RNA–Protein interactions for RNA: ENST00000460925.1

SF3A3-202, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-202ENST00000460925 ZNF76P36508 570 aa6.79□□□□□ -1.32
SF3A3-202ENST00000460925 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.79□□□□□ -1.321e-14■■■□□ 16.9
SF3A3-202ENST00000460925 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.79□□□□□ -1.32
SF3A3-202ENST00000460925 NAALADL2Q58DX5 795 aa6.79□□□□□ -1.32
SF3A3-202ENST00000460925 GALNT12Q8IXK2 581 aa6.79□□□□□ -1.32
SF3A3-202ENST00000460925 PGBD3Q8N328 593 aa6.79□□□□□ -1.32
SF3A3-202ENST00000460925 SREK1Q8WXA9 508 aaKnown RBP6.79□□□□□ -1.32
SF3A3-202ENST00000460925 ZFP42Q96MM3 310 aa6.79□□□□□ -1.32
SF3A3-202ENST00000460925 CHRDQ9H2X0 955 aa6.79□□□□□ -1.32
SF3A3-202ENST00000460925 USP35Q9P2H5 1018 aa6.79□□□□□ -1.32
SF3A3-202ENST00000460925 DNMT3LQ9UJW3 386 aa6.79□□□□□ -1.32
SF3A3-202ENST00000460925 GJA3Q9Y6H8 435 aa6.79□□□□□ -1.32
SF3A3-202ENST00000460925 ROBO2Q9HCK4 1378 aa6.79□□□□□ -1.32
SF3A3-202ENST00000460925 RGPD8O14715 1765 aaPredicted RBP6.78□□□□□ -1.32
SF3A3-202ENST00000460925 TULP4Q9NRJ4 1543 aa6.78□□□□□ -1.32
SF3A3-202ENST00000460925 SENP3-EIF4A1A0A087X0R7 540 aa6.78□□□□□ -1.32
SF3A3-202ENST00000460925 FIGNL2A6NMB9 653 aa6.78□□□□□ -1.32
SF3A3-202ENST00000460925 FAM157BP0CG42 384 aa6.78□□□□□ -1.32
SF3A3-202ENST00000460925 KCNA6P17658 529 aa6.78□□□□□ -1.32
SF3A3-202ENST00000460925 VEGFBP49765 207 aa6.78□□□□□ -1.32
SF3A3-202ENST00000460925 WAPLQ7Z5K2 1190 aa6.78□□□□□ -1.32
SF3A3-202ENST00000460925 NLRP13Q86W25 1043 aa6.78□□□□□ -1.32
SF3A3-202ENST00000460925 NT5DC4Q86YG4 428 aa6.78□□□□□ -1.32
SF3A3-202ENST00000460925 TGIF2Q9GZN2 237 aa6.78□□□□□ -1.32
SF3A3-202ENST00000460925 RUBCNLQ9H714 662 aa6.78□□□□□ -1.32
SF3A3-202ENST00000460925 BRD7Q9NPI1 651 aa6.78□□□□□ -1.32
SF3A3-202ENST00000460925 NLRP2Q9NX02 1062 aa6.78□□□□□ -1.32
SF3A3-202ENST00000460925 ABI2Q9NYB9 513 aaPredicted RBP6.78□□□□□ -1.32
SF3A3-202ENST00000460925 LRPPRCP42704 1394 aaKnown RBP6.78□□□□□ -1.32
SF3A3-202ENST00000460925 DLC1Q96QB1 1528 aa6.77□□□□□ -1.33
SF3A3-202ENST00000460925 EFSO43281 561 aa6.77□□□□□ -1.33
SF3A3-202ENST00000460925 PTPN12Q05209 780 aaKnown RBP6.77□□□□□ -1.33
SF3A3-202ENST00000460925 EFHC2Q5JST6 749 aa6.77□□□□□ -1.33
SF3A3-202ENST00000460925 FIGNL1Q6PIW4 674 aa6.77□□□□□ -1.33
SF3A3-202ENST00000460925 EPS8L3Q8TE67 593 aaKnown RBP6.77□□□□□ -1.33
SF3A3-202ENST00000460925 DRC1Q96MC2 740 aa6.77□□□□□ -1.33
SF3A3-202ENST00000460925 OSBPL7Q9BZF2 842 aa6.77□□□□□ -1.33
SF3A3-202ENST00000460925 ZCCHC2Q9C0B9 1178 aaKnown RBP6.77□□□□□ -1.33
SF3A3-202ENST00000460925 GPAMQ9HCL2 828 aa6.77□□□□□ -1.33
SF3A3-202ENST00000460925 FAM8A1Q9UBU6 413 aa6.77□□□□□ -1.33
SF3A3-202ENST00000460925 TBX22Q9Y458 520 aa6.77□□□□□ -1.33
SF3A3-202ENST00000460925 MYOM1P52179 1685 aa6.77□□□□□ -1.33
SF3A3-202ENST00000460925 TECPR2O15040 1411 aa6.76□□□□□ -1.33
SF3A3-202ENST00000460925 PTCH1Q13635 1447 aa6.76□□□□□ -1.33
SF3A3-202ENST00000460925 ST20-MTHFSA0A0A6YYL1 179 aa6.76□□□□□ -1.33
SF3A3-202ENST00000460925 NRG2O14511 850 aaPredicted RBP6.76□□□□□ -1.33
SF3A3-202ENST00000460925 AXIN1O15169 862 aa6.76□□□□□ -1.33
SF3A3-202ENST00000460925 ST13P50502 369 aaKnown RBP6.76□□□□□ -1.33
SF3A3-202ENST00000460925 LAMC2Q13753 1193 aa6.76□□□□□ -1.33
SF3A3-202ENST00000460925 SF3A1Q15459 793 aaKnown RBP6.76□□□□□ -1.33
SF3A3-202ENST00000460925 C9orf131Q5VYM1 1079 aa6.76□□□□□ -1.33
SF3A3-202ENST00000460925 PI16Q6UXB8 463 aa6.76□□□□□ -1.33
SF3A3-202ENST00000460925 C1orf127Q8N9H9 656 aa6.76□□□□□ -1.33
SF3A3-202ENST00000460925 PRAM1Q96QH2 718 aa6.76□□□□□ -1.33
SF3A3-202ENST00000460925 EFCC1Q9HA90 598 aa6.76□□□□□ -1.33
SF3A3-202ENST00000460925 CNTN3Q9P232 1028 aa6.76□□□□□ -1.33
SF3A3-202ENST00000460925 KCNH4Q9UQ05 1017 aa6.76□□□□□ -1.33
SF3A3-202ENST00000460925 USP31Q70CQ4 1352 aa6.76□□□□□ -1.33
SF3A3-202ENST00000460925 DISP3Q9P2K9 1392 aa6.76□□□□□ -1.33
SF3A3-202ENST00000460925 LTBP4Q8N2S1 1624 aa6.76□□□□□ -1.33
SF3A3-202ENST00000460925 NKTRP30414 1462 aaKnown RBP6.75□□□□□ -1.33
SF3A3-202ENST00000460925 ABCC11Q96J66 1382 aa6.75□□□□□ -1.33
SF3A3-202ENST00000460925 THBS1P07996 1170 aa6.75□□□□□ -1.33
SF3A3-202ENST00000460925 IRS1P35568 1242 aa6.75□□□□□ -1.33
SF3A3-202ENST00000460925 UBAP2LQ14157 1087 aaKnown RBP6.75□□□□□ -1.33
SF3A3-202ENST00000460925 PKDCCQ504Y2 493 aa6.75□□□□□ -1.33
SF3A3-202ENST00000460925 KIAA0319Q5VV43 1072 aa6.75□□□□□ -1.33
SF3A3-202ENST00000460925 SLC43A3Q8NBI5 491 aa6.75□□□□□ -1.33
SF3A3-202ENST00000460925 ANP32EQ9BTT0 268 aa6.75□□□□□ -1.33
SF3A3-202ENST00000460925 PCDHGC4Q9Y5F7 938 aa6.75□□□□□ -1.33
SF3A3-202ENST00000460925 FMN2Q9NZ56 1722 aa6.75□□□□□ -1.33
SF3A3-202ENST00000460925 USP32Q8NFA0 1604 aa6.75□□□□□ -1.33
SF3A3-202ENST00000460925 CENPJQ9HC77 1338 aaPredicted RBP6.75□□□□□ -1.33
SF3A3-202ENST00000460925 ADGRB2O60241 1585 aa6.74□□□□□ -1.33
SF3A3-202ENST00000460925 C11orf95C9JLR9 678 aaPredicted RBP6.74□□□□□ -1.33
SF3A3-202ENST00000460925 EREGO14944 169 aa6.74□□□□□ -1.33
SF3A3-202ENST00000460925 ATXN7O15265 892 aaPredicted RBP6.74□□□□□ -1.33
SF3A3-202ENST00000460925 CDK11BP21127 795 aaKnown RBP6.74□□□□□ -1.33
SF3A3-202ENST00000460925 CCINQ13939 588 aa6.74□□□□□ -1.33
SF3A3-202ENST00000460925 TTC39BQ5VTQ0 682 aaPredicted RBP6.74□□□□□ -1.33
SF3A3-202ENST00000460925 OR13H1Q8NG92 308 aa6.74□□□□□ -1.33
SF3A3-202ENST00000460925 GAS2L1Q99501 681 aaPredicted RBP6.74□□□□□ -1.33
SF3A3-202ENST00000460925 TINF2Q9BSI4 451 aa6.74□□□□□ -1.33
SF3A3-202ENST00000460925 POLR3GLQ9BT43 218 aa6.74□□□□□ -1.33
SF3A3-202ENST00000460925 GSX2Q9BZM3 304 aa6.74□□□□□ -1.33
SF3A3-202ENST00000460925 SUV39H2Q9H5I1 410 aa6.74□□□□□ -1.33
SF3A3-202ENST00000460925 NPHS2Q9NP85 383 aa6.74□□□□□ -1.33
SF3A3-202ENST00000460925 NDFIP2Q9NV92 336 aa6.74□□□□□ -1.33
SF3A3-202ENST00000460925 LRRC7Q96NW7 1537 aa6.74□□□□□ -1.33
SF3A3-202ENST00000460925 TMEM94Q12767 1356 aa6.73□□□□□ -1.33
SF3A3-202ENST00000460925 EIF3AQ14152 1382 aaKnown RBP6.73□□□□□ -1.33
SF3A3-202ENST00000460925 PIK3R4Q99570 1358 aa6.73□□□□□ -1.33
SF3A3-202ENST00000460925 SLC35F4A4IF30 521 aa6.73□□□□□ -1.33
SF3A3-202ENST00000460925 MAN1A2O60476 641 aa6.73□□□□□ -1.33
SF3A3-202ENST00000460925 HOXD8P13378 290 aaPredicted RBP6.73□□□□□ -1.33
SF3A3-202ENST00000460925 CES1P23141 567 aa6.73□□□□□ -1.33
SF3A3-202ENST00000460925 TAF1CQ15572 869 aaPredicted RBP6.73□□□□□ -1.33
SF3A3-202ENST00000460925 ANKRD24Q8TF21 1146 aa6.73□□□□□ -1.33
SF3A3-202ENST00000460925 GMCL1Q96IK5 515 aa6.73□□□□□ -1.33
SF3A3-202ENST00000460925 TESK2Q96S53 571 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms