RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 SZT2Q5T011 3432 aa19.94■□□□□ 0.78
SND1-203ENST00000463020 CACNB3P54284 484 aa19.93■□□□□ 0.78
SND1-203ENST00000463020 SP3Q02447 781 aa19.93■□□□□ 0.78
SND1-203ENST00000463020 VGLL4Q14135 290 aa19.93■□□□□ 0.78
SND1-203ENST00000463020 FAM43AQ8N2R8 423 aa19.93■□□□□ 0.78
SND1-203ENST00000463020 CNNM1Q9NRU3 951 aa19.93■□□□□ 0.78
SND1-203ENST00000463020 IQSEC3Q9UPP2 1182 aaPredicted RBP19.93■□□□□ 0.78
SND1-203ENST00000463020 UNCXA6NJT0 531 aa19.92■□□□□ 0.78
SND1-203ENST00000463020 GRM8O00222 908 aa19.92■□□□□ 0.78
SND1-203ENST00000463020 DZIP1LQ8IYY4 767 aaKnown RBP19.92■□□□□ 0.78
SND1-203ENST00000463020 SUCLG2Q96I99 432 aa19.92■□□□□ 0.78
SND1-203ENST00000463020 PTCH2Q9Y6C5 1203 aa19.92■□□□□ 0.78
SND1-203ENST00000463020 CCDC57Q2TAC2 916 aa19.91■□□□□ 0.78
SND1-203ENST00000463020 INTS3Q68E01 1043 aaKnown RBP19.91■□□□□ 0.78
SND1-203ENST00000463020 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.91■□□□□ 0.78
SND1-203ENST00000463020 ZNF333Q96JL9 665 aa19.91■□□□□ 0.78
SND1-203ENST00000463020 ARHGAP39Q9C0H5 1083 aa19.91■□□□□ 0.78
SND1-203ENST00000463020 SERPINA10Q9UK55 444 aa19.91■□□□□ 0.78
SND1-203ENST00000463020 RANBP2P49792 3224 aaKnown RBP19.9■□□□□ 0.78
SND1-203ENST00000463020 CRKP46108 304 aa19.9■□□□□ 0.78
SND1-203ENST00000463020 TAF7LQ5H9L4 462 aa19.9■□□□□ 0.78
SND1-203ENST00000463020 CCL15-CCL14A0A0B4J2E2 113 aa19.89■□□□□ 0.77
SND1-203ENST00000463020 CACNA1FO60840 1977 aa19.89■□□□□ 0.77
SND1-203ENST00000463020 MYCP01106 439 aaPredicted RBP19.89■□□□□ 0.77
SND1-203ENST00000463020 HIBADHP31937 336 aaKnown RBP19.89■□□□□ 0.77
SND1-203ENST00000463020 CCL15Q16663 113 aa19.89■□□□□ 0.77
SND1-203ENST00000463020 OTUD5Q96G74 571 aa19.89■□□□□ 0.77
SND1-203ENST00000463020 NBPF7P0C2Y1 421 aaPredicted RBP19.88■□□□□ 0.77
SND1-203ENST00000463020 UBE4AQ14139 1066 aa19.88■□□□□ 0.77
SND1-203ENST00000463020 OTUD7BQ6GQQ9 843 aa19.88■□□□□ 0.77
SND1-203ENST00000463020 RIPOR2Q9Y4F9 1068 aa19.88■□□□□ 0.77
SND1-203ENST00000463020 SNCAIPQ9Y6H5 919 aa19.88■□□□□ 0.77
SND1-203ENST00000463020 MAP3K9P80192 1104 aa19.87■□□□□ 0.77
SND1-203ENST00000463020 TAF1CQ15572 869 aaPredicted RBP19.87■□□□□ 0.77
SND1-203ENST00000463020 LRRC24Q50LG9 513 aa19.87■□□□□ 0.77
SND1-203ENST00000463020 GCC1Q96CN9 775 aa19.87■□□□□ 0.77
SND1-203ENST00000463020 ECM2O94769 699 aaPredicted RBP19.86■□□□□ 0.77
SND1-203ENST00000463020 FXR1P51114 621 aaKnown RBP eCLIP19.86■□□□□ 0.77
SND1-203ENST00000463020 CHAF1AQ13111 956 aaPredicted RBP19.86■□□□□ 0.77
SND1-203ENST00000463020 TNFAIP1Q13829 316 aa19.86■□□□□ 0.77
SND1-203ENST00000463020 SLC4A10Q6U841 1118 aa19.86■□□□□ 0.77
SND1-203ENST00000463020 FBXO33Q7Z6M2 555 aa19.86■□□□□ 0.77
SND1-203ENST00000463020 WDR63Q8IWG1 891 aa19.86■□□□□ 0.77
SND1-203ENST00000463020 CTGFP29279 349 aa19.85■□□□□ 0.77
SND1-203ENST00000463020 NCBP3Q53F19 620 aaKnown RBP19.85■□□□□ 0.77
SND1-203ENST00000463020 ANKRD44Q8N8A2 993 aa19.85■□□□□ 0.77
SND1-203ENST00000463020 KLHDC4Q8TBB5 520 aa19.85■□□□□ 0.77
SND1-203ENST00000463020 SH3TC2Q8TF17 1288 aa19.85■□□□□ 0.77
SND1-203ENST00000463020 ZKSCAN4Q969J2 545 aaPredicted RBP19.85■□□□□ 0.77
SND1-203ENST00000463020 C9orf78Q9NZ63 289 aaPredicted RBP19.85■□□□□ 0.77
SND1-203ENST00000463020 CEP290O15078 2479 aa19.84■□□□□ 0.77
SND1-203ENST00000463020 SPDYE5A6NIY4 337 aa19.84■□□□□ 0.77
SND1-203ENST00000463020 BTBD19C9JJ37 291 aa19.84■□□□□ 0.77
SND1-203ENST00000463020 GTF2A2P52657 109 aa19.84■□□□□ 0.77
SND1-203ENST00000463020 VGLL2Q8N8G2 317 aa19.84■□□□□ 0.77
SND1-203ENST00000463020 BICC1Q9H694 974 aaKnown RBP19.84■□□□□ 0.77
SND1-203ENST00000463020 ZFYVE28Q9HCC9 887 aa19.84■□□□□ 0.77
SND1-203ENST00000463020 ALDH1L1O75891 902 aa19.83■□□□□ 0.77
SND1-203ENST00000463020 SLC9C1Q4G0N8 1177 aa19.83■□□□□ 0.77
SND1-203ENST00000463020 SRCIN1Q9C0H9 1055 aa19.83■□□□□ 0.77
SND1-203ENST00000463020 MRS2Q9HD23 443 aa19.83■□□□□ 0.77
SND1-203ENST00000463020 COLQQ9Y215 455 aaPredicted RBP19.83■□□□□ 0.77
SND1-203ENST00000463020 IRF6O14896 467 aa19.82■□□□□ 0.76
SND1-203ENST00000463020 BCAMP50895 628 aa19.82■□□□□ 0.76
SND1-203ENST00000463020 APOBEC3HQ6NTF7 200 aaKnown RBP19.82■□□□□ 0.76
SND1-203ENST00000463020 WRNIP1Q96S55 665 aa19.82■□□□□ 0.76
SND1-203ENST00000463020 CSADQ9Y600 493 aa19.82■□□□□ 0.76
SND1-203ENST00000463020 UTYO14607 1347 aa19.81■□□□□ 0.76
SND1-203ENST00000463020 RABL6Q3YEC7 729 aaPredicted RBP19.81■□□□□ 0.76
SND1-203ENST00000463020 MROH5Q6ZUA9 1318 aa19.8■□□□□ 0.76
SND1-203ENST00000463020 TLR2O60603 784 aa19.8■□□□□ 0.76
SND1-203ENST00000463020 LACTBP83111 547 aaPredicted RBP19.8■□□□□ 0.76
SND1-203ENST00000463020 SHISA4Q96DD7 197 aa19.8■□□□□ 0.76
SND1-203ENST00000463020 TMEM106CQ9BVX2 250 aa19.8■□□□□ 0.76
SND1-203ENST00000463020 INPP5BP32019 993 aa19.79■□□□□ 0.76
SND1-203ENST00000463020 TNNI2P48788 182 aa19.79■□□□□ 0.76
SND1-203ENST00000463020 METTL24Q5JXM2 366 aa19.79■□□□□ 0.76
SND1-203ENST00000463020 MIGA2Q7L4E1 593 aa19.79■□□□□ 0.76
SND1-203ENST00000463020 TEKT1Q969V4 418 aa19.79■□□□□ 0.76
SND1-203ENST00000463020 ZDHHC15Q96MV8 337 aa19.79■□□□□ 0.76
SND1-203ENST00000463020 TRIOBPQ9H2D6 2365 aa19.79■□□□□ 0.76
SND1-203ENST00000463020 H0YGN5 161 aa19.78■□□□□ 0.76
SND1-203ENST00000463020 MOGSQ13724 837 aa19.78■□□□□ 0.76
SND1-203ENST00000463020 MTFR1Q15390 333 aa19.78■□□□□ 0.76
SND1-203ENST00000463020 SLC4A8Q2Y0W8 1093 aa19.78■□□□□ 0.76
SND1-203ENST00000463020 ERO1BQ86YB8 467 aa19.78■□□□□ 0.76
SND1-203ENST00000463020 ADGRA2Q96PE1 1338 aa19.77■□□□□ 0.76
SND1-203ENST00000463020 PDE8BO95263 885 aa19.77■□□□□ 0.76
SND1-203ENST00000463020 CETPP11597 493 aa19.77■□□□□ 0.76
SND1-203ENST00000463020 HDLBPQ00341 1268 aaKnown RBP19.77■□□□□ 0.76
SND1-203ENST00000463020 VPS37DQ86XT2 251 aa19.77■□□□□ 0.76
SND1-203ENST00000463020 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.77■□□□□ 0.76
SND1-203ENST00000463020 CPA4Q9UI42 421 aa19.77■□□□□ 0.76
SND1-203ENST00000463020 FGFR2P21802 821 aa19.76■□□□□ 0.75
SND1-203ENST00000463020 PPIL2Q13356 520 aa19.76■□□□□ 0.75
SND1-203ENST00000463020 SNAPC2Q13487 334 aa19.76■□□□□ 0.75
SND1-203ENST00000463020 C17orf99Q6UX52 265 aa19.76■□□□□ 0.75
SND1-203ENST00000463020 TRIM47Q96LD4 638 aa19.76■□□□□ 0.75
SND1-203ENST00000463020 NFIAQ12857 509 aa19.75■□□□□ 0.75
SND1-203ENST00000463020 NBPF11Q86T75 865 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms