RNA–Protein interactions for RNA: ENST00000465399.5

ATG4B-214, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-214ENST00000465399 TBC1D22AQ8WUA7 517 aa17.86■□□□□ 0.45
ATG4B-214ENST00000465399 ELP3Q9H9T3 547 aa17.86■□□□□ 0.45
ATG4B-214ENST00000465399 TRIM17Q9Y577 477 aa17.86■□□□□ 0.45
ATG4B-214ENST00000465399 PTPRCP08575 1304 aa17.86■□□□□ 0.45
ATG4B-214ENST00000465399 TCP10L2B9ZVM9 353 aa17.85■□□□□ 0.45
ATG4B-214ENST00000465399 CHAF1AQ13111 956 aaPredicted RBP17.85■□□□□ 0.45
ATG4B-214ENST00000465399 RBBP6Q7Z6E9 1792 aaKnown RBP17.85■□□□□ 0.45
ATG4B-214ENST00000465399 MRPL50Q8N5N7 158 aaKnown RBP17.85■□□□□ 0.45
ATG4B-214ENST00000465399 OPTNQ96CV9 577 aa17.85■□□□□ 0.45
ATG4B-214ENST00000465399 IQSEC3Q9UPP2 1182 aaPredicted RBP17.85■□□□□ 0.45
ATG4B-214ENST00000465399 PDE8BO95263 885 aa17.84■□□□□ 0.45
ATG4B-214ENST00000465399 GJA5P36382 358 aa17.84■□□□□ 0.45
ATG4B-214ENST00000465399 CRHR2Q13324 411 aa17.84■□□□□ 0.45
ATG4B-214ENST00000465399 LRRC24Q50LG9 513 aa17.84■□□□□ 0.45
ATG4B-214ENST00000465399 FBXO33Q7Z6M2 555 aa17.84■□□□□ 0.45
ATG4B-214ENST00000465399 ANKRD44Q8N8A2 993 aa17.84■□□□□ 0.45
ATG4B-214ENST00000465399 ERO1AQ96HE7 468 aa17.84■□□□□ 0.45
ATG4B-214ENST00000465399 TEPSINQ96N21 525 aa17.84■□□□□ 0.45
ATG4B-214ENST00000465399 TESPA1A2RU30 521 aaPredicted RBP17.83■□□□□ 0.44
ATG4B-214ENST00000465399 HDLBPQ00341 1268 aaKnown RBP17.83■□□□□ 0.44
ATG4B-214ENST00000465399 PRPF38BQ5VTL8 546 aaKnown RBP17.83■□□□□ 0.44
ATG4B-214ENST00000465399 OTOP1Q7RTM1 612 aa17.83■□□□□ 0.44
ATG4B-214ENST00000465399 CDAN1Q8IWY9 1227 aa17.83■□□□□ 0.44
ATG4B-214ENST00000465399 TEKT1Q969V4 418 aa17.83■□□□□ 0.44
ATG4B-214ENST00000465399 TMEM39BQ9GZU3 492 aa17.83■□□□□ 0.44
ATG4B-214ENST00000465399 AK9Q5TCS8 1911 aa17.82■□□□□ 0.44
ATG4B-214ENST00000465399 MAST3O60307 1309 aa17.82■□□□□ 0.44
ATG4B-214ENST00000465399 E9PSI1 815 aa17.82■□□□□ 0.44
ATG4B-214ENST00000465399 VGLL2Q8N8G2 317 aa17.82■□□□□ 0.44
ATG4B-214ENST00000465399 TMOD2Q9NZR1 351 aa17.82■□□□□ 0.44
ATG4B-214ENST00000465399 CSADQ9Y600 493 aa17.82■□□□□ 0.44
ATG4B-214ENST00000465399 KIF16BQ96L93 1317 aa17.81■□□□□ 0.44
ATG4B-214ENST00000465399 PUM3Q15397 648 aaKnown RBP17.81■□□□□ 0.44
ATG4B-214ENST00000465399 GRIK5Q16478 980 aa17.81■□□□□ 0.44
ATG4B-214ENST00000465399 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.81■□□□□ 0.44
ATG4B-214ENST00000465399 KLHDC4Q8TBB5 520 aa17.81■□□□□ 0.44
ATG4B-214ENST00000465399 CD99L2Q8TCZ2 262 aa17.81■□□□□ 0.44
ATG4B-214ENST00000465399 SSH1Q8WYL5 1049 aa17.81■□□□□ 0.44
ATG4B-214ENST00000465399 IFIT1P09914 478 aaKnown RBP17.8■□□□□ 0.44
ATG4B-214ENST00000465399 BCAMP50895 628 aa17.8■□□□□ 0.44
ATG4B-214ENST00000465399 VGLL4Q14135 290 aa17.8■□□□□ 0.44
ATG4B-214ENST00000465399 INTS3Q68E01 1043 aaKnown RBP17.8■□□□□ 0.44
ATG4B-214ENST00000465399 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.8■□□□□ 0.44
ATG4B-214ENST00000465399 HOOK2Q96ED9 719 aa17.8■□□□□ 0.44
ATG4B-214ENST00000465399 PTPN18Q99952 460 aa17.8■□□□□ 0.44
ATG4B-214ENST00000465399 USP44Q9H0E7 712 aa17.8■□□□□ 0.44
ATG4B-214ENST00000465399 SUGT1Q9Y2Z0 365 aa17.8■□□□□ 0.44
ATG4B-214ENST00000465399 GTF2A2P52657 109 aa17.79■□□□□ 0.44
ATG4B-214ENST00000465399 MAP3K9P80192 1104 aa17.79■□□□□ 0.44
ATG4B-214ENST00000465399 SP3Q02447 781 aa17.79■□□□□ 0.44
ATG4B-214ENST00000465399 MS4A4AQ96JQ5 239 aa17.79■□□□□ 0.44
ATG4B-214ENST00000465399 ZDHHC15Q96MV8 337 aa17.79■□□□□ 0.44
ATG4B-214ENST00000465399 EFCC1Q9HA90 598 aa17.79■□□□□ 0.44
ATG4B-214ENST00000465399 PTPN22Q9Y2R2 807 aa17.79■□□□□ 0.44
ATG4B-214ENST00000465399 HTTP42858 3142 aa17.78■□□□□ 0.44
ATG4B-214ENST00000465399 CCL15-CCL14A0A0B4J2E2 113 aa17.78■□□□□ 0.44
ATG4B-214ENST00000465399 SLC5A1P13866 664 aa17.78■□□□□ 0.44
ATG4B-214ENST00000465399 CACNB3P54284 484 aa17.78■□□□□ 0.44
ATG4B-214ENST00000465399 CCL15Q16663 113 aa17.78■□□□□ 0.44
ATG4B-214ENST00000465399 CNKSR2Q8WXI2 1034 aa17.78■□□□□ 0.44
ATG4B-214ENST00000465399 OTUD5Q96G74 571 aa17.78■□□□□ 0.44
ATG4B-214ENST00000465399 MRIQ9BWK5 157 aa17.78■□□□□ 0.44
ATG4B-214ENST00000465399 WDHD1O75717 1129 aaPredicted RBP17.77■□□□□ 0.44
ATG4B-214ENST00000465399 FGFR2P21802 821 aa17.77■□□□□ 0.44
ATG4B-214ENST00000465399 TAF1CQ15572 869 aaPredicted RBP17.77■□□□□ 0.44
ATG4B-214ENST00000465399 FKBP1CQ5VVH2 108 aa17.77■□□□□ 0.44
ATG4B-214ENST00000465399 FAM83AQ86UY5 434 aa17.77■□□□□ 0.44
ATG4B-214ENST00000465399 BRI3BPQ8WY22 251 aa17.77■□□□□ 0.44
ATG4B-214ENST00000465399 ZFYVE28Q9HCC9 887 aa17.77■□□□□ 0.44
ATG4B-214ENST00000465399 CENPFP49454 3210 aa17.77■□□□□ 0.43
ATG4B-214ENST00000465399 RPAP1Q9BWH6 1393 aaPredicted RBP17.77■□□□□ 0.43
ATG4B-214ENST00000465399 SPDYE5A6NIY4 337 aa17.76■□□□□ 0.43
ATG4B-214ENST00000465399 EYA2O00167 538 aa17.76■□□□□ 0.43
ATG4B-214ENST00000465399 SLFN5Q08AF3 891 aa17.76■□□□□ 0.43
ATG4B-214ENST00000465399 ARHGEF6Q15052 776 aa17.76■□□□□ 0.43
ATG4B-214ENST00000465399 ALDH1L2Q3SY69 923 aa17.76■□□□□ 0.43
ATG4B-214ENST00000465399 HHIPL2Q6UWX4 724 aa17.76■□□□□ 0.43
ATG4B-214ENST00000465399 LPIN2Q92539 896 aa17.76■□□□□ 0.43
ATG4B-214ENST00000465399 WRNIP1Q96S55 665 aa17.76■□□□□ 0.43
ATG4B-214ENST00000465399 KIAA0100Q14667 2235 aaKnown RBP17.76■□□□□ 0.43
ATG4B-214ENST00000465399 DCAF15Q66K64 600 aa17.75■□□□□ 0.43
ATG4B-214ENST00000465399 APOBEC3HQ6NTF7 200 aaKnown RBP17.75■□□□□ 0.43
ATG4B-214ENST00000465399 ERO1BQ86YB8 467 aa17.75■□□□□ 0.43
ATG4B-214ENST00000465399 WDR66Q8TBY9 1149 aa17.75■□□□□ 0.43
ATG4B-214ENST00000465399 SMC4Q9NTJ3 1288 aa17.75■□□□□ 0.43
ATG4B-214ENST00000465399 RFX5P48382 616 aaPredicted RBP17.74■□□□□ 0.43
ATG4B-214ENST00000465399 FAM43AQ8N2R8 423 aa17.74■□□□□ 0.43
ATG4B-214ENST00000465399 SNCAIPQ9Y6H5 919 aa17.74■□□□□ 0.43
ATG4B-214ENST00000465399 DOCK2Q92608 1830 aa17.74■□□□□ 0.43
ATG4B-214ENST00000465399 MYH2Q9UKX2 1941 aa17.74■□□□□ 0.43
ATG4B-214ENST00000465399 ZSWIM8A7E2V4 1837 aa17.73■□□□□ 0.43
ATG4B-214ENST00000465399 POTEFA5A3E0 1075 aa17.73■□□□□ 0.43
ATG4B-214ENST00000465399 UBTFL1P0CB47 393 aaPredicted RBP17.73■□□□□ 0.43
ATG4B-214ENST00000465399 CETPP11597 493 aa17.73■□□□□ 0.43
ATG4B-214ENST00000465399 ZKSCAN4Q969J2 545 aaPredicted RBP17.73■□□□□ 0.43
ATG4B-214ENST00000465399 ARMC5Q96C12 935 aa17.73■□□□□ 0.43
ATG4B-214ENST00000465399 FBXO3Q9UK99 471 aa17.73■□□□□ 0.43
ATG4B-214ENST00000465399 SNAPC2Q13487 334 aa17.72■□□□□ 0.43
ATG4B-214ENST00000465399 ZNF341Q9BYN7 854 aa17.72■□□□□ 0.43
ATG4B-214ENST00000465399 SIL1Q9H173 461 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms