RNA–Protein interactions for RNA: ENST00000465721.1

CNOT4-208, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 4

Gene CNOT4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-208ENST00000465721 ZNF333Q96JL9 665 aa14.98□□□□□ -0.01
CNOT4-208ENST00000465721 MS4A4AQ96JQ5 239 aa14.98□□□□□ -0.01
CNOT4-208ENST00000465721 ELP3Q9H9T3 547 aa14.98□□□□□ -0.01
CNOT4-208ENST00000465721 ZNF70Q9UC06 446 aaPredicted RBP14.98□□□□□ -0.01
CNOT4-208ENST00000465721 SERPINA10Q9UK55 444 aa14.98□□□□□ -0.01
CNOT4-208ENST00000465721 MGAMO43451 1857 aa14.97□□□□□ -0.01
CNOT4-208ENST00000465721 F6X3S4 739 aa14.97□□□□□ -0.01
CNOT4-208ENST00000465721 EN2P19622 333 aaPredicted RBP14.97□□□□□ -0.01
CNOT4-208ENST00000465721 RBM5P52756 815 aaKnown RBP eCLIP14.97□□□□□ -0.01
CNOT4-208ENST00000465721 C1QBPQ07021 282 aaKnown RBP14.97□□□□□ -0.01
CNOT4-208ENST00000465721 TNFAIP1Q13829 316 aa14.97□□□□□ -0.01
CNOT4-208ENST00000465721 MFSD14BQ5SR56 506 aa14.97□□□□□ -0.01
CNOT4-208ENST00000465721 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.97□□□□□ -0.01
CNOT4-208ENST00000465721 TDRD7Q8NHU6 1098 aaKnown RBP14.97□□□□□ -0.01
CNOT4-208ENST00000465721 BRI3BPQ8WY22 251 aa14.97□□□□□ -0.01
CNOT4-208ENST00000465721 VAMP4O75379 141 aa14.96□□□□□ -0.01
CNOT4-208ENST00000465721 VGLL4Q14135 290 aa14.96□□□□□ -0.01
CNOT4-208ENST00000465721 TDRD3Q9H7E2 651 aaKnown RBP14.96□□□□□ -0.01
CNOT4-208ENST00000465721 TTF2Q9UNY4 1162 aaKnown RBP14.96□□□□□ -0.01
CNOT4-208ENST00000465721 GRM8O00222 908 aa14.95□□□□□ -0.02
CNOT4-208ENST00000465721 PLIN1O60240 522 aa14.95□□□□□ -0.02
CNOT4-208ENST00000465721 CCDC57Q2TAC2 916 aa14.95□□□□□ -0.02
CNOT4-208ENST00000465721 LDHAL6AQ6ZMR3 332 aa14.95□□□□□ -0.02
CNOT4-208ENST00000465721 DZIP1LQ8IYY4 767 aaKnown RBP14.95□□□□□ -0.02
CNOT4-208ENST00000465721 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.95□□□□□ -0.02
CNOT4-208ENST00000465721 TMEM39BQ9GZU3 492 aa14.95□□□□□ -0.02
CNOT4-208ENST00000465721 CNNM1Q9NRU3 951 aa14.95□□□□□ -0.02
CNOT4-208ENST00000465721 PTCH2Q9Y6C5 1203 aa14.95□□□□□ -0.02
CNOT4-208ENST00000465721 PTPRFP10586 1907 aa14.94□□□□□ -0.02
CNOT4-208ENST00000465721 CCL15-CCL14A0A0B4J2E2 113 aa14.94□□□□□ -0.02
CNOT4-208ENST00000465721 GYG1P46976 350 aa14.94□□□□□ -0.02
CNOT4-208ENST00000465721 FXR1P51114 621 aaKnown RBP eCLIP14.94□□□□□ -0.02
CNOT4-208ENST00000465721 UBE4AQ14139 1066 aa14.94□□□□□ -0.02
CNOT4-208ENST00000465721 TAF1CQ15572 869 aaPredicted RBP14.94□□□□□ -0.02
CNOT4-208ENST00000465721 GRIK5Q16478 980 aa14.94□□□□□ -0.02
CNOT4-208ENST00000465721 CCL15Q16663 113 aa14.94□□□□□ -0.02
CNOT4-208ENST00000465721 TAF7LQ5H9L4 462 aa14.94□□□□□ -0.02
CNOT4-208ENST00000465721 FAM43AQ8N2R8 423 aa14.94□□□□□ -0.02
CNOT4-208ENST00000465721 FAM84BQ96KN1 310 aaPredicted RBP14.94□□□□□ -0.02
CNOT4-208ENST00000465721 DOCK2Q92608 1830 aa14.94□□□□□ -0.02
CNOT4-208ENST00000465721 TCP10L2B9ZVM9 353 aa14.93□□□□□ -0.02
CNOT4-208ENST00000465721 HIBADHP31937 336 aaKnown RBP14.93□□□□□ -0.02
CNOT4-208ENST00000465721 CRKP46108 304 aa14.93□□□□□ -0.02
CNOT4-208ENST00000465721 OTUD5Q96G74 571 aa14.93□□□□□ -0.02
CNOT4-208ENST00000465721 SPDYE5A6NIY4 337 aa14.92□□□□□ -0.02
CNOT4-208ENST00000465721 GTF2A2P52657 109 aa14.92□□□□□ -0.02
CNOT4-208ENST00000465721 MAP3K9P80192 1104 aa14.92□□□□□ -0.02
CNOT4-208ENST00000465721 EXOSC9Q06265 439 aaKnown RBP14.92□□□□□ -0.02
CNOT4-208ENST00000465721 SLC9C1Q4G0N8 1177 aa14.92□□□□□ -0.02
CNOT4-208ENST00000465721 PUS3Q9BZE2 481 aaKnown RBP14.92□□□□□ -0.02
CNOT4-208ENST00000465721 ZFYVE28Q9HCC9 887 aa14.92□□□□□ -0.02
CNOT4-208ENST00000465721 SNCAIPQ9Y6H5 919 aa14.92□□□□□ -0.02
CNOT4-208ENST00000465721 KAZALD1Q96I82 304 aa14.91□□□□□ -0.02
CNOT4-208ENST00000465721 TMEM106CQ9BVX2 250 aa14.91□□□□□ -0.02
CNOT4-208ENST00000465721 CSADQ9Y600 493 aa14.91□□□□□ -0.02
CNOT4-208ENST00000465721 RPAP1Q9BWH6 1393 aaPredicted RBP14.9□□□□□ -0.02
CNOT4-208ENST00000465721 LAMA3Q16787 3333 aa14.9□□□□□ -0.02
CNOT4-208ENST00000465721 ALDH1L1O75891 902 aa14.9□□□□□ -0.02
CNOT4-208ENST00000465721 TNNI2P48788 182 aa14.9□□□□□ -0.02
CNOT4-208ENST00000465721 CACNB3P54284 484 aa14.9□□□□□ -0.02
CNOT4-208ENST00000465721 SUCLG2Q96I99 432 aa14.9□□□□□ -0.02
CNOT4-208ENST00000465721 ARHGAP39Q9C0H5 1083 aa14.9□□□□□ -0.02
CNOT4-208ENST00000465721 DOCK3Q8IZD9 2030 aa14.9□□□□□ -0.02
CNOT4-208ENST00000465721 TLR2O60603 784 aa14.89□□□□□ -0.03
CNOT4-208ENST00000465721 HDLBPQ00341 1268 aaKnown RBP14.89□□□□□ -0.03
CNOT4-208ENST00000465721 ARHGEF6Q15052 776 aa14.89□□□□□ -0.03
CNOT4-208ENST00000465721 FBXO33Q7Z6M2 555 aa14.89□□□□□ -0.03
CNOT4-208ENST00000465721 NBPF11Q86T75 865 aa14.89□□□□□ -0.03
CNOT4-208ENST00000465721 WDR63Q8IWG1 891 aa14.89□□□□□ -0.03
CNOT4-208ENST00000465721 ZCCHC17Q9NP64 241 aaKnown RBP14.89□□□□□ -0.03
CNOT4-208ENST00000465721 SPINK5Q9NQ38 1064 aaPredicted RBP14.89□□□□□ -0.03
CNOT4-208ENST00000465721 C9orf78Q9NZ63 289 aaPredicted RBP14.89□□□□□ -0.03
CNOT4-208ENST00000465721 IQSEC3Q9UPP2 1182 aaPredicted RBP14.89□□□□□ -0.03
CNOT4-208ENST00000465721 COLQQ9Y215 455 aaPredicted RBP14.89□□□□□ -0.03
CNOT4-208ENST00000465721 RIPOR2Q9Y4F9 1068 aa14.89□□□□□ -0.03
CNOT4-208ENST00000465721 MYH2Q9UKX2 1941 aa14.89□□□□□ -0.03
CNOT4-208ENST00000465721 PHIPQ8WWQ0 1821 aa14.89□□□□□ -0.03
CNOT4-208ENST00000465721 BTBD19C9JJ37 291 aa14.88□□□□□ -0.03
CNOT4-208ENST00000465721 LACTBP83111 547 aaPredicted RBP14.88□□□□□ -0.03
CNOT4-208ENST00000465721 VGLL2Q8N8G2 317 aa14.88□□□□□ -0.03
CNOT4-208ENST00000465721 SH3TC2Q8TF17 1288 aa14.88□□□□□ -0.03
CNOT4-208ENST00000465721 WRNIP1Q96S55 665 aa14.88□□□□□ -0.03
CNOT4-208ENST00000465721 UTYO14607 1347 aa14.88□□□□□ -0.03
CNOT4-208ENST00000465721 MROH5Q6ZUA9 1318 aa14.88□□□□□ -0.03
CNOT4-208ENST00000465721 ALPK3Q96L96 1907 aa14.88□□□□□ -0.03
CNOT4-208ENST00000465721 DOCK1Q14185 1865 aa14.87□□□□□ -0.03
CNOT4-208ENST00000465721 COL6A3P12111 3177 aa14.87□□□□□ -0.03
CNOT4-208ENST00000465721 IRF6O14896 467 aa14.87□□□□□ -0.03
CNOT4-208ENST00000465721 CETPP11597 493 aa14.87□□□□□ -0.03
CNOT4-208ENST00000465721 CHAF1AQ13111 956 aaPredicted RBP14.87□□□□□ -0.03
CNOT4-208ENST00000465721 PPIL2Q13356 520 aa14.87□□□□□ -0.03
CNOT4-208ENST00000465721 SLC4A8Q2Y0W8 1093 aa14.87□□□□□ -0.03
CNOT4-208ENST00000465721 RABL6Q3YEC7 729 aaPredicted RBP14.87□□□□□ -0.03
CNOT4-208ENST00000465721 FAM83AQ86UY5 434 aa14.87□□□□□ -0.03
CNOT4-208ENST00000465721 ERO1BQ86YB8 467 aa14.87□□□□□ -0.03
CNOT4-208ENST00000465721 TBC1D22AQ8WUA7 517 aa14.87□□□□□ -0.03
CNOT4-208ENST00000465721 ZKSCAN4Q969J2 545 aaPredicted RBP14.87□□□□□ -0.03
CNOT4-208ENST00000465721 TEKT1Q969V4 418 aa14.87□□□□□ -0.03
CNOT4-208ENST00000465721 SHISA4Q96DD7 197 aa14.87□□□□□ -0.03
CNOT4-208ENST00000465721 ZDHHC15Q96MV8 337 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms