RNA–Protein interactions for RNA: ENST00000460194.1

SRRT-206, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-206ENST00000460194 CD99L2Q8TCZ2 262 aa16.74■□□□□ 0.27
SRRT-206ENST00000460194 CNKSR2Q8WXI2 1034 aa16.74■□□□□ 0.27
SRRT-206ENST00000460194 ARMC5Q96C12 935 aa16.74■□□□□ 0.27
SRRT-206ENST00000460194 MRS2Q9HD23 443 aa16.74■□□□□ 0.27
SRRT-206ENST00000460194 CNNM1Q9NRU3 951 aa16.74■□□□□ 0.27
SRRT-206ENST00000460194 SALL2Q9Y467 1007 aaPredicted RBP16.74■□□□□ 0.27
SRRT-206ENST00000460194 ZSWIM8A7E2V4 1837 aa16.73■□□□□ 0.27
SRRT-206ENST00000460194 TNFAIP1Q13829 316 aa16.73■□□□□ 0.27
SRRT-206ENST00000460194 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.73■□□□□ 0.27
SRRT-206ENST00000460194 OPTNQ96CV9 577 aa16.73■□□□□ 0.27
SRRT-206ENST00000460194 ERO1AQ96HE7 468 aa16.73■□□□□ 0.27
SRRT-206ENST00000460194 SRCIN1Q9C0H9 1055 aa16.73■□□□□ 0.27
SRRT-206ENST00000460194 ELP3Q9H9T3 547 aa16.73■□□□□ 0.27
SRRT-206ENST00000460194 C9orf78Q9NZ63 289 aaPredicted RBP16.73■□□□□ 0.27
SRRT-206ENST00000460194 ZNF521Q96K83 1311 aa16.72■□□□□ 0.27
SRRT-206ENST00000460194 CRKP46108 304 aa16.72■□□□□ 0.27
SRRT-206ENST00000460194 RBM5P52756 815 aaKnown RBP eCLIP16.72■□□□□ 0.27
SRRT-206ENST00000460194 SP3Q02447 781 aa16.72■□□□□ 0.27
SRRT-206ENST00000460194 ANKRD44Q8N8A2 993 aa16.72■□□□□ 0.27
SRRT-206ENST00000460194 BRI3BPQ8WY22 251 aa16.72■□□□□ 0.27
SRRT-206ENST00000460194 TMEM39BQ9GZU3 492 aa16.72■□□□□ 0.27
SRRT-206ENST00000460194 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.72■□□□□ 0.27
SRRT-206ENST00000460194 HDLBPQ00341 1268 aaKnown RBP16.71■□□□□ 0.27
SRRT-206ENST00000460194 VGLL4Q14135 290 aa16.71■□□□□ 0.27
SRRT-206ENST00000460194 TAF7LQ5H9L4 462 aa16.71■□□□□ 0.27
SRRT-206ENST00000460194 OTUD7BQ6GQQ9 843 aa16.71■□□□□ 0.27
SRRT-206ENST00000460194 MRIQ9BWK5 157 aa16.71■□□□□ 0.27
SRRT-206ENST00000460194 MROH5Q6ZUA9 1318 aa16.7■□□□□ 0.26
SRRT-206ENST00000460194 MYH13Q9UKX3 1938 aa16.7■□□□□ 0.26
SRRT-206ENST00000460194 TCP10L2B9ZVM9 353 aa16.7■□□□□ 0.26
SRRT-206ENST00000460194 MAP3K9P80192 1104 aa16.7■□□□□ 0.26
SRRT-206ENST00000460194 LRRC24Q50LG9 513 aa16.7■□□□□ 0.26
SRRT-206ENST00000460194 BICC1Q9H694 974 aaKnown RBP16.7■□□□□ 0.26
SRRT-206ENST00000460194 EFCC1Q9HA90 598 aa16.7■□□□□ 0.26
SRRT-206ENST00000460194 SLC4A10Q6U841 1118 aa16.69■□□□□ 0.26
SRRT-206ENST00000460194 FAM43AQ8N2R8 423 aa16.69■□□□□ 0.26
SRRT-206ENST00000460194 SNCAIPQ9Y6H5 919 aa16.69■□□□□ 0.26
SRRT-206ENST00000460194 SPDYE5A6NIY4 337 aa16.68■□□□□ 0.26
SRRT-206ENST00000460194 PDE8BO95263 885 aa16.68■□□□□ 0.26
SRRT-206ENST00000460194 FGFR2P21802 821 aa16.68■□□□□ 0.26
SRRT-206ENST00000460194 APOBEC3HQ6NTF7 200 aaKnown RBP16.68■□□□□ 0.26
SRRT-206ENST00000460194 ZNF333Q96JL9 665 aa16.68■□□□□ 0.26
SRRT-206ENST00000460194 ZDHHC15Q96MV8 337 aa16.68■□□□□ 0.26
SRRT-206ENST00000460194 IQSEC3Q9UPP2 1182 aaPredicted RBP16.68■□□□□ 0.26
SRRT-206ENST00000460194 CCL15-CCL14A0A0B4J2E2 113 aa16.67■□□□□ 0.26
SRRT-206ENST00000460194 EN2P19622 333 aaPredicted RBP16.67■□□□□ 0.26
SRRT-206ENST00000460194 GTF2A2P52657 109 aa16.67■□□□□ 0.26
SRRT-206ENST00000460194 CACNB3P54284 484 aa16.67■□□□□ 0.26
SRRT-206ENST00000460194 CCL15Q16663 113 aa16.67■□□□□ 0.26
SRRT-206ENST00000460194 MRPL50Q8N5N7 158 aaKnown RBP16.67■□□□□ 0.26
SRRT-206ENST00000460194 TNNI2P48788 182 aa16.66■□□□□ 0.26
SRRT-206ENST00000460194 BCAMP50895 628 aa16.66■□□□□ 0.26
SRRT-206ENST00000460194 FKBP1CQ5VVH2 108 aa16.66■□□□□ 0.26
SRRT-206ENST00000460194 FAM83AQ86UY5 434 aa16.66■□□□□ 0.26
SRRT-206ENST00000460194 TBC1D22AQ8WUA7 517 aa16.66■□□□□ 0.26
SRRT-206ENST00000460194 USP44Q9H0E7 712 aa16.66■□□□□ 0.26
SRRT-206ENST00000460194 KIF16BQ96L93 1317 aa16.66■□□□□ 0.26
SRRT-206ENST00000460194 RFX5P48382 616 aaPredicted RBP16.65■□□□□ 0.26
SRRT-206ENST00000460194 TAF1CQ15572 869 aaPredicted RBP16.65■□□□□ 0.26
SRRT-206ENST00000460194 HABP4Q5JVS0 413 aaKnown RBP16.65■□□□□ 0.26
SRRT-206ENST00000460194 KLHDC4Q8TBB5 520 aa16.65■□□□□ 0.26
SRRT-206ENST00000460194 OTUD5Q96G74 571 aa16.65■□□□□ 0.26
SRRT-206ENST00000460194 PTCH2Q9Y6C5 1203 aa16.65■□□□□ 0.26
SRRT-206ENST00000460194 RPAP1Q9BWH6 1393 aaPredicted RBP16.64■□□□□ 0.26
SRRT-206ENST00000460194 IRF6O14896 467 aa16.64■□□□□ 0.25
SRRT-206ENST00000460194 TLR2O60603 784 aa16.64■□□□□ 0.25
SRRT-206ENST00000460194 ERO1BQ86YB8 467 aa16.64■□□□□ 0.25
SRRT-206ENST00000460194 ZKSCAN4Q969J2 545 aaPredicted RBP16.64■□□□□ 0.25
SRRT-206ENST00000460194 TEKT1Q969V4 418 aa16.64■□□□□ 0.25
SRRT-206ENST00000460194 GCC1Q96CN9 775 aa16.64■□□□□ 0.25
SRRT-206ENST00000460194 ARHGAP39Q9C0H5 1083 aa16.64■□□□□ 0.25
SRRT-206ENST00000460194 ZFYVE28Q9HCC9 887 aa16.64■□□□□ 0.25
SRRT-206ENST00000460194 ZCCHC17Q9NP64 241 aaKnown RBP16.64■□□□□ 0.25
SRRT-206ENST00000460194 SUGT1Q9Y2Z0 365 aa16.64■□□□□ 0.25
SRRT-206ENST00000460194 CEP290O15078 2479 aa16.63■□□□□ 0.25
SRRT-206ENST00000460194 BTBD19C9JJ37 291 aa16.63■□□□□ 0.25
SRRT-206ENST00000460194 CHAF1AQ13111 956 aaPredicted RBP16.63■□□□□ 0.25
SRRT-206ENST00000460194 CAVIN4Q5BKX8 364 aa16.63■□□□□ 0.25
SRRT-206ENST00000460194 METTL24Q5JXM2 366 aa16.63■□□□□ 0.25
SRRT-206ENST00000460194 HHIPL2Q6UWX4 724 aa16.63■□□□□ 0.25
SRRT-206ENST00000460194 CSADQ9Y600 493 aa16.63■□□□□ 0.25
SRRT-206ENST00000460194 ANP32CO43423 234 aa16.62■□□□□ 0.25
SRRT-206ENST00000460194 CTGFP29279 349 aa16.62■□□□□ 0.25
SRRT-206ENST00000460194 ZNF112Q9UJU3 913 aa16.62■□□□□ 0.25
SRRT-206ENST00000460194 ADGRA2Q96PE1 1338 aa16.62■□□□□ 0.25
SRRT-206ENST00000460194 AK9Q5TCS8 1911 aa16.61■□□□□ 0.25
SRRT-206ENST00000460194 CETPP11597 493 aa16.61■□□□□ 0.25
SRRT-206ENST00000460194 LACTBP83111 547 aaPredicted RBP16.61■□□□□ 0.25
SRRT-206ENST00000460194 PPIL2Q13356 520 aa16.61■□□□□ 0.25
SRRT-206ENST00000460194 MOGSQ13724 837 aa16.61■□□□□ 0.25
SRRT-206ENST00000460194 C17orf99Q6UX52 265 aa16.61■□□□□ 0.25
SRRT-206ENST00000460194 ATG9AQ7Z3C6 839 aa16.61■□□□□ 0.25
SRRT-206ENST00000460194 VPS37DQ86XT2 251 aa16.61■□□□□ 0.25
SRRT-206ENST00000460194 WRNIP1Q96S55 665 aa16.61■□□□□ 0.25
SRRT-206ENST00000460194 PTPRCP08575 1304 aa16.61■□□□□ 0.25
SRRT-206ENST00000460194 MGAMO43451 1857 aa16.61■□□□□ 0.25
SRRT-206ENST00000460194 INPP5BP32019 993 aa16.6■□□□□ 0.25
SRRT-206ENST00000460194 PUM3Q15397 648 aaKnown RBP16.6■□□□□ 0.25
SRRT-206ENST00000460194 SSH1Q8WYL5 1049 aa16.6■□□□□ 0.25
SRRT-206ENST00000460194 PTPRFP10586 1907 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms