RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 CEP126Q9P2H0 1117 aa12.77□□□□□ -0.36
PKP4-206ENST00000452162 KLRK1P26718 216 aa12.77□□□□□ -0.37
PKP4-206ENST00000452162 TXNRD3Q86VQ6 643 aa12.77□□□□□ -0.37
PKP4-206ENST00000452162 ZNF784Q8NCA9 323 aaPredicted RBP12.77□□□□□ -0.37
PKP4-206ENST00000452162 UBE2Q2Q8WVN8 375 aa12.77□□□□□ -0.37
PKP4-206ENST00000452162 EYA3Q99504 573 aa12.77□□□□□ -0.37
PKP4-206ENST00000452162 LARP6Q9BRS8 491 aaKnown RBP12.77□□□□□ -0.37
PKP4-206ENST00000452162 ISY1Q9ULR0 285 aaKnown RBP12.77□□□□□ -0.37
PKP4-206ENST00000452162 TAF6LQ9Y6J9 622 aa12.77□□□□□ -0.37
PKP4-206ENST00000452162 ZNF804BA4D1E1 1349 aa12.76□□□□□ -0.37
PKP4-206ENST00000452162 ZC3H4Q9UPT8 1303 aaKnown RBP12.76□□□□□ -0.37
PKP4-206ENST00000452162 SCN9AQ15858 1988 aa12.76□□□□□ -0.37
PKP4-206ENST00000452162 FZD9O00144 591 aa12.76□□□□□ -0.37
PKP4-206ENST00000452162 GOLIM4O00461 696 aa12.76□□□□□ -0.37
PKP4-206ENST00000452162 PSMA5P28066 241 aa12.76□□□□□ -0.37
PKP4-206ENST00000452162 DOK7Q18PE1 504 aa12.76□□□□□ -0.37
PKP4-206ENST00000452162 MCMDC2Q4G0Z9 681 aa12.76□□□□□ -0.37
PKP4-206ENST00000452162 NIM1KQ8IY84 436 aa12.76□□□□□ -0.37
PKP4-206ENST00000452162 ZSCAN31Q96LW9 406 aaPredicted RBP12.76□□□□□ -0.37
PKP4-206ENST00000452162 SEC62Q99442 399 aaKnown RBP12.76□□□□□ -0.37
PKP4-206ENST00000452162 ZC3H12CQ9C0D7 883 aaKnown RBP12.76□□□□□ -0.37
PKP4-206ENST00000452162 DBNDD1Q9H9R9 158 aa12.76□□□□□ -0.37
PKP4-206ENST00000452162 SH2B1Q9NRF2 756 aaPredicted RBP12.76□□□□□ -0.37
PKP4-206ENST00000452162 LEMD3Q9Y2U8 911 aa12.76□□□□□ -0.37
PKP4-206ENST00000452162 DDX49Q9Y6V7 483 aaKnown RBP12.76□□□□□ -0.37
PKP4-206ENST00000452162 ZNF541Q9H0D2 1346 aa12.76□□□□□ -0.37
PKP4-206ENST00000452162 COL9A3Q14050 684 aaPredicted RBP12.76□□□□□ -0.37
PKP4-206ENST00000452162 CCDC129Q6ZRS4 1044 aa12.76□□□□□ -0.37
PKP4-206ENST00000452162 CHAMP1Q96JM3 812 aa12.76□□□□□ -0.37
PKP4-206ENST00000452162 ALDH8A1Q9H2A2 487 aaPredicted RBP12.76□□□□□ -0.37
PKP4-206ENST00000452162 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.76□□□□□ -0.37
PKP4-206ENST00000452162 MROH5Q6ZUA9 1318 aa12.75□□□□□ -0.37
PKP4-206ENST00000452162 YDJCA8MPS7 323 aa12.75□□□□□ -0.37
PKP4-206ENST00000452162 IFIT1P09914 478 aaKnown RBP12.75□□□□□ -0.37
PKP4-206ENST00000452162 ST3GAL1Q11201 340 aa12.75□□□□□ -0.37
PKP4-206ENST00000452162 METTL24Q5JXM2 366 aa12.75□□□□□ -0.37
PKP4-206ENST00000452162 FOXD4L5Q5VV16 416 aaPredicted RBP12.75□□□□□ -0.37
PKP4-206ENST00000452162 VGLL2Q8N8G2 317 aa12.75□□□□□ -0.37
PKP4-206ENST00000452162 FOXD4L4Q8WXT5 416 aaPredicted RBP12.75□□□□□ -0.37
PKP4-206ENST00000452162 AKAP2Q9Y2D5 859 aa12.75□□□□□ -0.37
PKP4-206ENST00000452162 WDR33Q9C0J8 1336 aaKnown RBP12.75□□□□□ -0.37
PKP4-206ENST00000452162 XRCC6P12956 609 aaKnown RBP eCLIP12.74□□□□□ -0.37
PKP4-206ENST00000452162 RPS6KB1P23443 525 aa12.74□□□□□ -0.37
PKP4-206ENST00000452162 ADORA1P30542 326 aa12.74□□□□□ -0.37
PKP4-206ENST00000452162 HELLSQ9NRZ9 838 aa12.74□□□□□ -0.37
PKP4-206ENST00000452162 U3KPZ7 1027 aaPredicted RBP12.74□□□□□ -0.37
PKP4-206ENST00000452162 GLTPD2A6NH11 291 aa12.74□□□□□ -0.37
PKP4-206ENST00000452162 DDNO94850 711 aaPredicted RBP12.74□□□□□ -0.37
PKP4-206ENST00000452162 ZMYM1Q5SVZ6 1142 aa12.74□□□□□ -0.37
PKP4-206ENST00000452162 BLOC1S2Q6QNY1 142 aa12.74□□□□□ -0.37
PKP4-206ENST00000452162 KCNQ5Q9NR82 932 aa12.74□□□□□ -0.37
PKP4-206ENST00000452162 ZNRF3Q9ULT6 936 aa12.74□□□□□ -0.37
PKP4-206ENST00000452162 ECE2O60344 883 aa12.73□□□□□ -0.37
PKP4-206ENST00000452162 PRPF40AO75400 957 aaKnown RBP12.73□□□□□ -0.37
PKP4-206ENST00000452162 PDE8BO95263 885 aa12.73□□□□□ -0.37
PKP4-206ENST00000452162 MRE11P49959 708 aa12.73□□□□□ -0.37
PKP4-206ENST00000452162 ME3Q16798 604 aa12.73□□□□□ -0.37
PKP4-206ENST00000452162 XAGE2Q96GT9 111 aa12.73□□□□□ -0.37
PKP4-206ENST00000452162 TPCN1Q9ULQ1 816 aa12.73□□□□□ -0.37
PKP4-206ENST00000452162 IRS2Q9Y4H2 1338 aa12.73□□□□□ -0.37
PKP4-206ENST00000452162 EIF6P56537 245 aaKnown RBP12.73□□□□□ -0.37
PKP4-206ENST00000452162 KRT32Q14532 448 aa12.73□□□□□ -0.37
PKP4-206ENST00000452162 DPY19L2Q6NUT2 758 aa12.73□□□□□ -0.37
PKP4-206ENST00000452162 GAS2L3Q86XJ1 694 aa12.73□□□□□ -0.37
PKP4-206ENST00000452162 CCDC83Q8IWF9 413 aa12.73□□□□□ -0.37
PKP4-206ENST00000452162 GPT2Q8TD30 523 aa12.73□□□□□ -0.37
PKP4-206ENST00000452162 SMC3Q9UQE7 1217 aa12.73□□□□□ -0.37
PKP4-206ENST00000452162 RAD17O75943 681 aa12.72□□□□□ -0.37
PKP4-206ENST00000452162 CXCL9Q07325 125 aa12.72□□□□□ -0.37
PKP4-206ENST00000452162 UBE4AQ14139 1066 aa12.72□□□□□ -0.37
PKP4-206ENST00000452162 SLFNL1Q499Z3 407 aa12.72□□□□□ -0.37
PKP4-206ENST00000452162 CCDC158Q5M9N0 1113 aa12.72□□□□□ -0.37
PKP4-206ENST00000452162 PSME4Q14997 1843 aa12.72□□□□□ -0.37
PKP4-206ENST00000452162 G3V3G9 751 aa12.72□□□□□ -0.37
PKP4-206ENST00000452162 RNF113AO15541 343 aaKnown RBP12.72□□□□□ -0.37
PKP4-206ENST00000452162 TOB2Q14106 344 aaPredicted RBP12.72□□□□□ -0.37
PKP4-206ENST00000452162 ANKRD1Q15327 319 aa12.72□□□□□ -0.37
PKP4-206ENST00000452162 TTC39AQ5SRH9 613 aa12.72□□□□□ -0.37
PKP4-206ENST00000452162 DCAF8Q5TAQ9 597 aa12.72□□□□□ -0.37
PKP4-206ENST00000452162 GRPEL1Q9HAV7 217 aa12.72□□□□□ -0.37
PKP4-206ENST00000452162 GPBP1L1Q9HC44 474 aaPredicted RBP12.72□□□□□ -0.37
PKP4-206ENST00000452162 NMRK2Q9NPI5 230 aa12.72□□□□□ -0.37
PKP4-206ENST00000452162 GJA3Q9Y6H8 435 aa12.72□□□□□ -0.37
PKP4-206ENST00000452162 MAST3O60307 1309 aa12.71□□□□□ -0.37
PKP4-206ENST00000452162 CYP21A2P08686 494 aa12.71□□□□□ -0.37
PKP4-206ENST00000452162 SYT1P21579 422 aa12.71□□□□□ -0.37
PKP4-206ENST00000452162 DSCC1Q9BVC3 393 aa12.71□□□□□ -0.37
PKP4-206ENST00000452162 STX6O43752 255 aa12.71□□□□□ -0.38
PKP4-206ENST00000452162 ZSCAN22P10073 491 aaPredicted RBP12.71□□□□□ -0.38
PKP4-206ENST00000452162 FGFR2P21802 821 aa12.71□□□□□ -0.38
PKP4-206ENST00000452162 SCARF1Q14162 830 aa12.71□□□□□ -0.38
PKP4-206ENST00000452162 ATP2B3Q16720 1220 aa12.71□□□□□ -0.38
PKP4-206ENST00000452162 C15orf52Q6ZUT6 534 aaKnown RBP12.71□□□□□ -0.38
PKP4-206ENST00000452162 WDR90Q96KV7 1748 aa12.71□□□□□ -0.38
PKP4-206ENST00000452162 GJB2P29033 226 aa12.7□□□□□ -0.38
PKP4-206ENST00000452162 GYG1P46976 350 aa12.7□□□□□ -0.38
PKP4-206ENST00000452162 PUM3Q15397 648 aaKnown RBP12.7□□□□□ -0.38
PKP4-206ENST00000452162 GORABQ5T7V8 394 aa12.7□□□□□ -0.38
PKP4-206ENST00000452162 CIAPIN1Q6FI81 312 aa12.7□□□□□ -0.38
PKP4-206ENST00000452162 CAVIN1Q6NZI2 390 aaKnown RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms