RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 MAP3K7O43318 606 aa9.27□□□□□ -0.93
BRCC3-208ENST00000453705 FOXO3O43524 673 aa9.27□□□□□ -0.93
BRCC3-208ENST00000453705 SSR1P43307 286 aaKnown RBP9.27□□□□□ -0.93
BRCC3-208ENST00000453705 ERAP2Q6P179 960 aa9.27□□□□□ -0.93
BRCC3-208ENST00000453705 DAAM1Q9Y4D1 1078 aa9.27□□□□□ -0.93
BRCC3-208ENST00000453705 PPFIA3O75145 1194 aa9.26□□□□□ -0.93
BRCC3-208ENST00000453705 PRIM1P49642 420 aaKnown RBP9.26□□□□□ -0.93
BRCC3-208ENST00000453705 CLK1P49759 484 aaKnown RBP9.26□□□□□ -0.93
BRCC3-208ENST00000453705 SEC13P55735 322 aa9.26□□□□□ -0.93
BRCC3-208ENST00000453705 EAPPQ56P03 285 aaPredicted RBP9.26□□□□□ -0.93
BRCC3-208ENST00000453705 KSR2Q6VAB6 950 aa9.26□□□□□ -0.93
BRCC3-208ENST00000453705 ZBTB40Q9NUA8 1239 aa9.26□□□□□ -0.93
BRCC3-208ENST00000453705 LRP6O75581 1613 aa9.26□□□□□ -0.93
BRCC3-208ENST00000453705 CICQ96RK0 1608 aaPredicted RBP9.26□□□□□ -0.93
BRCC3-208ENST00000453705 COL14A1Q05707 1796 aaKnown RBP9.26□□□□□ -0.93
BRCC3-208ENST00000453705 RACK1P63244 317 aaKnown RBP9.26□□□□□ -0.93
BRCC3-208ENST00000453705 WASHC5Q12768 1159 aa9.26□□□□□ -0.93
BRCC3-208ENST00000453705 MTHFSDQ2M296 383 aaKnown RBP9.26□□□□□ -0.93
BRCC3-208ENST00000453705 AMOTQ4VCS5 1084 aa9.26□□□□□ -0.93
BRCC3-208ENST00000453705 CRTC2Q53ET0 693 aaPredicted RBP9.26□□□□□ -0.93
BRCC3-208ENST00000453705 BRINP3Q76B58 766 aa9.26□□□□□ -0.93
BRCC3-208ENST00000453705 PPM1EQ8WY54 764 aa9.26□□□□□ -0.93
BRCC3-208ENST00000453705 ASAP1Q9ULH1 1129 aa9.26□□□□□ -0.93
BRCC3-208ENST00000453705 PIK3CDO00329 1044 aa9.25□□□□□ -0.93
BRCC3-208ENST00000453705 ENPP3O14638 875 aa9.25□□□□□ -0.93
BRCC3-208ENST00000453705 ECEL1O95672 775 aa9.25□□□□□ -0.93
BRCC3-208ENST00000453705 ATICP31939 592 aa9.25□□□□□ -0.93
BRCC3-208ENST00000453705 ANP32AP39687 249 aaKnown RBP9.25□□□□□ -0.93
BRCC3-208ENST00000453705 HIC1Q14526 733 aa9.25□□□□□ -0.93
BRCC3-208ENST00000453705 SEPT2Q15019 361 aa9.25□□□□□ -0.93
BRCC3-208ENST00000453705 PDIA6Q15084 440 aa9.25□□□□□ -0.93
BRCC3-208ENST00000453705 TWISTNBQ3B726 338 aaPredicted RBP9.25□□□□□ -0.93
BRCC3-208ENST00000453705 BRDTQ58F21 947 aaPredicted RBP9.25□□□□□ -0.93
BRCC3-208ENST00000453705 INTS3Q68E01 1043 aaKnown RBP9.25□□□□□ -0.93
BRCC3-208ENST00000453705 SLC4A10Q6U841 1118 aa9.25□□□□□ -0.93
BRCC3-208ENST00000453705 SETDB2Q96T68 719 aa9.25□□□□□ -0.93
BRCC3-208ENST00000453705 RWDD1Q9H446 243 aaPredicted RBP9.25□□□□□ -0.93
BRCC3-208ENST00000453705 FANCLQ9NW38 375 aa9.25□□□□□ -0.93
BRCC3-208ENST00000453705 SOS2Q07890 1332 aaPredicted RBP9.25□□□□□ -0.93
BRCC3-208ENST00000453705 SPATA31A3Q5VYP0 1347 aa9.25□□□□□ -0.93
BRCC3-208ENST00000453705 ROBO1Q9Y6N7 1651 aa9.25□□□□□ -0.93
BRCC3-208ENST00000453705 GNAT3A8MTJ3 354 aa9.25□□□□□ -0.93
BRCC3-208ENST00000453705 TSPAN6O43657 245 aa9.25□□□□□ -0.93
BRCC3-208ENST00000453705 SCGB1D2O95969 90 aa9.25□□□□□ -0.93
BRCC3-208ENST00000453705 GCP02774 474 aa9.25□□□□□ -0.93
BRCC3-208ENST00000453705 KRT18P05783 430 aaKnown RBP9.25□□□□□ -0.93
BRCC3-208ENST00000453705 PDE4AP27815 886 aa9.25□□□□□ -0.93
BRCC3-208ENST00000453705 GEMIN4P57678 1058 aaKnown RBP9.25□□□□□ -0.93
BRCC3-208ENST00000453705 CCSAPQ6IQ19 270 aaPredicted RBP9.25□□□□□ -0.93
BRCC3-208ENST00000453705 EP400NLQ6ZTU2 488 aa9.25□□□□□ -0.93
BRCC3-208ENST00000453705 PANK1Q8TE04 598 aa9.25□□□□□ -0.93
BRCC3-208ENST00000453705 GPCPD1Q9NPB8 672 aa9.25□□□□□ -0.93
BRCC3-208ENST00000453705 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.25□□□□□ -0.93
BRCC3-208ENST00000453705 PPP1R12AO14974 1030 aaPredicted RBP9.24□□□□□ -0.93
BRCC3-208ENST00000453705 PIP5K1CO60331 668 aa9.24□□□□□ -0.93
BRCC3-208ENST00000453705 LILRB3O75022 631 aa9.24□□□□□ -0.93
BRCC3-208ENST00000453705 RGS20O76081 388 aa9.24□□□□□ -0.93
BRCC3-208ENST00000453705 UVSSAQ2YD98 709 aa9.24□□□□□ -0.93
BRCC3-208ENST00000453705 MICALL1Q8N3F8 863 aa9.24□□□□□ -0.93
BRCC3-208ENST00000453705 TMEM87BQ96K49 555 aa9.24□□□□□ -0.93
BRCC3-208ENST00000453705 NLRP2Q9NX02 1062 aa9.24□□□□□ -0.93
BRCC3-208ENST00000453705 TMEM63CQ9P1W3 806 aa9.24□□□□□ -0.93
BRCC3-208ENST00000453705 NOB1Q9ULX3 412 aaKnown RBP9.24□□□□□ -0.93
BRCC3-208ENST00000453705 COL6A1P12109 1028 aa9.24□□□□□ -0.93
BRCC3-208ENST00000453705 NAP1L1P55209 391 aaKnown RBP9.24□□□□□ -0.93
BRCC3-208ENST00000453705 E2F7Q96AV8 911 aa9.24□□□□□ -0.93
BRCC3-208ENST00000453705 MRFAP1L1Q96HT8 127 aa9.24□□□□□ -0.93
BRCC3-208ENST00000453705 POLG2Q9UHN1 485 aa9.24□□□□□ -0.93
BRCC3-208ENST00000453705 INPP5FQ9Y2H2 1132 aa9.24□□□□□ -0.93
BRCC3-208ENST00000453705 C5P01031 1676 aa9.23□□□□□ -0.93
BRCC3-208ENST00000453705 TRIM64CA6NLI5 447 aa9.23□□□□□ -0.93
BRCC3-208ENST00000453705 ARID5AQ03989 594 aa9.23□□□□□ -0.93
BRCC3-208ENST00000453705 ASB16Q96NS5 453 aa9.23□□□□□ -0.93
BRCC3-208ENST00000453705 TMEM238LA0A1B0GVL6 79 aa9.23□□□□□ -0.93
BRCC3-208ENST00000453705 A6NCN8 305 aa9.23□□□□□ -0.93
BRCC3-208ENST00000453705 ECM1Q16610 540 aa9.23□□□□□ -0.93
BRCC3-208ENST00000453705 GRAMD1BQ3KR37 738 aa9.23□□□□□ -0.93
BRCC3-208ENST00000453705 TMEM259Q4ZIN3 620 aa9.23□□□□□ -0.93
BRCC3-208ENST00000453705 AKAP4Q5JQC9 854 aa9.23□□□□□ -0.93
BRCC3-208ENST00000453705 CLASRPQ8N2M8 674 aaKnown RBP9.23□□□□□ -0.93
BRCC3-208ENST00000453705 PDGFDQ9GZP0 370 aaPredicted RBP9.23□□□□□ -0.93
BRCC3-208ENST00000453705 PCDHB15Q9Y5E8 787 aa9.23□□□□□ -0.93
BRCC3-208ENST00000453705 ATP10DQ9P241 1426 aa9.22□□□□□ -0.93
BRCC3-208ENST00000453705 SHTN1A0MZ66 631 aa9.22□□□□□ -0.93
BRCC3-208ENST00000453705 PRPF3O43395 683 aaKnown RBP9.22□□□□□ -0.93
BRCC3-208ENST00000453705 LGR5O75473 907 aa9.22□□□□□ -0.93
BRCC3-208ENST00000453705 SPECC1Q5M775 1068 aa9.22□□□□□ -0.93
BRCC3-208ENST00000453705 C16orf54Q6UWD8 224 aa9.22□□□□□ -0.93
BRCC3-208ENST00000453705 SLF2Q8IX21 1173 aa9.22□□□□□ -0.93
BRCC3-208ENST00000453705 DEPDC4Q8N2C3 294 aa9.22□□□□□ -0.93
BRCC3-208ENST00000453705 C8orf58Q8NAV2 365 aa9.22□□□□□ -0.93
BRCC3-208ENST00000453705 SNRNP27Q8WVK2 155 aaKnown RBP9.22□□□□□ -0.93
BRCC3-208ENST00000453705 ARMC5Q96C12 935 aa9.22□□□□□ -0.93
BRCC3-208ENST00000453705 HOMER2Q9NSB8 354 aa9.22□□□□□ -0.93
BRCC3-208ENST00000453705 ZBTB7BO15156 539 aaPredicted RBP9.22□□□□□ -0.93
BRCC3-208ENST00000453705 USP17L8P0C7I0 530 aa9.22□□□□□ -0.93
BRCC3-208ENST00000453705 ZKSCAN8Q15776 578 aaPredicted RBP9.22□□□□□ -0.93
BRCC3-208ENST00000453705 CDC37Q16543 378 aaPredicted RBP9.22□□□□□ -0.93
BRCC3-208ENST00000453705 NFE2Q16621 373 aaPredicted RBP9.22□□□□□ -0.93
BRCC3-208ENST00000453705 KRT77Q7Z794 578 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms