RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 ADORA1P30542 326 aa20.08■□□□□ 0.8
CPSF6-203ENST00000456847 PHKA1P46020 1223 aa20.08■□□□□ 0.8
CPSF6-203ENST00000456847 PANK1Q8TE04 598 aa20.08■□□□□ 0.8
CPSF6-203ENST00000456847 TDRD3Q9H7E2 651 aaKnown RBP20.08■□□□□ 0.8
CPSF6-203ENST00000456847 A0A1B0GUL7 405 aa20.07■□□□□ 0.8
CPSF6-203ENST00000456847 SLC10A3P09131 477 aa20.07■□□□□ 0.8
CPSF6-203ENST00000456847 MS4A1P11836 297 aa20.07■□□□□ 0.8
CPSF6-203ENST00000456847 TNFAIP1Q13829 316 aa20.07■□□□□ 0.8
CPSF6-203ENST00000456847 SPDYE2Q495Y8 402 aa20.07■□□□□ 0.8
CPSF6-203ENST00000456847 ARMC9Q7Z3E5 817 aa20.07■□□□□ 0.8
CPSF6-203ENST00000456847 ZNF70Q9UC06 446 aaPredicted RBP20.07■□□□□ 0.8
CPSF6-203ENST00000456847 SUGT1Q9Y2Z0 365 aa20.07■□□□□ 0.8
CPSF6-203ENST00000456847 FAM155AB1AL88 458 aaPredicted RBP20.06■□□□□ 0.8
CPSF6-203ENST00000456847 TIMM10P62072 90 aa20.06■□□□□ 0.8
CPSF6-203ENST00000456847 OS9Q13438 667 aaPredicted RBP20.06■□□□□ 0.8
CPSF6-203ENST00000456847 DENND2AQ9ULE3 1009 aa20.06■□□□□ 0.8
CPSF6-203ENST00000456847 HSPA8P11142 646 aaKnown RBP20.06■□□□□ 0.8
CPSF6-203ENST00000456847 LBX1P52954 281 aa20.06■□□□□ 0.8
CPSF6-203ENST00000456847 HDLBPQ00341 1268 aaKnown RBP20.06■□□□□ 0.8
CPSF6-203ENST00000456847 CCDC102BQ68D86 513 aa20.06■□□□□ 0.8
CPSF6-203ENST00000456847 RASAL3Q86YV0 1011 aa20.06■□□□□ 0.8
CPSF6-203ENST00000456847 NEUROD6Q96NK8 337 aa20.06■□□□□ 0.8
CPSF6-203ENST00000456847 RCAN3Q9UKA8 241 aa20.06■□□□□ 0.8
CPSF6-203ENST00000456847 PCNTO95613 3336 aa20.05■□□□□ 0.8
CPSF6-203ENST00000456847 SEMA3EO15041 775 aa20.05■□□□□ 0.8
CPSF6-203ENST00000456847 ZBTB7BO15156 539 aaPredicted RBP20.05■□□□□ 0.8
CPSF6-203ENST00000456847 ZIC5Q96T25 663 aa20.05■□□□□ 0.8
CPSF6-203ENST00000456847 ANGEL1Q9UNK9 670 aaKnown RBP20.05■□□□□ 0.8
CPSF6-203ENST00000456847 ATP8B2P98198 1209 aa20.04■□□□□ 0.8
CPSF6-203ENST00000456847 RASA3Q14644 834 aa20.04■□□□□ 0.8
CPSF6-203ENST00000456847 MVPQ14764 893 aaKnown RBP20.04■□□□□ 0.8
CPSF6-203ENST00000456847 TNS4Q8IZW8 715 aa20.04■□□□□ 0.8
CPSF6-203ENST00000456847 XAGE2Q96GT9 111 aa20.04■□□□□ 0.8
CPSF6-203ENST00000456847 PRDM10Q9NQV6 1147 aa20.04■□□□□ 0.8
CPSF6-203ENST00000456847 AKAP11Q9UKA4 1901 aa20.04■□□□□ 0.8
CPSF6-203ENST00000456847 TCP10L2B9ZVM9 353 aa20.04■□□□□ 0.8
CPSF6-203ENST00000456847 TNNI2P48788 182 aa20.04■□□□□ 0.8
CPSF6-203ENST00000456847 KIF23Q02241 960 aaPredicted RBP20.04■□□□□ 0.8
CPSF6-203ENST00000456847 POLA2Q14181 598 aa20.04■□□□□ 0.8
CPSF6-203ENST00000456847 SUPT20HL1Q3ZLR7 823 aa20.04■□□□□ 0.8
CPSF6-203ENST00000456847 GORABQ5T7V8 394 aa20.04■□□□□ 0.8
CPSF6-203ENST00000456847 TMOD2Q9NZR1 351 aa20.04■□□□□ 0.8
CPSF6-203ENST00000456847 SSC5DA1L4H1 1573 aa20.03■□□□□ 0.8
CPSF6-203ENST00000456847 LDHBP07195 334 aaKnown RBP20.03■□□□□ 0.8
CPSF6-203ENST00000456847 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.03■□□□□ 0.8
CPSF6-203ENST00000456847 TSKSQ9UJT2 592 aa20.03■□□□□ 0.8
CPSF6-203ENST00000456847 CA12O43570 354 aa20.02■□□□□ 0.8
CPSF6-203ENST00000456847 SSH3Q8TE77 659 aa20.02■□□□□ 0.8
CPSF6-203ENST00000456847 ZDHHC15Q96MV8 337 aa20.02■□□□□ 0.8
CPSF6-203ENST00000456847 FZD1Q9UP38 647 aa20.02■□□□□ 0.8
CPSF6-203ENST00000456847 PPP1R12BO60237 982 aaPredicted RBP20.02■□□□□ 0.79
CPSF6-203ENST00000456847 SURF6O75683 361 aaKnown RBP20.02■□□□□ 0.79
CPSF6-203ENST00000456847 PRDX5P30044 214 aa20.02■□□□□ 0.79
CPSF6-203ENST00000456847 NBPF12Q5TAG4 269 aaPredicted RBP20.02■□□□□ 0.79
CPSF6-203ENST00000456847 IFFO2Q5TF58 517 aa20.02■□□□□ 0.79
CPSF6-203ENST00000456847 ZGPATQ8N5A5 531 aaKnown RBP20.02■□□□□ 0.79
CPSF6-203ENST00000456847 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.02■□□□□ 0.79
CPSF6-203ENST00000456847 HHIPL2Q6UWX4 724 aa20.01■□□□□ 0.79
CPSF6-203ENST00000456847 MRIQ9BWK5 157 aa20.01■□□□□ 0.79
CPSF6-203ENST00000456847 SALL1Q9NSC2 1324 aa20.01■□□□□ 0.79
CPSF6-203ENST00000456847 MYH2Q9UKX2 1941 aa20■□□□□ 0.79
CPSF6-203ENST00000456847 CACNB3P54284 484 aa20■□□□□ 0.79
CPSF6-203ENST00000456847 RASGRF1Q13972 1273 aa20■□□□□ 0.79
CPSF6-203ENST00000456847 OTOFQ9HC10 1997 aa19.99■□□□□ 0.79
CPSF6-203ENST00000456847 MKRN3Q13064 507 aaKnown RBP19.99■□□□□ 0.79
CPSF6-203ENST00000456847 DIXDC1Q155Q3 683 aa19.99■□□□□ 0.79
CPSF6-203ENST00000456847 CEP85Q6P2H3 762 aa19.99■□□□□ 0.79
CPSF6-203ENST00000456847 ABCF2Q9UG63 623 aa19.99■□□□□ 0.79
CPSF6-203ENST00000456847 COG6Q9Y2V7 657 aa19.99■□□□□ 0.79
CPSF6-203ENST00000456847 IREB2P48200 963 aaKnown RBP19.98■□□□□ 0.79
CPSF6-203ENST00000456847 APOBEC3HQ6NTF7 200 aaKnown RBP19.98■□□□□ 0.79
CPSF6-203ENST00000456847 DZIP1Q86YF9 867 aaKnown RBP19.98■□□□□ 0.79
CPSF6-203ENST00000456847 TMEM39BQ9GZU3 492 aa19.98■□□□□ 0.79
CPSF6-203ENST00000456847 DDX19BQ9UMR2 479 aa19.98■□□□□ 0.79
CPSF6-203ENST00000456847 DAGLAQ9Y4D2 1042 aa19.98■□□□□ 0.79
CPSF6-203ENST00000456847 PDS5AQ29RF7 1337 aaKnown RBP19.98■□□□□ 0.79
CPSF6-203ENST00000456847 REM2Q8IYK8 340 aaPredicted RBP19.98■□□□□ 0.79
CPSF6-203ENST00000456847 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.98■□□□□ 0.79
CPSF6-203ENST00000456847 ZBTB22O15209 634 aa19.97■□□□□ 0.79
CPSF6-203ENST00000456847 TNNI3KQ59H18 835 aa19.97■□□□□ 0.79
CPSF6-203ENST00000456847 LDLRAD1Q5T700 205 aa19.97■□□□□ 0.79
CPSF6-203ENST00000456847 FPGT-TNNI3KV9GXZ4 949 aa19.97■□□□□ 0.79
CPSF6-203ENST00000456847 AK9Q5TCS8 1911 aa19.96■□□□□ 0.79
CPSF6-203ENST00000456847 MAP3K11Q16584 847 aa19.96■□□□□ 0.79
CPSF6-203ENST00000456847 SPTY2D1Q68D10 685 aaPredicted RBP19.96■□□□□ 0.79
CPSF6-203ENST00000456847 CSRNP1Q96S65 589 aa19.96■□□□□ 0.79
CPSF6-203ENST00000456847 GPR108Q9NPR9 543 aa19.96■□□□□ 0.79
CPSF6-203ENST00000456847 UQCRFS1P1P0C7P4 283 aa19.96■□□□□ 0.79
CPSF6-203ENST00000456847 CDAN1Q8IWY9 1227 aa19.96■□□□□ 0.79
CPSF6-203ENST00000456847 SLC10A4Q96EP9 437 aa19.96■□□□□ 0.79
CPSF6-203ENST00000456847 TEPSINQ96N21 525 aa19.96■□□□□ 0.79
CPSF6-203ENST00000456847 NOP58Q9Y2X3 529 aaKnown RBP19.96■□□□□ 0.79
CPSF6-203ENST00000456847 ARID4AP29374 1257 aaPredicted RBP19.95■□□□□ 0.78
CPSF6-203ENST00000456847 TTC39AQ5SRH9 613 aa19.95■□□□□ 0.78
CPSF6-203ENST00000456847 CHMP4BQ9H444 224 aaKnown RBP19.95■□□□□ 0.78
CPSF6-203ENST00000456847 SAGE1Q9NXZ1 904 aa19.95■□□□□ 0.78
CPSF6-203ENST00000456847 HMG20BQ9P0W2 317 aa19.95■□□□□ 0.78
CPSF6-203ENST00000456847 USP2O75604 605 aaPredicted RBP19.94■□□□□ 0.78
CPSF6-203ENST00000456847 FKBP1CQ5VVH2 108 aa19.94■□□□□ 0.78
CPSF6-203ENST00000456847 ERICH6Q7L0X2 663 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms