RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 TWISTNBQ3B726 338 aaPredicted RBP24.15■■□□□ 1.46
NCKIPSD-209ENST00000470006 CDAN1Q8IWY9 1227 aa24.15■■□□□ 1.46
NCKIPSD-209ENST00000470006 DNAAF4Q8WXU2 420 aa24.15■■□□□ 1.46
NCKIPSD-209ENST00000470006 ARHGAP39Q9C0H5 1083 aa24.15■■□□□ 1.46
NCKIPSD-209ENST00000470006 TMEM39BQ9GZU3 492 aa24.15■■□□□ 1.46
NCKIPSD-209ENST00000470006 FLIIQ13045 1269 aa24.14■■□□□ 1.45
NCKIPSD-209ENST00000470006 CNNM1Q9NRU3 951 aa24.14■■□□□ 1.45
NCKIPSD-209ENST00000470006 SERPINA10Q9UK55 444 aa24.14■■□□□ 1.45
NCKIPSD-209ENST00000470006 LDHAL6AQ6ZMR3 332 aa24.13■■□□□ 1.45
NCKIPSD-209ENST00000470006 DZIP1LQ8IYY4 767 aaKnown RBP24.13■■□□□ 1.45
NCKIPSD-209ENST00000470006 LINS1Q8NG48 757 aa24.13■■□□□ 1.45
NCKIPSD-209ENST00000470006 A0A1B0GUL6 1792 aa24.12■■□□□ 1.45
NCKIPSD-209ENST00000470006 CETPP11597 493 aa24.12■■□□□ 1.45
NCKIPSD-209ENST00000470006 LACTBP83111 547 aaPredicted RBP24.12■■□□□ 1.45
NCKIPSD-209ENST00000470006 ZNF594Q96JF6 807 aaPredicted RBP24.12■■□□□ 1.45
NCKIPSD-209ENST00000470006 TEPSINQ96N21 525 aa24.12■■□□□ 1.45
NCKIPSD-209ENST00000470006 TLR2O60603 784 aa24.11■■□□□ 1.45
NCKIPSD-209ENST00000470006 CCDC57Q2TAC2 916 aa24.11■■□□□ 1.45
NCKIPSD-209ENST00000470006 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.11■■□□□ 1.45
NCKIPSD-209ENST00000470006 ZSWIM8A7E2V4 1837 aa24.11■■□□□ 1.45
NCKIPSD-209ENST00000470006 SZT2Q5T011 3432 aa24.11■■□□□ 1.45
NCKIPSD-209ENST00000470006 FAM205AQ6ZU69 1335 aa24.1■■□□□ 1.45
NCKIPSD-209ENST00000470006 CRKP46108 304 aa24.1■■□□□ 1.45
NCKIPSD-209ENST00000470006 FOXO4P98177 505 aa24.1■■□□□ 1.45
NCKIPSD-209ENST00000470006 GNRH1P01148 92 aa24.09■■□□□ 1.45
NCKIPSD-209ENST00000470006 HIBADHP31937 336 aaKnown RBP24.09■■□□□ 1.45
NCKIPSD-209ENST00000470006 GYG1P46976 350 aa24.09■■□□□ 1.45
NCKIPSD-209ENST00000470006 LMBR1LQ6UX01 489 aa24.09■■□□□ 1.45
NCKIPSD-209ENST00000470006 RBM27Q9P2N5 1060 aaKnown RBP24.09■■□□□ 1.45
NCKIPSD-209ENST00000470006 SPDYE5A6NIY4 337 aa24.08■■□□□ 1.45
NCKIPSD-209ENST00000470006 BTBD19C9JJ37 291 aa24.08■■□□□ 1.45
NCKIPSD-209ENST00000470006 PRMT2P55345 433 aa24.08■■□□□ 1.45
NCKIPSD-209ENST00000470006 SNAPC2Q13487 334 aa24.08■■□□□ 1.45
NCKIPSD-209ENST00000470006 MTFR1Q15390 333 aa24.08■■□□□ 1.45
NCKIPSD-209ENST00000470006 ERO1BQ86YB8 467 aa24.08■■□□□ 1.45
NCKIPSD-209ENST00000470006 TDRD7Q8NHU6 1098 aaKnown RBP24.08■■□□□ 1.45
NCKIPSD-209ENST00000470006 WRNIP1Q96S55 665 aa24.07■■□□□ 1.44
NCKIPSD-209ENST00000470006 CACNB3P54284 484 aa24.06■■□□□ 1.44
NCKIPSD-209ENST00000470006 VPS37DQ86XT2 251 aa24.06■■□□□ 1.44
NCKIPSD-209ENST00000470006 RAET1EQ8TD07 263 aa24.06■■□□□ 1.44
NCKIPSD-209ENST00000470006 ZKSCAN4Q969J2 545 aaPredicted RBP24.06■■□□□ 1.44
NCKIPSD-209ENST00000470006 ZCCHC17Q9NP64 241 aaKnown RBP24.06■■□□□ 1.44
NCKIPSD-209ENST00000470006 BIN2Q9UBW5 565 aaPredicted RBP24.06■■□□□ 1.44
NCKIPSD-209ENST00000470006 SNCAIPQ9Y6H5 919 aa24.06■■□□□ 1.44
NCKIPSD-209ENST00000470006 ARAP2Q8WZ64 1704 aa24.06■■□□□ 1.44
NCKIPSD-209ENST00000470006 FRAT2O75474 233 aaPredicted RBP24.05■■□□□ 1.44
NCKIPSD-209ENST00000470006 FMNL1O95466 1100 aaPredicted RBP24.05■■□□□ 1.44
NCKIPSD-209ENST00000470006 HOXD10P28358 340 aa24.05■■□□□ 1.44
NCKIPSD-209ENST00000470006 PSMC4P43686 418 aa24.05■■□□□ 1.44
NCKIPSD-209ENST00000470006 CHAF1AQ13111 956 aaPredicted RBP24.05■■□□□ 1.44
NCKIPSD-209ENST00000470006 SLC17A8Q8NDX2 589 aa24.05■■□□□ 1.44
NCKIPSD-209ENST00000470006 NKX2-3Q8TAU0 364 aa24.05■■□□□ 1.44
NCKIPSD-209ENST00000470006 HTATIP2Q9BUP3 242 aa24.05■■□□□ 1.44
NCKIPSD-209ENST00000470006 TMOD2Q9NZR1 351 aa24.05■■□□□ 1.44
NCKIPSD-209ENST00000470006 CPA4Q9UI42 421 aa24.05■■□□□ 1.44
NCKIPSD-209ENST00000470006 IRF6O14896 467 aa24.04■■□□□ 1.44
NCKIPSD-209ENST00000470006 UBE4AQ14139 1066 aa24.04■■□□□ 1.44
NCKIPSD-209ENST00000470006 SHISA4Q96DD7 197 aa24.04■■□□□ 1.44
NCKIPSD-209ENST00000470006 IQSEC3Q9UPP2 1182 aaPredicted RBP24.04■■□□□ 1.44
NCKIPSD-209ENST00000470006 DLL1O00548 723 aa24.03■■□□□ 1.44
NCKIPSD-209ENST00000470006 PPIL2Q13356 520 aa24.03■■□□□ 1.44
NCKIPSD-209ENST00000470006 EPHA10Q5JZY3 1008 aa24.03■■□□□ 1.44
NCKIPSD-209ENST00000470006 HOOK2Q96ED9 719 aa24.03■■□□□ 1.44
NCKIPSD-209ENST00000470006 FAM84BQ96KN1 310 aaPredicted RBP24.03■■□□□ 1.44
NCKIPSD-209ENST00000470006 SRRDQ9UH36 339 aa24.03■■□□□ 1.44
NCKIPSD-209ENST00000470006 F6X3S4 739 aa24.02■■□□□ 1.44
NCKIPSD-209ENST00000470006 GRK4P32298 578 aa24.02■■□□□ 1.44
NCKIPSD-209ENST00000470006 TEKT1Q969V4 418 aa24.02■■□□□ 1.44
NCKIPSD-209ENST00000470006 PRKRIP1Q9H875 184 aaPredicted RBP24.02■■□□□ 1.44
NCKIPSD-209ENST00000470006 NR2E3Q9Y5X4 410 aa24.02■■□□□ 1.44
NCKIPSD-209ENST00000470006 CACNA1FO60840 1977 aa24.02■■□□□ 1.43
NCKIPSD-209ENST00000470006 DCAF15Q66K64 600 aa24.01■■□□□ 1.43
NCKIPSD-209ENST00000470006 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.01■■□□□ 1.43
NCKIPSD-209ENST00000470006 TRIM47Q96LD4 638 aa24.01■■□□□ 1.43
NCKIPSD-209ENST00000470006 RNF208Q9H0X6 261 aa24.01■■□□□ 1.43
NCKIPSD-209ENST00000470006 C9orf78Q9NZ63 289 aaPredicted RBP24.01■■□□□ 1.43
NCKIPSD-209ENST00000470006 RIPOR2Q9Y4F9 1068 aa24.01■■□□□ 1.43
NCKIPSD-209ENST00000470006 CCL5P13501 91 aa24■■□□□ 1.43
NCKIPSD-209ENST00000470006 OSBPP22059 807 aa24■■□□□ 1.43
NCKIPSD-209ENST00000470006 GRIK5Q16478 980 aa24■■□□□ 1.43
NCKIPSD-209ENST00000470006 C17orf99Q6UX52 265 aa24■■□□□ 1.43
NCKIPSD-209ENST00000470006 MYPNQ86TC9 1320 aa24■■□□□ 1.43
NCKIPSD-209ENST00000470006 RANBP2P49792 3224 aaKnown RBP24■■□□□ 1.43
NCKIPSD-209ENST00000470006 GJA8P48165 433 aa23.99■■□□□ 1.43
NCKIPSD-209ENST00000470006 UBXN2AP68543 259 aa23.99■■□□□ 1.43
NCKIPSD-209ENST00000470006 BEND3Q5T5X7 828 aa23.99■■□□□ 1.43
NCKIPSD-209ENST00000470006 MIGA2Q7L4E1 593 aa23.99■■□□□ 1.43
NCKIPSD-209ENST00000470006 WWC1Q8IX03 1113 aa23.99■■□□□ 1.43
NCKIPSD-209ENST00000470006 GRM8O00222 908 aa23.98■■□□□ 1.43
NCKIPSD-209ENST00000470006 PDHXO00330 501 aa23.98■■□□□ 1.43
NCKIPSD-209ENST00000470006 GJB1P08034 283 aa23.98■■□□□ 1.43
NCKIPSD-209ENST00000470006 CTGFP29279 349 aa23.98■■□□□ 1.43
NCKIPSD-209ENST00000470006 HDLBPQ00341 1268 aaKnown RBP23.98■■□□□ 1.43
NCKIPSD-209ENST00000470006 PPATQ06203 517 aa23.98■■□□□ 1.43
NCKIPSD-209ENST00000470006 TBC1D22AQ8WUA7 517 aa23.98■■□□□ 1.43
NCKIPSD-209ENST00000470006 ZNF341Q9BYN7 854 aa23.98■■□□□ 1.43
NCKIPSD-209ENST00000470006 CAVIN4Q5BKX8 364 aa23.97■■□□□ 1.43
NCKIPSD-209ENST00000470006 FAM83AQ86UY5 434 aa23.97■■□□□ 1.43
NCKIPSD-209ENST00000470006 PUS3Q9BZE2 481 aaKnown RBP23.97■■□□□ 1.43
NCKIPSD-209ENST00000470006 AK9Q5TCS8 1911 aa23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms