RNA–Protein interactions for RNA: ENST00000461660.1

ATP13A3-206, Transcript of ATPase 13A3, humanhuman

TSL 1 (best)

Gene ATP13A3, Length 3,517 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-206ENST00000461660 MCTP1Q6DN14 999 aa4.85□□□□□ -1.63
ATP13A3-206ENST00000461660 Q6ZUG5 572 aa4.85□□□□□ -1.63
ATP13A3-206ENST00000461660 DEFB132Q7Z7B7 95 aa4.85□□□□□ -1.63
ATP13A3-206ENST00000461660 FAM84BQ96KN1 310 aaPredicted RBP4.85□□□□□ -1.63
ATP13A3-206ENST00000461660 KRT23Q9C075 422 aa4.85□□□□□ -1.63
ATP13A3-206ENST00000461660 IL25Q9H293 177 aa4.85□□□□□ -1.63
ATP13A3-206ENST00000461660 ZNF287Q9HBT7 754 aa4.85□□□□□ -1.63
ATP13A3-206ENST00000461660 ZSWIM6Q9HCJ5 1215 aa4.85□□□□□ -1.63
ATP13A3-206ENST00000461660 POLRMTO00411 1230 aaKnown RBP4.85□□□□□ -1.63
ATP13A3-206ENST00000461660 PRC1O43663 620 aa4.85□□□□□ -1.63
ATP13A3-206ENST00000461660 CD2BP2O95400 341 aaKnown RBP4.85□□□□□ -1.63
ATP13A3-206ENST00000461660 FGAP02671 866 aa4.85□□□□□ -1.63
ATP13A3-206ENST00000461660 CYP21A2P08686 494 aa4.85□□□□□ -1.63
ATP13A3-206ENST00000461660 FOSBP53539 338 aa4.85□□□□□ -1.63
ATP13A3-206ENST00000461660 SLFNL1Q499Z3 407 aa4.85□□□□□ -1.63
ATP13A3-206ENST00000461660 TMEM67Q5HYA8 995 aa4.85□□□□□ -1.63
ATP13A3-206ENST00000461660 LARP1BQ659C4 914 aaKnown RBP4.85□□□□□ -1.63
ATP13A3-206ENST00000461660 TTLL5Q6EMB2 1281 aa4.85□□□□□ -1.63
ATP13A3-206ENST00000461660 IQCA1Q86XH1 822 aa4.85□□□□□ -1.63
ATP13A3-206ENST00000461660 NECAB1Q8N987 351 aa4.85□□□□□ -1.63
ATP13A3-206ENST00000461660 KIF2CQ99661 725 aa4.85□□□□□ -1.63
ATP13A3-206ENST00000461660 PUS7LQ9H0K6 701 aaKnown RBP4.85□□□□□ -1.63
ATP13A3-206ENST00000461660 PATL2C9JE40 543 aaKnown RBP4.84□□□□□ -1.63
ATP13A3-206ENST00000461660 F8W031 263 aaPredicted RBP4.84□□□□□ -1.63
ATP13A3-206ENST00000461660 RANBP6O60518 1105 aaKnown RBP4.84□□□□□ -1.63
ATP13A3-206ENST00000461660 CDKL5O76039 1030 aa4.84□□□□□ -1.63
ATP13A3-206ENST00000461660 MCM4P33991 863 aa4.84□□□□□ -1.63
ATP13A3-206ENST00000461660 HMGN5P82970 282 aaKnown RBP4.84□□□□□ -1.63
ATP13A3-206ENST00000461660 SKOR2Q2VWA4 1001 aaPredicted RBP4.84□□□□□ -1.63
ATP13A3-206ENST00000461660 ADCK5Q3MIX3 580 aa4.84□□□□□ -1.63
ATP13A3-206ENST00000461660 MFSD14BQ5SR56 506 aa4.84□□□□□ -1.63
ATP13A3-206ENST00000461660 AMIGO3Q86WK7 504 aa4.84□□□□□ -1.63
ATP13A3-206ENST00000461660 CERS3Q8IU89 383 aa4.84□□□□□ -1.63
ATP13A3-206ENST00000461660 SUPT20HQ8NEM7 779 aa4.84□□□□□ -1.63
ATP13A3-206ENST00000461660 ESR2Q92731 530 aa4.84□□□□□ -1.63
ATP13A3-206ENST00000461660 TMOD2Q9NZR1 351 aa4.84□□□□□ -1.63
ATP13A3-206ENST00000461660 DDX49Q9Y6V7 483 aaKnown RBP4.84□□□□□ -1.63
ATP13A3-206ENST00000461660 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.84□□□□□ -1.63
ATP13A3-206ENST00000461660 KLF18A0A0U1RQI7 1052 aa4.84□□□□□ -1.63
ATP13A3-206ENST00000461660 E7EWF7 191 aa4.84□□□□□ -1.63
ATP13A3-206ENST00000461660 CHGBP05060 677 aa4.84□□□□□ -1.63
ATP13A3-206ENST00000461660 TM4SF1P30408 202 aa4.84□□□□□ -1.63
ATP13A3-206ENST00000461660 GTF2IP78347 998 aa4.84□□□□□ -1.63
ATP13A3-206ENST00000461660 GPSM2P81274 684 aa4.84□□□□□ -1.63
ATP13A3-206ENST00000461660 PDE4BQ07343 736 aa4.84□□□□□ -1.63
ATP13A3-206ENST00000461660 CC2D2BQ6DHV5 1058 aa4.84□□□□□ -1.63
ATP13A3-206ENST00000461660 FBXO33Q7Z6M2 555 aa4.84□□□□□ -1.63
ATP13A3-206ENST00000461660 SP8Q8IXZ3 490 aa4.84□□□□□ -1.63
ATP13A3-206ENST00000461660 ANP32BQ92688 251 aaKnown RBP4.84□□□□□ -1.63
ATP13A3-206ENST00000461660 DDX11Q96FC9 970 aa4.84□□□□□ -1.63
ATP13A3-206ENST00000461660 GPR101Q96P66 508 aaPredicted RBP4.84□□□□□ -1.63
ATP13A3-206ENST00000461660 GZF1Q9H116 711 aaPredicted RBP4.84□□□□□ -1.63
ATP13A3-206ENST00000461660 MKNK2Q9HBH9 465 aa4.84□□□□□ -1.63
ATP13A3-206ENST00000461660 AATFQ9NY61 560 aaKnown RBP eCLIP4.84□□□□□ -1.63
ATP13A3-206ENST00000461660 PCDH10Q9P2E7 1040 aa4.84□□□□□ -1.63
ATP13A3-206ENST00000461660 THSD7AQ9UPZ6 1657 aa4.84□□□□□ -1.64
ATP13A3-206ENST00000461660 CCT2P78371 535 aaKnown RBP4.84□□□□□ -1.64
ATP13A3-206ENST00000461660 TMED8Q6PL24 325 aaPredicted RBP4.84□□□□□ -1.64
ATP13A3-206ENST00000461660 CHST3Q7LGC8 479 aa4.84□□□□□ -1.64
ATP13A3-206ENST00000461660 TRIM22Q8IYM9 498 aa4.84□□□□□ -1.64
ATP13A3-206ENST00000461660 IFNL3Q8IZI9 196 aa4.84□□□□□ -1.64
ATP13A3-206ENST00000461660 PROM2Q8N271 834 aa4.84□□□□□ -1.64
ATP13A3-206ENST00000461660 NUP133Q8WUM0 1156 aa4.84□□□□□ -1.64
ATP13A3-206ENST00000461660 TNPO1Q92973 898 aaKnown RBP4.84□□□□□ -1.64
ATP13A3-206ENST00000461660 SYAP1Q96A49 352 aaPredicted RBP4.84□□□□□ -1.64
ATP13A3-206ENST00000461660 STRBPQ96SI9 672 aaKnown RBP4.84□□□□□ -1.64
ATP13A3-206ENST00000461660 RNF39Q9H2S5 420 aa4.84□□□□□ -1.64
ATP13A3-206ENST00000461660 MCM9Q9NXL9 1143 aa4.84□□□□□ -1.64
ATP13A3-206ENST00000461660 ATP6V0A2Q9Y487 856 aa4.84□□□□□ -1.64
ATP13A3-206ENST00000461660 SLC12A7Q9Y666 1083 aa4.84□□□□□ -1.64
ATP13A3-206ENST00000461660 CCDC196A0A1B0GTZ2 297 aa4.83□□□□□ -1.64
ATP13A3-206ENST00000461660 GOLGA8AA7E2F4 631 aa4.83□□□□□ -1.64
ATP13A3-206ENST00000461660 B4E1Z4 1266 aa4.83□□□□□ -1.64
ATP13A3-206ENST00000461660 GJB2P29033 226 aa4.83□□□□□ -1.64
ATP13A3-206ENST00000461660 HOXA10P31260 410 aaPredicted RBP4.83□□□□□ -1.64
ATP13A3-206ENST00000461660 SAFBQ15424 915 aaKnown RBP eCLIP4.83□□□□□ -1.64
ATP13A3-206ENST00000461660 MICU3Q86XE3 530 aa4.83□□□□□ -1.64
ATP13A3-206ENST00000461660 ZSCAN29Q8IWY8 852 aaPredicted RBP4.83□□□□□ -1.64
ATP13A3-206ENST00000461660 TEX11Q8IYF3 940 aa4.83□□□□□ -1.64
ATP13A3-206ENST00000461660 LCORLQ8N3X6 602 aa4.83□□□□□ -1.64
ATP13A3-206ENST00000461660 SLC16A10Q8TF71 515 aa4.83□□□□□ -1.64
ATP13A3-206ENST00000461660 AKT1S1Q96B36 256 aa4.83□□□□□ -1.64
ATP13A3-206ENST00000461660 COA1Q9GZY4 146 aa4.83□□□□□ -1.64
ATP13A3-206ENST00000461660 CD209Q9NNX6 404 aa4.83□□□□□ -1.64
ATP13A3-206ENST00000461660 TJP1Q07157 1748 aa4.83□□□□□ -1.64
ATP13A3-206ENST00000461660 N4BP2Q86UW6 1770 aaPredicted RBP4.83□□□□□ -1.64
ATP13A3-206ENST00000461660 NHSQ6T4R5 1651 aa4.83□□□□□ -1.64
ATP13A3-206ENST00000461660 BTAF1O14981 1849 aa4.83□□□□□ -1.64
ATP13A3-206ENST00000461660 WNK3Q9BYP7 1800 aa4.83□□□□□ -1.64
ATP13A3-206ENST00000461660 TSPY2A6NKD2 308 aa4.83□□□□□ -1.64
ATP13A3-206ENST00000461660 PPIP5K2O43314 1243 aa4.83□□□□□ -1.64
ATP13A3-206ENST00000461660 KDM4AO75164 1064 aa4.83□□□□□ -1.64
ATP13A3-206ENST00000461660 APOBRQ0VD83 1088 aa4.83□□□□□ -1.64
ATP13A3-206ENST00000461660 WTAPQ15007 396 aa4.83□□□□□ -1.64
ATP13A3-206ENST00000461660 DOK7Q18PE1 504 aa4.83□□□□□ -1.64
ATP13A3-206ENST00000461660 AKNAD1Q5T1N1 836 aa4.83□□□□□ -1.64
ATP13A3-206ENST00000461660 CCDC125Q86Z20 511 aa4.83□□□□□ -1.64
ATP13A3-206ENST00000461660 ZNF444Q8N0Y2 327 aaPredicted RBP4.83□□□□□ -1.64
ATP13A3-206ENST00000461660 TBC1D16Q8TBP0 767 aa4.83□□□□□ -1.64
ATP13A3-206ENST00000461660 SDR42E1Q8WUS8 393 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms