -1.53
LRCH3-213ENST00000471667 COL24A1Q17RW2 1714 aa5.49□□□□□ -1.53
LRCH3-213ENST00000471667 QSER1Q2KHR3 1735 aa5.49□□□□□ -1.53
LRCH3-213ENST00000471667 TMEM88BA6NKF7 163 aa5.49□□□□□ -1.53
LRCH3-213ENST00000471667 EFSO43281 561 aa5.49□□□□□ -1.53
LRCH3-213ENST00000471667 TXLNAP40222 546 aa5.49□□□□□ -1.53
LRCH3-213ENST00000471667 ECE1P42892 770 aa5.49□□□□□ -1.53
LRCH3-213ENST00000471667 CHRNA4P43681 627 aa5.49□□□□□ -1.53
LRCH3-213ENST00000471667 SOX10P56693 466 aa5.49□□□□□ -1.53
LRCH3-213ENST00000471667 TGFB2P61812 414 aa5.49□□□□□ -1.53
LRCH3-213ENST00000471667 COL23A1Q86Y22 540 aaPredicted RBP5.49□□□□□ -1.53
LRCH3-213ENST00000471667 ZDHHC1Q8WTX9 485 aa5.49□□□□□ -1.53
LRCH3-213ENST00000471667 ZNF358Q9NW07 568 aa5.49□□□□□ -1.53
LRCH3-213ENST00000471667 MARK1Q9P0L2 795 aa5.49□□□□□ -1.53
LRCH3-213ENST00000471667 SCHIP1Q9P0W5 487 aaPredicted RBP5.49□□□□□ -1.53
LRCH3-213ENST00000471667 COG6Q9Y2V7 657 aa5.49□□□□□ -1.53
LRCH3-213ENST00000471667 CPDO75976 1380 aa5.49□□□□□ -1.53
LRCH3-213ENST00000471667 COL5A2P05997 1499 aaPredicted RBP5.49□□□□□ -1.53
LRCH3-213ENST00000471667 ABCC11Q96J66 1382 aa5.48□□□□□ -1.53
LRCH3-213ENST00000471667 LZTS3O60299 673 aaPredicted RBP5.48□□□□□ -1.53
LRCH3-213ENST00000471667 LAMC2Q13753 1193 aa5.48□□□□□ -1.53
LRCH3-213ENST00000471667 NCOA4Q13772 614 aa5.48□□□□□ -1.53
LRCH3-213ENST00000471667 DEFB115Q30KQ5 88 aa5.48□□□□□ -1.53
LRCH3-213ENST00000471667 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.48□□□□□ -1.53
LRCH3-213ENST00000471667 NFATC2IPQ8NCF5 419 aa5.48□□□□□ -1.53
LRCH3-213ENST00000471667 ALG2Q9H553 416 aa5.48□□□□□ -1.53
LRCH3-213ENST00000471667 CCNL1Q9UK58 526 aaPredicted RBP5.48□□□□□ -1.53
LRCH3-213ENST00000471667 TRPM1Q7Z4N2 1603 aa5.48□□□□□ -1.53
LRCH3-213ENST00000471667 AKAP12Q02952 1782 aa5.47□□□□□ -1.53
LRCH3-213ENST00000471667 ALS2Q96Q42 1657 aa5.47□□□□□ -1.53
LRCH3-213ENST00000471667 GLTPD2A6NH11 291 aa5.47□□□□□ -1.53
LRCH3-213ENST00000471667 EPHA4P54764 986 aa5.47□□□□□ -1.53
LRCH3-213ENST00000471667 TEAD4Q15561 434 aa5.47□□□□□ -1.53
LRCH3-213ENST00000471667 NUTM2GQ5VZR2 741 aa5.47□□□□□ -1.53
LRCH3-213ENST00000471667 L3MBTL2Q969R5 705 aa5.47□□□□□ -1.53
LRCH3-213ENST00000471667 TRIM11Q96F44 468 aa5.47□□□□□ -1.53
LRCH3-213ENST00000471667 POGKQ9P215 609 aa5.47□□□□□ -1.53
LRCH3-213ENST00000471667 NSD3Q9BZ95 1437 aa5.47□□□□□ -1.53
LRCH3-213ENST00000471667 WDR33Q9C0J8 1336 aaKnown RBP5.47□□□□□ -1.53
LRCH3-213ENST00000471667 NUP155O75694 1391 aa5.46□□□□□ -1.54
LRCH3-213ENST00000471667 PLEKHH1Q9ULM0 1364 aa5.46□□□□□ -1.54
LRCH3-213ENST00000471667 PHRF1Q9P1Y6 1649 aaKnown RBP5.46□□□□□ -1.54
LRCH3-213ENST00000471667 ELOA3CA0A087WX78 387 aaPredicted RBP5.46□□□□□ -1.54
LRCH3-213ENST00000471667 ELOA3DA6NLF2 546 aaPredicted RBP5.46□□□□□ -1.54
LRCH3-213ENST00000471667 USP17L5A8MUK1 530 aa5.46□□□□□ -1.54
LRCH3-213ENST00000471667 NOS2P35228 1153 aa5.46□□□□□ -1.54
LRCH3-213ENST00000471667 FXR1P51114 621 aaKnown RBP eCLIP5.46□□□□□ -1.54
LRCH3-213ENST00000471667 ELOA3BQ3SY89 546 aa5.46□□□□□ -1.54
LRCH3-213ENST00000471667 TBCELQ5QJ74 424 aa5.46□□□□□ -1.54
LRCH3-213ENST00000471667 LRRC69Q6ZNQ3 347 aa5.46□□□□□ -1.54
LRCH3-213ENST00000471667 NLRP13Q86W25 1043 aa5.46□□□□□ -1.54
LRCH3-213ENST00000471667 SLC9A9Q8IVB4 645 aa5.46□□□□□ -1.54
LRCH3-213ENST00000471667 DEPDC4Q8N2C3 294 aa5.46□□□□□ -1.54
LRCH3-213ENST00000471667 ABTB2Q8N961 1025 aa5.46□□□□□ -1.54
LRCH3-213ENST00000471667 ELOA3Q8NG57 546 aa5.46□□□□□ -1.54
LRCH3-213ENST00000471667 SYTL4Q96C24 671 aaPredicted RBP5.46□□□□□ -1.54
LRCH3-213ENST00000471667 PLVAPQ9BX97 442 aa5.46□□□□□ -1.54
LRCH3-213ENST00000471667 ABT1Q9ULW3 272 aaKnown RBP5.46□□□□□ -1.54
LRCH3-213ENST00000471667 E9PCH4 1651 aa5.46□□□□□ -1.54
LRCH3-213ENST00000471667 NHSQ6T4R5 1651 aa5.46□□□□□ -1.54
LRCH3-213ENST00000471667 WDR17Q8IZU2 1322 aa5.46□□□□□ -1.54
LRCH3-213ENST00000471667 TRPM3Q9HCF6 1732 aaPredicted RBP5.45□□□□□ -1.54
LRCH3-213ENST00000471667 CCDC7Q96M83 1385 aa5.45□□□□□ -1.54
LRCH3-213ENST00000471667 PIK3C2AO00443 1686 aa5.45□□□□□ -1.54
LRCH3-213ENST00000471667 EML1O00423 815 aa5.45□□□□□ -1.54
LRCH3-213ENST00000471667 SYT9Q86SS6 491 aa5.45□□□□□ -1.54
LRCH3-213ENST00000471667 Q8N3U1 123 aa5.45□□□□□ -1.54
LRCH3-213ENST00000471667 MDFIQ99750 246 aa5.45□□□□□ -1.54
LRCH3-213ENST00000471667 CARD10Q9BWT7 1032 aa5.45□□□□□ -1.54
LRCH3-213ENST00000471667 NEUROD4Q9HD90 331 aa5.45□□□□□ -1.54
LRCH3-213ENST00000471667 PIM2Q9P1W9 311 aa5.45□□□□□ -1.54
LRCH3-213ENST00000471667 ZNF232Q9UNY5 417 aa5.45□□□□□ -1.54
LRCH3-213ENST00000471667 GPC6Q9Y625 555 aaPredicted RBP5.45□□□□□ -1.54
LRCH3-213ENST00000471667 SERTM1A2A2V5 107 aa5.44□□□□□ -1.54
LRCH3-213ENST00000471667 RASSF10A6NK89 507 aa5.44□□□□□ -1.54
LRCH3-213ENST00000471667 SPATA31C1P0DKV0 1188 aa5.44□□□□□ -1.54
LRCH3-213ENST00000471667 ALAS2P22557 587 aa5.44□□□□□ -1.54
LRCH3-213ENST00000471667 SAFB2Q14151 953 aaKnown RBP eCLIP5.44□□□□□ -1.54
LRCH3-213ENST00000471667 DALRD3Q5D0E6 543 aaKnown RBP5.44□□□□□ -1.54
LRCH3-213ENST00000471667 SH3PXD2AQ5TCZ1 1133 aa5.44□□□□□ -1.54
LRCH3-213ENST00000471667 WWC1Q8IX03 1113 aa5.44□□□□□ -1.54
LRCH3-213ENST00000471667 C7orf43Q8WVR3 580 aa5.44□□□□□ -1.54
LRCH3-213ENST00000471667 POM121Q96HA1 1249 aa5.44□□□□□ -1.54
LRCH3-213ENST00000471667 CCDC87Q9NVE4 849 aa5.44□□□□□ -1.54
LRCH3-213ENST00000471667 IFT172Q9UG01 1749 aa5.43□□□□□ -1.54
LRCH3-213ENST00000471667 SPATA31E1Q6ZUB1 1445 aa5.43□□□□□ -1.54
LRCH3-213ENST00000471667 A0A0G2JLW4 131 aa5.43□□□□□ -1.54
LRCH3-213ENST00000471667 IQCA1LA6NCM1 817 aa5.43□□□□□ -1.54
LRCH3-213ENST00000471667 SIN3BO75182 1162 aa5.43□□□□□ -1.54
LRCH3-213ENST00000471667 GCP02774 474 aa5.43□□□□□ -1.54
LRCH3-213ENST00000471667 GATA4P43694 442 aa5.43□□□□□ -1.54
LRCH3-213ENST00000471667 SFSWAPQ12872 951 aaKnown RBP5.43□□□□□ -1.54
LRCH3-213ENST00000471667 GRM1Q13255 1194 aa5.43□□□□□ -1.54
LRCH3-213ENST00000471667 DOC2BQ14184 412 aa5.43□□□□□ -1.54
LRCH3-213ENST00000471667 LDHDQ86WU2 507 aa5.43□□□□□ -1.54
LRCH3-213ENST00000471667 TRIM50Q86XT4 487 aa5.43□□□□□ -1.54
LRCH3-213ENST00000471667 TPCN2Q8NHX9 752 aa5.43□□□□□ -1.54
LRCH3-213ENST00000471667 SLC30A3Q99726 388 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms