RNA–Protein interactions for RNA: ENST00000467272.6

UBR4-211, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-211ENST00000467272 TMEM39BQ9GZU3 492 aa15.52■□□□□ 0.08
UBR4-211ENST00000467272 TDRD3Q9H7E2 651 aaKnown RBP15.52■□□□□ 0.08
UBR4-211ENST00000467272 PTCH2Q9Y6C5 1203 aa15.52■□□□□ 0.08
UBR4-211ENST00000467272 TRIOBPQ9H2D6 2365 aa15.51■□□□□ 0.07
UBR4-211ENST00000467272 SPDYE5A6NIY4 337 aa15.51■□□□□ 0.07
UBR4-211ENST00000467272 GRM8O00222 908 aa15.51■□□□□ 0.07
UBR4-211ENST00000467272 GTF2A2P52657 109 aa15.51■□□□□ 0.07
UBR4-211ENST00000467272 MAP3K9P80192 1104 aa15.51■□□□□ 0.07
UBR4-211ENST00000467272 FBXO33Q7Z6M2 555 aa15.51■□□□□ 0.07
UBR4-211ENST00000467272 ZCCHC17Q9NP64 241 aaKnown RBP15.51■□□□□ 0.07
UBR4-211ENST00000467272 TTF2Q9UNY4 1162 aaKnown RBP15.51■□□□□ 0.07
UBR4-211ENST00000467272 RIPOR2Q9Y4F9 1068 aa15.51■□□□□ 0.07
UBR4-211ENST00000467272 ARAP2Q8WZ64 1704 aa15.51■□□□□ 0.07
UBR4-211ENST00000467272 CACNA1FO60840 1977 aa15.5■□□□□ 0.07
UBR4-211ENST00000467272 CCL15-CCL14A0A0B4J2E2 113 aa15.5■□□□□ 0.07
UBR4-211ENST00000467272 HIBADHP31937 336 aaKnown RBP15.5■□□□□ 0.07
UBR4-211ENST00000467272 CRKP46108 304 aa15.5■□□□□ 0.07
UBR4-211ENST00000467272 GYG1P46976 350 aa15.5■□□□□ 0.07
UBR4-211ENST00000467272 HDLBPQ00341 1268 aaKnown RBP15.5■□□□□ 0.07
UBR4-211ENST00000467272 CCL15Q16663 113 aa15.5■□□□□ 0.07
UBR4-211ENST00000467272 WDR63Q8IWG1 891 aa15.5■□□□□ 0.07
UBR4-211ENST00000467272 MRIQ9BWK5 157 aa15.5■□□□□ 0.07
UBR4-211ENST00000467272 PUS3Q9BZE2 481 aaKnown RBP15.5■□□□□ 0.07
UBR4-211ENST00000467272 SNCAIPQ9Y6H5 919 aa15.5■□□□□ 0.07
UBR4-211ENST00000467272 LAMA3Q16787 3333 aa15.5■□□□□ 0.07
UBR4-211ENST00000467272 UTYO14607 1347 aa15.49■□□□□ 0.07
UBR4-211ENST00000467272 TLR2O60603 784 aa15.49■□□□□ 0.07
UBR4-211ENST00000467272 RBM5P52756 815 aaKnown RBP eCLIP15.49■□□□□ 0.071e-7■■■□□ 15.1
UBR4-211ENST00000467272 EXOSC9Q06265 439 aaKnown RBP15.49■□□□□ 0.07
UBR4-211ENST00000467272 CCDC57Q2TAC2 916 aa15.49■□□□□ 0.07
UBR4-211ENST00000467272 OTUD5Q96G74 571 aa15.49■□□□□ 0.07
UBR4-211ENST00000467272 ZFYVE28Q9HCC9 887 aa15.49■□□□□ 0.07
UBR4-211ENST00000467272 SPINK5Q9NQ38 1064 aaPredicted RBP15.49■□□□□ 0.07
UBR4-211ENST00000467272 COLQQ9Y215 455 aaPredicted RBP15.49■□□□□ 0.07
UBR4-211ENST00000467272 A0A0C4DFX4 3053 aa15.49■□□□□ 0.07
UBR4-211ENST00000467272 ALDH1L1O75891 902 aa15.48■□□□□ 0.07
UBR4-211ENST00000467272 TAF1CQ15572 869 aaPredicted RBP15.48■□□□□ 0.07
UBR4-211ENST00000467272 FKBP1CQ5VVH2 108 aa15.48■□□□□ 0.07
UBR4-211ENST00000467272 VGLL2Q8N8G2 317 aa15.48■□□□□ 0.07
UBR4-211ENST00000467272 ARHGAP39Q9C0H5 1083 aa15.48■□□□□ 0.07
UBR4-211ENST00000467272 CNNM1Q9NRU3 951 aa15.48■□□□□ 0.07
UBR4-211ENST00000467272 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.48■□□□□ 0.07
UBR4-211ENST00000467272 TCP10L2B9ZVM9 353 aa15.47■□□□□ 0.07
UBR4-211ENST00000467272 CTGFP29279 349 aa15.47■□□□□ 0.07
UBR4-211ENST00000467272 LACTBP83111 547 aaPredicted RBP15.47■□□□□ 0.07
UBR4-211ENST00000467272 RABL6Q3YEC7 729 aaPredicted RBP15.47■□□□□ 0.07
UBR4-211ENST00000467272 SLC9C1Q4G0N8 1177 aa15.47■□□□□ 0.07
UBR4-211ENST00000467272 APOBEC3HQ6NTF7 200 aaKnown RBP15.47■□□□□ 0.07
UBR4-211ENST00000467272 UBE2Q1Q7Z7E8 422 aa15.47■□□□□ 0.07
UBR4-211ENST00000467272 FAM83AQ86UY5 434 aa15.47■□□□□ 0.07
UBR4-211ENST00000467272 ZDHHC15Q96MV8 337 aa15.47■□□□□ 0.07
UBR4-211ENST00000467272 TMEM106CQ9BVX2 250 aa15.47■□□□□ 0.07
UBR4-211ENST00000467272 CHMP3Q9Y3E7 222 aa15.47■□□□□ 0.07
UBR4-211ENST00000467272 ADGRA2Q96PE1 1338 aa15.46■□□□□ 0.07
UBR4-211ENST00000467272 BTBD19C9JJ37 291 aa15.46■□□□□ 0.07
UBR4-211ENST00000467272 IRF6O14896 467 aa15.46■□□□□ 0.07
UBR4-211ENST00000467272 PLIN1O60240 522 aa15.46■□□□□ 0.07
UBR4-211ENST00000467272 GNRH1P01148 92 aa15.46■□□□□ 0.07
UBR4-211ENST00000467272 ARHGEF6Q15052 776 aa15.46■□□□□ 0.07
UBR4-211ENST00000467272 C17orf99Q6UX52 265 aa15.46■□□□□ 0.07
UBR4-211ENST00000467272 NBPF11Q86T75 865 aa15.46■□□□□ 0.07
UBR4-211ENST00000467272 ERO1BQ86YB8 467 aa15.46■□□□□ 0.07
UBR4-211ENST00000467272 SHISA4Q96DD7 197 aa15.46■□□□□ 0.07
UBR4-211ENST00000467272 SUCLG2Q96I99 432 aa15.46■□□□□ 0.07
UBR4-211ENST00000467272 RPAP1Q9BWH6 1393 aaPredicted RBP15.46■□□□□ 0.07
UBR4-211ENST00000467272 MROH5Q6ZUA9 1318 aa15.45■□□□□ 0.06
UBR4-211ENST00000467272 NBPF7P0C2Y1 421 aaPredicted RBP15.45■□□□□ 0.06
UBR4-211ENST00000467272 CETPP11597 493 aa15.45■□□□□ 0.06
UBR4-211ENST00000467272 TNNI2P48788 182 aa15.45■□□□□ 0.06
UBR4-211ENST00000467272 PPIL2Q13356 520 aa15.45■□□□□ 0.06
UBR4-211ENST00000467272 MOGSQ13724 837 aa15.45■□□□□ 0.06
UBR4-211ENST00000467272 CSADQ9Y600 493 aa15.45■□□□□ 0.06
UBR4-211ENST00000467272 KIF16BQ96L93 1317 aa15.44■□□□□ 0.06
UBR4-211ENST00000467272 H0YGN5 161 aa15.44■□□□□ 0.06
UBR4-211ENST00000467272 CACNB3P54284 484 aa15.44■□□□□ 0.06
UBR4-211ENST00000467272 PRMT2P55345 433 aa15.44■□□□□ 0.06
UBR4-211ENST00000467272 ANKRD44Q8N8A2 993 aa15.44■□□□□ 0.06
UBR4-211ENST00000467272 SH3TC2Q8TF17 1288 aa15.44■□□□□ 0.06
UBR4-211ENST00000467272 TBC1D22AQ8WUA7 517 aa15.44■□□□□ 0.06
UBR4-211ENST00000467272 ZKSCAN4Q969J2 545 aaPredicted RBP15.44■□□□□ 0.06
UBR4-211ENST00000467272 PRO3102Q9H379 93 aa15.44■□□□□ 0.06
UBR4-211ENST00000467272 ZNF112Q9UJU3 913 aa15.44■□□□□ 0.06
UBR4-211ENST00000467272 ZSWIM8A7E2V4 1837 aa15.44■□□□□ 0.06
UBR4-211ENST00000467272 FGFR2P21802 821 aa15.43■□□□□ 0.06
UBR4-211ENST00000467272 SNAPC2Q13487 334 aa15.43■□□□□ 0.06
UBR4-211ENST00000467272 TAF7LQ5H9L4 462 aa15.43■□□□□ 0.06
UBR4-211ENST00000467272 KCNH4Q9UQ05 1017 aa15.43■□□□□ 0.06
UBR4-211ENST00000467272 SUGT1Q9Y2Z0 365 aa15.43■□□□□ 0.06
UBR4-211ENST00000467272 COL6A3P12111 3177 aa15.42■□□□□ 0.06
UBR4-211ENST00000467272 PDE8BO95263 885 aa15.42■□□□□ 0.06
UBR4-211ENST00000467272 PPATQ06203 517 aa15.42■□□□□ 0.06
UBR4-211ENST00000467272 LRRC24Q50LG9 513 aa15.42■□□□□ 0.06
UBR4-211ENST00000467272 HHIPL2Q6UWX4 724 aa15.42■□□□□ 0.06
UBR4-211ENST00000467272 TEKT1Q969V4 418 aa15.42■□□□□ 0.06
UBR4-211ENST00000467272 TRIM47Q96LD4 638 aa15.42■□□□□ 0.06
UBR4-211ENST00000467272 WRNIP1Q96S55 665 aa15.42■□□□□ 0.06
UBR4-211ENST00000467272 SRCIN1Q9C0H9 1055 aa15.42■□□□□ 0.06
UBR4-211ENST00000467272 C9orf78Q9NZ63 289 aaPredicted RBP15.42■□□□□ 0.06
UBR4-211ENST00000467272 ANKRD23Q86SG2 305 aa15.41■□□□□ 0.06
UBR4-211ENST00000467272 BICC1Q9H694 974 aaKnown RBP15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 121.2 ms