RNA–Protein interactions for RNA: ENST00000450940.5

USP40-207, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-207ENST00000450940 DZIP1LQ8IYY4 767 aaKnown RBP24.14■■□□□ 1.45
USP40-207ENST00000450940 CSRNP1Q96S65 589 aa24.14■■□□□ 1.45
USP40-207ENST00000450940 TTLL12Q14166 644 aaPredicted RBP24.13■■□□□ 1.45
USP40-207ENST00000450940 MAP3K11Q16584 847 aa24.13■■□□□ 1.45
USP40-207ENST00000450940 ARMC9Q7Z3E5 817 aa24.13■■□□□ 1.45
USP40-207ENST00000450940 CLUAP1Q96AJ1 413 aa24.13■■□□□ 1.45
USP40-207ENST00000450940 SAGE1Q9NXZ1 904 aa24.13■■□□□ 1.45
USP40-207ENST00000450940 ZNF70Q9UC06 446 aaPredicted RBP24.13■■□□□ 1.45
USP40-207ENST00000450940 SSC5DA1L4H1 1573 aa24.12■■□□□ 1.45
USP40-207ENST00000450940 SRGAP3O43295 1099 aa24.12■■□□□ 1.45
USP40-207ENST00000450940 GNAI2P04899 355 aa24.12■■□□□ 1.45
USP40-207ENST00000450940 TSKSQ9UJT2 592 aa24.12■■□□□ 1.45
USP40-207ENST00000450940 SUPT20HL1Q3ZLR7 823 aa24.11■■□□□ 1.45
USP40-207ENST00000450940 TMEM57Q8N5G2 664 aa24.11■■□□□ 1.45
USP40-207ENST00000450940 WDR66Q8TBY9 1149 aa24.11■■□□□ 1.45
USP40-207ENST00000450940 TDRD3Q9H7E2 651 aaKnown RBP24.11■■□□□ 1.45
USP40-207ENST00000450940 VEZTQ9HBM0 779 aa24.11■■□□□ 1.45
USP40-207ENST00000450940 CASP8AP2Q9UKL3 1982 aa24.11■■□□□ 1.45
USP40-207ENST00000450940 UNCXA6NJT0 531 aa24.1■■□□□ 1.45
USP40-207ENST00000450940 TNFAIP1Q13829 316 aa24.1■■□□□ 1.45
USP40-207ENST00000450940 RASA3Q14644 834 aa24.1■■□□□ 1.45
USP40-207ENST00000450940 TEKT1Q969V4 418 aa24.09■■□□□ 1.45
USP40-207ENST00000450940 ZDHHC15Q96MV8 337 aa24.09■■□□□ 1.45
USP40-207ENST00000450940 RNF186Q9NXI6 227 aa24.09■■□□□ 1.45
USP40-207ENST00000450940 ANGEL1Q9UNK9 670 aaKnown RBP24.09■■□□□ 1.45
USP40-207ENST00000450940 MAST3O60307 1309 aa24.09■■□□□ 1.45
USP40-207ENST00000450940 SEMA3EO15041 775 aa24.08■■□□□ 1.45
USP40-207ENST00000450940 PPP1R12BO60237 982 aaPredicted RBP24.08■■□□□ 1.45
USP40-207ENST00000450940 PRKG1Q13976 671 aa24.08■■□□□ 1.45
USP40-207ENST00000450940 NBPF12Q5TAG4 269 aaPredicted RBP24.08■■□□□ 1.45
USP40-207ENST00000450940 HHIPL2Q6UWX4 724 aa24.08■■□□□ 1.45
USP40-207ENST00000450940 GNL3LQ9NVN8 582 aaKnown RBP24.08■■□□□ 1.45
USP40-207ENST00000450940 LAMB1P07942 1786 aa24.06■■□□□ 1.44
USP40-207ENST00000450940 PHKA1P46020 1223 aa24.06■■□□□ 1.44
USP40-207ENST00000450940 TM4SF4P48230 202 aa24.06■■□□□ 1.44
USP40-207ENST00000450940 APOBEC3HQ6NTF7 200 aaKnown RBP24.06■■□□□ 1.44
USP40-207ENST00000450940 TEPSINQ96N21 525 aa24.06■■□□□ 1.44
USP40-207ENST00000450940 FZD1Q9UP38 647 aa24.06■■□□□ 1.44
USP40-207ENST00000450940 SALL1Q9NSC2 1324 aa24.06■■□□□ 1.44
USP40-207ENST00000450940 PNMA6EA0A0J9YXQ4 647 aa24.05■■□□□ 1.44
USP40-207ENST00000450940 USP2O75604 605 aaPredicted RBP24.05■■□□□ 1.44
USP40-207ENST00000450940 TRPA1O75762 1119 aa24.05■■□□□ 1.44
USP40-207ENST00000450940 ADORA1P30542 326 aa24.05■■□□□ 1.44
USP40-207ENST00000450940 TIMM10P62072 90 aa24.05■■□□□ 1.44
USP40-207ENST00000450940 DENND2AQ9ULE3 1009 aa24.05■■□□□ 1.44
USP40-207ENST00000450940 AKAP2Q9Y2D5 859 aa24.05■■□□□ 1.44
USP40-207ENST00000450940 TNNI2P48788 182 aa24.04■■□□□ 1.44
USP40-207ENST00000450940 TFCP2Q12800 502 aa24.04■■□□□ 1.44
USP40-207ENST00000450940 FKBP1CQ5VVH2 108 aa24.04■■□□□ 1.44
USP40-207ENST00000450940 SPRYD7Q5W111 196 aa24.04■■□□□ 1.44
USP40-207ENST00000450940 CCDC102BQ68D86 513 aa24.04■■□□□ 1.44
USP40-207ENST00000450940 PDS5AQ29RF7 1337 aaKnown RBP24.04■■□□□ 1.44
USP40-207ENST00000450940 RLBP1P12271 317 aa24.03■■□□□ 1.44
USP40-207ENST00000450940 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.03■■□□□ 1.44
USP40-207ENST00000450940 A0A1B0GUL7 405 aa24.02■■□□□ 1.44
USP40-207ENST00000450940 TCP10L2B9ZVM9 353 aa24.02■■□□□ 1.44
USP40-207ENST00000450940 ZBTB7BO15156 539 aaPredicted RBP24.02■■□□□ 1.44
USP40-207ENST00000450940 IREB2P48200 963 aaKnown RBP24.02■■□□□ 1.44
USP40-207ENST00000450940 POLA2Q14181 598 aa24.02■■□□□ 1.44
USP40-207ENST00000450940 FAM83AQ86UY5 434 aa24.02■■□□□ 1.44
USP40-207ENST00000450940 SLC10A4Q96EP9 437 aa24.02■■□□□ 1.44
USP40-207ENST00000450940 OTOFQ9HC10 1997 aa24.02■■□□□ 1.43
USP40-207ENST00000450940 ATP8B2P98198 1209 aa24.01■■□□□ 1.43
USP40-207ENST00000450940 FTSJ3Q8IY81 847 aaKnown RBP24.01■■□□□ 1.43
USP40-207ENST00000450940 SSH3Q8TE77 659 aa24.01■■□□□ 1.43
USP40-207ENST00000450940 XAGE2Q96GT9 111 aa24.01■■□□□ 1.43
USP40-207ENST00000450940 CLMNQ96JQ2 1002 aa24.01■■□□□ 1.43
USP40-207ENST00000450940 TMEM39BQ9GZU3 492 aa24.01■■□□□ 1.43
USP40-207ENST00000450940 CAPN15O75808 1086 aa24■■□□□ 1.43
USP40-207ENST00000450940 LDHBP07195 334 aaKnown RBP24■■□□□ 1.43
USP40-207ENST00000450940 PRDX5P30044 214 aa24■■□□□ 1.43
USP40-207ENST00000450940 CDAN1Q8IWY9 1227 aa24■■□□□ 1.43
USP40-207ENST00000450940 ZBTB48P10074 688 aaPredicted RBP23.99■■□□□ 1.43
USP40-207ENST00000450940 SREBF2Q12772 1141 aa23.99■■□□□ 1.43
USP40-207ENST00000450940 G3BP1Q13283 466 aaKnown RBP eCLIP23.99■■□□□ 1.43
USP40-207ENST00000450940 RASGRF1Q13972 1273 aa23.99■■□□□ 1.43
USP40-207ENST00000450940 MVPQ14764 893 aaKnown RBP23.99■■□□□ 1.43
USP40-207ENST00000450940 ANKRD13AQ8IZ07 590 aa23.99■■□□□ 1.43
USP40-207ENST00000450940 TMOD2Q9NZR1 351 aa23.99■■□□□ 1.43
USP40-207ENST00000450940 DAGLAQ9Y4D2 1042 aa23.99■■□□□ 1.43
USP40-207ENST00000450940 MYH2Q9UKX2 1941 aa23.98■■□□□ 1.43
USP40-207ENST00000450940 CACNB3P54284 484 aa23.98■■□□□ 1.43
USP40-207ENST00000450940 INHBEP58166 350 aa23.98■■□□□ 1.43
USP40-207ENST00000450940 ZGPATQ8N5A5 531 aaKnown RBP23.98■■□□□ 1.43
USP40-207ENST00000450940 ABHD8Q96I13 439 aa23.98■■□□□ 1.43
USP40-207ENST00000450940 WNK4Q96J92 1243 aa23.98■■□□□ 1.43
USP40-207ENST00000450940 MKRN3Q13064 507 aaKnown RBP23.97■■□□□ 1.43
USP40-207ENST00000450940 DIXDC1Q155Q3 683 aa23.97■■□□□ 1.43
USP40-207ENST00000450940 ITPRIPQ8IWB1 547 aa23.97■■□□□ 1.43
USP40-207ENST00000450940 CFHR5Q9BXR6 569 aa23.97■■□□□ 1.43
USP40-207ENST00000450940 RPAP1Q9BWH6 1393 aaPredicted RBP23.96■■□□□ 1.43
USP40-207ENST00000450940 MANSC4A6NHS7 340 aaPredicted RBP23.96■■□□□ 1.43
USP40-207ENST00000450940 NOM1Q5C9Z4 860 aaKnown RBP23.96■■□□□ 1.43
USP40-207ENST00000450940 NEUROD6Q96NK8 337 aa23.96■■□□□ 1.43
USP40-207ENST00000450940 GPR108Q9NPR9 543 aa23.96■■□□□ 1.43
USP40-207ENST00000450940 CDC42EP5Q6NZY7 148 aa23.95■■□□□ 1.42
USP40-207ENST00000450940 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.95■■□□□ 1.42
USP40-207ENST00000450940 NOP58Q9Y2X3 529 aaKnown RBP23.95■■□□□ 1.42
USP40-207ENST00000450940 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.94■■□□□ 1.42
USP40-207ENST00000450940 FAM151AQ8WW52 585 aa23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms