RNA–Protein interactions for RNA: ENST00000464800.5

MCF2L-220, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-220ENST00000464800 EXOSC9Q06265 439 aaKnown RBP18.5■□□□□ 0.55
MCF2L-220ENST00000464800 VGLL4Q14135 290 aa18.5■□□□□ 0.55
MCF2L-220ENST00000464800 ARHGEF6Q15052 776 aa18.5■□□□□ 0.55
MCF2L-220ENST00000464800 TAF1CQ15572 869 aaPredicted RBP18.5■□□□□ 0.55
MCF2L-220ENST00000464800 CCL15Q16663 113 aa18.5■□□□□ 0.55
MCF2L-220ENST00000464800 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.5■□□□□ 0.55
MCF2L-220ENST00000464800 CDAN1Q8IWY9 1227 aa18.5■□□□□ 0.55
MCF2L-220ENST00000464800 TMEM106CQ9BVX2 250 aa18.5■□□□□ 0.55
MCF2L-220ENST00000464800 ZFYVE28Q9HCC9 887 aa18.5■□□□□ 0.55
MCF2L-220ENST00000464800 C9orf78Q9NZ63 289 aaPredicted RBP18.5■□□□□ 0.55
MCF2L-220ENST00000464800 CENPFP49454 3210 aa18.49■□□□□ 0.55
MCF2L-220ENST00000464800 CRKP46108 304 aa18.49■□□□□ 0.55
MCF2L-220ENST00000464800 SLC9C1Q4G0N8 1177 aa18.49■□□□□ 0.55
MCF2L-220ENST00000464800 CNKSR2Q8WXI2 1034 aa18.49■□□□□ 0.55
MCF2L-220ENST00000464800 BRI3BPQ8WY22 251 aa18.49■□□□□ 0.55
MCF2L-220ENST00000464800 ZNF333Q96JL9 665 aa18.49■□□□□ 0.55
MCF2L-220ENST00000464800 TMEM39BQ9GZU3 492 aa18.49■□□□□ 0.55
MCF2L-220ENST00000464800 CSADQ9Y600 493 aa18.49■□□□□ 0.55
MCF2L-220ENST00000464800 ZSWIM8A7E2V4 1837 aa18.49■□□□□ 0.55
MCF2L-220ENST00000464800 MAP3K9P80192 1104 aa18.48■□□□□ 0.55
MCF2L-220ENST00000464800 NBPF11Q86T75 865 aa18.48■□□□□ 0.55
MCF2L-220ENST00000464800 WDR63Q8IWG1 891 aa18.48■□□□□ 0.55
MCF2L-220ENST00000464800 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.48■□□□□ 0.55
MCF2L-220ENST00000464800 OTUD5Q96G74 571 aa18.48■□□□□ 0.55
MCF2L-220ENST00000464800 MKI67P46013 3256 aaKnown RBP18.48■□□□□ 0.55
MCF2L-220ENST00000464800 FAM84BQ96KN1 310 aaPredicted RBP18.47■□□□□ 0.55
MCF2L-220ENST00000464800 PTCH2Q9Y6C5 1203 aa18.47■□□□□ 0.55
MCF2L-220ENST00000464800 MYH13Q9UKX3 1938 aa18.47■□□□□ 0.55
MCF2L-220ENST00000464800 WDHD1O75717 1129 aaPredicted RBP18.46■□□□□ 0.55
MCF2L-220ENST00000464800 ALDH1L1O75891 902 aa18.46■□□□□ 0.55
MCF2L-220ENST00000464800 VPS37DQ86XT2 251 aa18.46■□□□□ 0.55
MCF2L-220ENST00000464800 FAM43AQ8N2R8 423 aa18.46■□□□□ 0.55
MCF2L-220ENST00000464800 MROH5Q6ZUA9 1318 aa18.46■□□□□ 0.55
MCF2L-220ENST00000464800 SLC4A8Q2Y0W8 1093 aa18.45■□□□□ 0.54
MCF2L-220ENST00000464800 SLC4A10Q6U841 1118 aa18.45■□□□□ 0.54
MCF2L-220ENST00000464800 PUS3Q9BZE2 481 aaKnown RBP18.45■□□□□ 0.54
MCF2L-220ENST00000464800 SRCIN1Q9C0H9 1055 aa18.45■□□□□ 0.54
MCF2L-220ENST00000464800 SALL2Q9Y467 1007 aaPredicted RBP18.45■□□□□ 0.54
MCF2L-220ENST00000464800 SPDYE5A6NIY4 337 aa18.44■□□□□ 0.54
MCF2L-220ENST00000464800 HDLBPQ00341 1268 aaKnown RBP18.44■□□□□ 0.54
MCF2L-220ENST00000464800 CHAF1AQ13111 956 aaPredicted RBP18.44■□□□□ 0.54
MCF2L-220ENST00000464800 TBC1D22AQ8WUA7 517 aa18.44■□□□□ 0.54
MCF2L-220ENST00000464800 TEKT1Q969V4 418 aa18.44■□□□□ 0.54
MCF2L-220ENST00000464800 SUCLG2Q96I99 432 aa18.44■□□□□ 0.54
MCF2L-220ENST00000464800 TMOD2Q9NZR1 351 aa18.44■□□□□ 0.54
MCF2L-220ENST00000464800 IQSEC3Q9UPP2 1182 aaPredicted RBP18.44■□□□□ 0.54
MCF2L-220ENST00000464800 FRAT2O75474 233 aaPredicted RBP18.43■□□□□ 0.54
MCF2L-220ENST00000464800 CETPP11597 493 aa18.43■□□□□ 0.54
MCF2L-220ENST00000464800 KIF22Q14807 665 aa18.43■□□□□ 0.54
MCF2L-220ENST00000464800 GRIK5Q16478 980 aa18.43■□□□□ 0.54
MCF2L-220ENST00000464800 ERO1BQ86YB8 467 aa18.43■□□□□ 0.54
MCF2L-220ENST00000464800 HOOK2Q96ED9 719 aa18.43■□□□□ 0.54
MCF2L-220ENST00000464800 WRNIP1Q96S55 665 aa18.43■□□□□ 0.54
MCF2L-220ENST00000464800 MRS2Q9HD23 443 aa18.43■□□□□ 0.54
MCF2L-220ENST00000464800 ZCCHC17Q9NP64 241 aaKnown RBP18.43■□□□□ 0.54
MCF2L-220ENST00000464800 RIPOR2Q9Y4F9 1068 aa18.43■□□□□ 0.54
MCF2L-220ENST00000464800 SNCAIPQ9Y6H5 919 aa18.43■□□□□ 0.54
MCF2L-220ENST00000464800 BRCA2P51587 3418 aa18.43■□□□□ 0.54
MCF2L-220ENST00000464800 TLR2O60603 784 aa18.42■□□□□ 0.54
MCF2L-220ENST00000464800 CACNB3P54284 484 aa18.42■□□□□ 0.54
MCF2L-220ENST00000464800 CAVIN4Q5BKX8 364 aa18.42■□□□□ 0.54
MCF2L-220ENST00000464800 FBXO33Q7Z6M2 555 aa18.42■□□□□ 0.54
MCF2L-220ENST00000464800 RPAP1Q9BWH6 1393 aaPredicted RBP18.42■□□□□ 0.54
MCF2L-220ENST00000464800 MYCP01106 439 aaPredicted RBP18.41■□□□□ 0.54
MCF2L-220ENST00000464800 FXR1P51114 621 aaKnown RBP eCLIP18.41■□□□□ 0.54
MCF2L-220ENST00000464800 LACTBP83111 547 aaPredicted RBP18.41■□□□□ 0.54
MCF2L-220ENST00000464800 SNAPC2Q13487 334 aa18.41■□□□□ 0.54
MCF2L-220ENST00000464800 METTL24Q5JXM2 366 aa18.41■□□□□ 0.54
MCF2L-220ENST00000464800 KAZALD1Q96I82 304 aa18.41■□□□□ 0.54
MCF2L-220ENST00000464800 MAST3O60307 1309 aa18.41■□□□□ 0.54
MCF2L-220ENST00000464800 BTBD19C9JJ37 291 aa18.4■□□□□ 0.54
MCF2L-220ENST00000464800 GNRH1P01148 92 aa18.4■□□□□ 0.54
MCF2L-220ENST00000464800 NBPF7P0C2Y1 421 aaPredicted RBP18.4■□□□□ 0.54
MCF2L-220ENST00000464800 FAM83AQ86UY5 434 aa18.4■□□□□ 0.54
MCF2L-220ENST00000464800 SH3TC2Q8TF17 1288 aa18.4■□□□□ 0.54
MCF2L-220ENST00000464800 ZDHHC15Q96MV8 337 aa18.4■□□□□ 0.54
MCF2L-220ENST00000464800 ARHGAP39Q9C0H5 1083 aa18.4■□□□□ 0.54
MCF2L-220ENST00000464800 BICC1Q9H694 974 aaKnown RBP18.4■□□□□ 0.54
MCF2L-220ENST00000464800 SPINK5Q9NQ38 1064 aaPredicted RBP18.4■□□□□ 0.54
MCF2L-220ENST00000464800 UTYO14607 1347 aa18.4■□□□□ 0.54
MCF2L-220ENST00000464800 IRF6O14896 467 aa18.39■□□□□ 0.53
MCF2L-220ENST00000464800 PPIL2Q13356 520 aa18.39■□□□□ 0.53
MCF2L-220ENST00000464800 LRRC24Q50LG9 513 aa18.39■□□□□ 0.53
MCF2L-220ENST00000464800 FKBP1CQ5VVH2 108 aa18.39■□□□□ 0.53
MCF2L-220ENST00000464800 DCAF15Q66K64 600 aa18.39■□□□□ 0.53
MCF2L-220ENST00000464800 ZKSCAN4Q969J2 545 aaPredicted RBP18.39■□□□□ 0.53
MCF2L-220ENST00000464800 AK9Q5TCS8 1911 aa18.39■□□□□ 0.53
MCF2L-220ENST00000464800 PRMT2P55345 433 aa18.38■□□□□ 0.53
MCF2L-220ENST00000464800 RABL6Q3YEC7 729 aaPredicted RBP18.38■□□□□ 0.53
MCF2L-220ENST00000464800 VGLL2Q8N8G2 317 aa18.38■□□□□ 0.53
MCF2L-220ENST00000464800 COLQQ9Y215 455 aaPredicted RBP18.38■□□□□ 0.53
MCF2L-220ENST00000464800 SUGT1Q9Y2Z0 365 aa18.38■□□□□ 0.53
MCF2L-220ENST00000464800 PDE8BO95263 885 aa18.37■□□□□ 0.53
MCF2L-220ENST00000464800 APOBEC3HQ6NTF7 200 aaKnown RBP18.37■□□□□ 0.53
MCF2L-220ENST00000464800 MRIQ9BWK5 157 aa18.37■□□□□ 0.53
MCF2L-220ENST00000464800 CEP290O15078 2479 aa18.36■□□□□ 0.53
MCF2L-220ENST00000464800 BCAMP50895 628 aa18.36■□□□□ 0.53
MCF2L-220ENST00000464800 ANKRD44Q8N8A2 993 aa18.36■□□□□ 0.53
MCF2L-220ENST00000464800 KIF16BQ96L93 1317 aa18.36■□□□□ 0.53
MCF2L-220ENST00000464800 ZNF341Q9BYN7 854 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms