RNA–Protein interactions for RNA: ENST00000462165.2

CBX3-205, Transcript of chromobox 3, humanhuman

TSL 3

Gene CBX3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-205ENST00000462165 MFSD14BQ5SR56 506 aa13.79□□□□□ -0.2
CBX3-205ENST00000462165 BEND3Q5T5X7 828 aa13.79□□□□□ -0.2
CBX3-205ENST00000462165 LMBR1LQ6UX01 489 aa13.79□□□□□ -0.2
CBX3-205ENST00000462165 LDHAL6AQ6ZMR3 332 aa13.79□□□□□ -0.2
CBX3-205ENST00000462165 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.79□□□□□ -0.2
CBX3-205ENST00000462165 TDRD7Q8NHU6 1098 aaKnown RBP13.79□□□□□ -0.2
CBX3-205ENST00000462165 BRI3BPQ8WY22 251 aa13.79□□□□□ -0.2
CBX3-205ENST00000462165 TMEM106CQ9BVX2 250 aa13.79□□□□□ -0.2
CBX3-205ENST00000462165 TDRD3Q9H7E2 651 aaKnown RBP13.79□□□□□ -0.2
CBX3-205ENST00000462165 TTF2Q9UNY4 1162 aaKnown RBP13.79□□□□□ -0.2
CBX3-205ENST00000462165 PLIN1O60240 522 aa13.78□□□□□ -0.2
CBX3-205ENST00000462165 VAMP4O75379 141 aa13.78□□□□□ -0.2
CBX3-205ENST00000462165 GTF2A2P52657 109 aa13.78□□□□□ -0.2
CBX3-205ENST00000462165 TAF1CQ15572 869 aaPredicted RBP13.78□□□□□ -0.2
CBX3-205ENST00000462165 TAF7LQ5H9L4 462 aa13.78□□□□□ -0.2
CBX3-205ENST00000462165 EPHA10Q5JZY3 1008 aa13.78□□□□□ -0.2
CBX3-205ENST00000462165 NBPF11Q86T75 865 aa13.78□□□□□ -0.2
CBX3-205ENST00000462165 ZNF594Q96JF6 807 aaPredicted RBP13.78□□□□□ -0.2
CBX3-205ENST00000462165 ZFYVE28Q9HCC9 887 aa13.78□□□□□ -0.2
CBX3-205ENST00000462165 CNNM1Q9NRU3 951 aa13.78□□□□□ -0.2
CBX3-205ENST00000462165 FANCIQ9NVI1 1328 aa13.78□□□□□ -0.2
CBX3-205ENST00000462165 CCL15-CCL14A0A0B4J2E2 113 aa13.77□□□□□ -0.21
CBX3-205ENST00000462165 HIBADHP31937 336 aaKnown RBP13.77□□□□□ -0.21
CBX3-205ENST00000462165 FXR1P51114 621 aaKnown RBP eCLIP13.77□□□□□ -0.21
CBX3-205ENST00000462165 MAP3K9P80192 1104 aa13.77□□□□□ -0.21
CBX3-205ENST00000462165 CCL15Q16663 113 aa13.77□□□□□ -0.21
CBX3-205ENST00000462165 SLC9C1Q4G0N8 1177 aa13.77□□□□□ -0.21
CBX3-205ENST00000462165 CDAN1Q8IWY9 1227 aa13.77□□□□□ -0.21
CBX3-205ENST00000462165 DZIP1LQ8IYY4 767 aaKnown RBP13.77□□□□□ -0.21
CBX3-205ENST00000462165 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.77□□□□□ -0.21
CBX3-205ENST00000462165 PTCH2Q9Y6C5 1203 aa13.77□□□□□ -0.21
CBX3-205ENST00000462165 ZSWIM8A7E2V4 1837 aa13.76□□□□□ -0.21
CBX3-205ENST00000462165 TCP10L2B9ZVM9 353 aa13.76□□□□□ -0.21
CBX3-205ENST00000462165 F6X3S4 739 aa13.76□□□□□ -0.21
CBX3-205ENST00000462165 GRM8O00222 908 aa13.76□□□□□ -0.21
CBX3-205ENST00000462165 CRKP46108 304 aa13.76□□□□□ -0.21
CBX3-205ENST00000462165 GYG1P46976 350 aa13.76□□□□□ -0.21
CBX3-205ENST00000462165 TNNI2P48788 182 aa13.76□□□□□ -0.21
CBX3-205ENST00000462165 VGLL4Q14135 290 aa13.76□□□□□ -0.21
CBX3-205ENST00000462165 FAM84BQ96KN1 310 aaPredicted RBP13.76□□□□□ -0.21
CBX3-205ENST00000462165 TMEM39BQ9GZU3 492 aa13.76□□□□□ -0.21
CBX3-205ENST00000462165 CSADQ9Y600 493 aa13.76□□□□□ -0.21
CBX3-205ENST00000462165 SZT2Q5T011 3432 aa13.75□□□□□ -0.21
CBX3-205ENST00000462165 CCDC184Q52MB2 194 aa13.75□□□□□ -0.21
CBX3-205ENST00000462165 FAM43AQ8N2R8 423 aa13.75□□□□□ -0.21
CBX3-205ENST00000462165 ZCCHC17Q9NP64 241 aaKnown RBP13.75□□□□□ -0.21
CBX3-205ENST00000462165 SPDYE5A6NIY4 337 aa13.74□□□□□ -0.21
CBX3-205ENST00000462165 TLR2O60603 784 aa13.74□□□□□ -0.21
CBX3-205ENST00000462165 HDLBPQ00341 1268 aaKnown RBP13.74□□□□□ -0.21
CBX3-205ENST00000462165 EXOSC9Q06265 439 aaKnown RBP13.74□□□□□ -0.21
CBX3-205ENST00000462165 SLC4A8Q2Y0W8 1093 aa13.74□□□□□ -0.21
CBX3-205ENST00000462165 OTUD5Q96G74 571 aa13.74□□□□□ -0.21
CBX3-205ENST00000462165 WDHD1O75717 1129 aaPredicted RBP13.73□□□□□ -0.21
CBX3-205ENST00000462165 ERO1BQ86YB8 467 aa13.73□□□□□ -0.21
CBX3-205ENST00000462165 WDR63Q8IWG1 891 aa13.73□□□□□ -0.21
CBX3-205ENST00000462165 PUS3Q9BZE2 481 aaKnown RBP13.73□□□□□ -0.21
CBX3-205ENST00000462165 C9orf78Q9NZ63 289 aaPredicted RBP13.73□□□□□ -0.21
CBX3-205ENST00000462165 RIPOR2Q9Y4F9 1068 aa13.73□□□□□ -0.21
CBX3-205ENST00000462165 MROH5Q6ZUA9 1318 aa13.72□□□□□ -0.21
CBX3-205ENST00000462165 ALDH1L1O75891 902 aa13.72□□□□□ -0.21
CBX3-205ENST00000462165 GNRH1P01148 92 aa13.72□□□□□ -0.21
CBX3-205ENST00000462165 CETPP11597 493 aa13.72□□□□□ -0.21
CBX3-205ENST00000462165 LACTBP83111 547 aaPredicted RBP13.72□□□□□ -0.21
CBX3-205ENST00000462165 POLA2Q14181 598 aa13.72□□□□□ -0.21
CBX3-205ENST00000462165 KIF22Q14807 665 aa13.72□□□□□ -0.21
CBX3-205ENST00000462165 GRIK5Q16478 980 aa13.72□□□□□ -0.21
CBX3-205ENST00000462165 FBXO33Q7Z6M2 555 aa13.72□□□□□ -0.21
CBX3-205ENST00000462165 FAM83AQ86UY5 434 aa13.72□□□□□ -0.21
CBX3-205ENST00000462165 TBC1D22AQ8WUA7 517 aa13.72□□□□□ -0.21
CBX3-205ENST00000462165 COLQQ9Y215 455 aaPredicted RBP13.72□□□□□ -0.21
CBX3-205ENST00000462165 SNCAIPQ9Y6H5 919 aa13.72□□□□□ -0.21
CBX3-205ENST00000462165 RANBP2P49792 3224 aaKnown RBP13.71□□□□□ -0.21
CBX3-205ENST00000462165 MYH13Q9UKX3 1938 aa13.71□□□□□ -0.21
CBX3-205ENST00000462165 BTBD19C9JJ37 291 aa13.71□□□□□ -0.21
CBX3-205ENST00000462165 PRMT2P55345 433 aa13.71□□□□□ -0.21
CBX3-205ENST00000462165 FKBP1CQ5VVH2 108 aa13.71□□□□□ -0.21
CBX3-205ENST00000462165 VPS37DQ86XT2 251 aa13.71□□□□□ -0.21
CBX3-205ENST00000462165 SH3TC2Q8TF17 1288 aa13.71□□□□□ -0.21
CBX3-205ENST00000462165 TEKT1Q969V4 418 aa13.71□□□□□ -0.21
CBX3-205ENST00000462165 KAZALD1Q96I82 304 aa13.71□□□□□ -0.21
CBX3-205ENST00000462165 SUCLG2Q96I99 432 aa13.71□□□□□ -0.21
CBX3-205ENST00000462165 MRIQ9BWK5 157 aa13.71□□□□□ -0.21
CBX3-205ENST00000462165 ARHGAP39Q9C0H5 1083 aa13.71□□□□□ -0.21
CBX3-205ENST00000462165 CEP290O15078 2479 aa13.71□□□□□ -0.21
CBX3-205ENST00000462165 IRF6O14896 467 aa13.7□□□□□ -0.22
CBX3-205ENST00000462165 CACNB3P54284 484 aa13.7□□□□□ -0.22
CBX3-205ENST00000462165 CHAF1AQ13111 956 aaPredicted RBP13.7□□□□□ -0.22
CBX3-205ENST00000462165 PPIL2Q13356 520 aa13.7□□□□□ -0.22
CBX3-205ENST00000462165 SNAPC2Q13487 334 aa13.7□□□□□ -0.22
CBX3-205ENST00000462165 ZKSCAN4Q969J2 545 aaPredicted RBP13.7□□□□□ -0.22
CBX3-205ENST00000462165 HOOK2Q96ED9 719 aa13.7□□□□□ -0.22
CBX3-205ENST00000462165 ZDHHC15Q96MV8 337 aa13.7□□□□□ -0.22
CBX3-205ENST00000462165 WRNIP1Q96S55 665 aa13.7□□□□□ -0.22
CBX3-205ENST00000462165 SRCIN1Q9C0H9 1055 aa13.7□□□□□ -0.22
CBX3-205ENST00000462165 IQSEC3Q9UPP2 1182 aaPredicted RBP13.7□□□□□ -0.22
CBX3-205ENST00000462165 RPAP1Q9BWH6 1393 aaPredicted RBP13.7□□□□□ -0.22
CBX3-205ENST00000462165 AK9Q5TCS8 1911 aa13.69□□□□□ -0.22
CBX3-205ENST00000462165 MYCP01106 439 aaPredicted RBP13.69□□□□□ -0.22
CBX3-205ENST00000462165 CAVIN4Q5BKX8 364 aa13.69□□□□□ -0.22
CBX3-205ENST00000462165 APOBEC3HQ6NTF7 200 aaKnown RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms