RNA–Protein interactions for RNA: ENST00000457888.2

UBDP1-202, Transcript of ubiquitin D pseudogene 1, humanhuman

BASIC

Gene UBDP1, Length 382 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBDP1-202ENST00000457888 NXPE3Q969Y0 559 aa6.88□□□□□ -1.31
UBDP1-202ENST00000457888 SOX17Q9H6I2 414 aaPredicted RBP6.88□□□□□ -1.31
UBDP1-202ENST00000457888 HMGXB3Q12766 1538 aa6.87□□□□□ -1.31
UBDP1-202ENST00000457888 BAZ1BQ9UIG0 1483 aaKnown RBP6.87□□□□□ -1.31
UBDP1-202ENST00000457888 SOX4Q06945 474 aaPredicted RBP6.87□□□□□ -1.31
UBDP1-202ENST00000457888 PMEPA1Q969W9 287 aa6.87□□□□□ -1.31
UBDP1-202ENST00000457888 OSMRQ99650 979 aa6.87□□□□□ -1.31
UBDP1-202ENST00000457888 ZC3H7BQ9UGR2 993 aaKnown RBP6.87□□□□□ -1.31
UBDP1-202ENST00000457888 PCSK2P16519 638 aa6.86□□□□□ -1.31
UBDP1-202ENST00000457888 ZNF648Q5T619 568 aaPredicted RBP6.86□□□□□ -1.31
UBDP1-202ENST00000457888 EDEM1Q92611 657 aa6.86□□□□□ -1.31
UBDP1-202ENST00000457888 ZKSCAN3Q9BRR0 538 aa6.86□□□□□ -1.31
UBDP1-202ENST00000457888 CHRDQ9H2X0 955 aa6.86□□□□□ -1.31
UBDP1-202ENST00000457888 LRRC4CQ9HCJ2 640 aa6.86□□□□□ -1.31
UBDP1-202ENST00000457888 ARID3CA6NKF2 412 aa6.85□□□□□ -1.31
UBDP1-202ENST00000457888 BIN1O00499 593 aa6.85□□□□□ -1.31
UBDP1-202ENST00000457888 CYP27A1Q02318 531 aa6.85□□□□□ -1.31
UBDP1-202ENST00000457888 GGNBP2Q9H3C7 697 aa6.85□□□□□ -1.31
UBDP1-202ENST00000457888 DBX1A6NMT0 343 aa6.84□□□□□ -1.31
UBDP1-202ENST00000457888 ESRRAP11474 423 aaPredicted RBP6.84□□□□□ -1.31
UBDP1-202ENST00000457888 GSTM4Q03013 218 aa6.84□□□□□ -1.31
UBDP1-202ENST00000457888 ZNF124Q15973 351 aa6.84□□□□□ -1.31
UBDP1-202ENST00000457888 FBLN7Q53RD9 439 aa6.84□□□□□ -1.31
UBDP1-202ENST00000457888 ZNF765Q7L2R6 523 aa6.84□□□□□ -1.31
UBDP1-202ENST00000457888 TTC16Q8NEE8 873 aa6.84□□□□□ -1.31
UBDP1-202ENST00000457888 SLC5A6Q9Y289 635 aa6.84□□□□□ -1.31
UBDP1-202ENST00000457888 CCDC88BA6NC98 1476 aa6.84□□□□□ -1.31
UBDP1-202ENST00000457888 EIF4EBP3O60516 100 aaPredicted RBP6.83□□□□□ -1.32
UBDP1-202ENST00000457888 PDGFAP04085 211 aa6.83□□□□□ -1.32
UBDP1-202ENST00000457888 NFICP08651 508 aa6.83□□□□□ -1.32
UBDP1-202ENST00000457888 ADH5P11766 374 aa6.83□□□□□ -1.32
UBDP1-202ENST00000457888 DNM1Q05193 864 aaKnown RBP6.83□□□□□ -1.32
UBDP1-202ENST00000457888 MAP7Q14244 749 aa6.83□□□□□ -1.32
UBDP1-202ENST00000457888 PLCL1Q15111 1095 aa6.83□□□□□ -1.32
UBDP1-202ENST00000457888 C8orf34Q49A92 452 aa6.83□□□□□ -1.32
UBDP1-202ENST00000457888 ASAP3Q8TDY4 903 aa6.83□□□□□ -1.32
UBDP1-202ENST00000457888 BCL7CQ8WUZ0 217 aaPredicted RBP6.83□□□□□ -1.32
UBDP1-202ENST00000457888 ACTL7BQ9Y614 415 aa6.83□□□□□ -1.32
UBDP1-202ENST00000457888 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.83□□□□□ -1.32
UBDP1-202ENST00000457888 TOP2AP11388 1531 aaKnown RBP6.82□□□□□ -1.32
UBDP1-202ENST00000457888 A6NHS1 94 aa6.82□□□□□ -1.32
UBDP1-202ENST00000457888 RAB6AP20340 208 aa6.82□□□□□ -1.32
UBDP1-202ENST00000457888 ZNF792Q3KQV3 632 aa6.82□□□□□ -1.32
UBDP1-202ENST00000457888 CLP1Q92989 425 aaKnown RBP6.82□□□□□ -1.32
UBDP1-202ENST00000457888 ARID3AQ99856 593 aa6.82□□□□□ -1.32
UBDP1-202ENST00000457888 BHLHE41Q9C0J9 482 aaPredicted RBP6.82□□□□□ -1.32
UBDP1-202ENST00000457888 SEPT3Q9UH03 358 aa6.82□□□□□ -1.32
UBDP1-202ENST00000457888 CARMIL2Q6F5E8 1435 aa6.82□□□□□ -1.32
UBDP1-202ENST00000457888 NESP48681 1621 aa6.81□□□□□ -1.32
UBDP1-202ENST00000457888 EDN3P14138 238 aa6.81□□□□□ -1.32
UBDP1-202ENST00000457888 TMEM164Q5U3C3 297 aa6.81□□□□□ -1.32
UBDP1-202ENST00000457888 ZNF574Q6ZN55 896 aaPredicted RBP6.81□□□□□ -1.32
UBDP1-202ENST00000457888 SEMA6CQ9H3T2 930 aa6.81□□□□□ -1.32
UBDP1-202ENST00000457888 ZNF777Q9ULD5 760 aaPredicted RBP6.81□□□□□ -1.32
UBDP1-202ENST00000457888 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.8□□□□□ -1.32
UBDP1-202ENST00000457888 EREGO14944 169 aa6.8□□□□□ -1.32
UBDP1-202ENST00000457888 FARP2O94887 1054 aaPredicted RBP6.8□□□□□ -1.32
UBDP1-202ENST00000457888 MZF1P28698 734 aaPredicted RBP6.8□□□□□ -1.32
UBDP1-202ENST00000457888 SPOCD1Q6ZMY3 1216 aa6.8□□□□□ -1.32
UBDP1-202ENST00000457888 WFDC3Q8IUB2 231 aa6.8□□□□□ -1.32
UBDP1-202ENST00000457888 STK11IPQ8N1F8 1099 aa6.8□□□□□ -1.32
UBDP1-202ENST00000457888 NRSN2Q9GZP1 204 aa6.8□□□□□ -1.32
UBDP1-202ENST00000457888 PHACTR2O75167 634 aa6.79□□□□□ -1.32
UBDP1-202ENST00000457888 ATG7O95352 703 aa6.79□□□□□ -1.32
UBDP1-202ENST00000457888 PKN1Q16512 942 aa6.79□□□□□ -1.32
UBDP1-202ENST00000457888 NOM1Q5C9Z4 860 aaKnown RBP6.79□□□□□ -1.32
UBDP1-202ENST00000457888 SPRED2Q7Z698 418 aa6.79□□□□□ -1.32
UBDP1-202ENST00000457888 ACSS3Q9H6R3 686 aa6.79□□□□□ -1.32
UBDP1-202ENST00000457888 AKAP4Q5JQC9 854 aa6.78□□□□□ -1.32
UBDP1-202ENST00000457888 HP1BP3Q5SSJ5 553 aaPredicted RBP6.78□□□□□ -1.32
UBDP1-202ENST00000457888 DYMQ7RTS9 669 aa6.78□□□□□ -1.32
UBDP1-202ENST00000457888 ATG4DQ86TL0 474 aaPredicted RBP6.78□□□□□ -1.32
UBDP1-202ENST00000457888 HELQQ8TDG4 1101 aa6.78□□□□□ -1.32
UBDP1-202ENST00000457888 C1GALT1Q9NS00 363 aa6.78□□□□□ -1.32
UBDP1-202ENST00000457888 FAM105AQ9NUU6 356 aa6.78□□□□□ -1.32
UBDP1-202ENST00000457888 CADPSQ9ULU8 1353 aa6.78□□□□□ -1.32
UBDP1-202ENST00000457888 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.77□□□□□ -1.33
UBDP1-202ENST00000457888 TNFRSF21O75509 655 aa6.77□□□□□ -1.33
UBDP1-202ENST00000457888 MAOBP27338 520 aa6.77□□□□□ -1.33
UBDP1-202ENST00000457888 SRPK2P78362 688 aaKnown RBP6.77□□□□□ -1.33
UBDP1-202ENST00000457888 OGFOD3Q6PK18 319 aa6.77□□□□□ -1.33
UBDP1-202ENST00000457888 SEZ6L2Q6UXD5 910 aa6.77□□□□□ -1.33
UBDP1-202ENST00000457888 FAM168AQ92567 244 aa6.77□□□□□ -1.33
UBDP1-202ENST00000457888 MISP3Q96FF7 219 aa6.77□□□□□ -1.33
UBDP1-202ENST00000457888 LATS2Q9NRM7 1088 aa6.77□□□□□ -1.33
UBDP1-202ENST00000457888 CYP11A1P05108 521 aa6.76□□□□□ -1.33
UBDP1-202ENST00000457888 CTSBP07858 339 aa6.76□□□□□ -1.33
UBDP1-202ENST00000457888 ATP2B4P23634 1241 aa6.76□□□□□ -1.33
UBDP1-202ENST00000457888 PEAR1Q5VY43 1037 aaPredicted RBP6.76□□□□□ -1.33
UBDP1-202ENST00000457888 KSR1Q8IVT5 923 aa6.76□□□□□ -1.33
UBDP1-202ENST00000457888 SNX29Q8TEQ0 813 aa6.76□□□□□ -1.33
UBDP1-202ENST00000457888 KRTAP4-11Q9BYQ6 195 aa6.76□□□□□ -1.33
UBDP1-202ENST00000457888 RAD18Q9NS91 495 aa6.76□□□□□ -1.33
UBDP1-202ENST00000457888 SLAIN2Q9P270 581 aa6.76□□□□□ -1.33
UBDP1-202ENST00000457888 AP4E1Q9UPM8 1137 aa6.76□□□□□ -1.33
UBDP1-202ENST00000457888 CFTRP13569 1480 aa6.75□□□□□ -1.33
UBDP1-202ENST00000457888 METTL12A8MUP2 240 aa6.75□□□□□ -1.33
UBDP1-202ENST00000457888 DYNC1LI2O43237 492 aaPredicted RBP6.75□□□□□ -1.33
UBDP1-202ENST00000457888 FUT4P22083 530 aa6.75□□□□□ -1.33
UBDP1-202ENST00000457888 ASPAP45381 313 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms