RNA–Protein interactions for RNA: ENST00000449544.5

HCG18-238, Transcript of HLA complex group 18, humanhuman

TSL 2 BASIC

Gene HCG18, Length 4,262 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-238ENST00000449544 HAND2P61296 217 aa9.96□□□□□ -0.81
HCG18-238ENST00000449544 RASA3Q14644 834 aa9.96□□□□□ -0.81
HCG18-238ENST00000449544 KCTD2Q14681 263 aa9.96□□□□□ -0.81
HCG18-238ENST00000449544 USP50Q70EL3 339 aaPredicted RBP9.96□□□□□ -0.81
HCG18-238ENST00000449544 PROM2Q8N271 834 aa9.96□□□□□ -0.81
HCG18-238ENST00000449544 PAG1Q9NWQ8 432 aa9.96□□□□□ -0.81
HCG18-238ENST00000449544 IFIT3O14879 490 aaKnown RBP9.96□□□□□ -0.82
HCG18-238ENST00000449544 ST18O60284 1047 aa9.96□□□□□ -0.82
HCG18-238ENST00000449544 CRKP46108 304 aa9.96□□□□□ -0.82
HCG18-238ENST00000449544 STRIP1Q5VSL9 837 aa9.96□□□□□ -0.82
HCG18-238ENST00000449544 OLFM4Q6UX06 510 aa9.96□□□□□ -0.82
HCG18-238ENST00000449544 DPF3Q92784 378 aa9.96□□□□□ -0.82
HCG18-238ENST00000449544 PLEKHG2Q9H7P9 1386 aa9.96□□□□□ -0.82
HCG18-238ENST00000449544 MBD4O95243 580 aa9.96□□□□□ -0.82
HCG18-238ENST00000449544 FOSBP53539 338 aa9.96□□□□□ -0.82
HCG18-238ENST00000449544 KIAA2012Q0VF49 1180 aa9.96□□□□□ -0.82
HCG18-238ENST00000449544 LRRC24Q50LG9 513 aa9.96□□□□□ -0.82
HCG18-238ENST00000449544 CCDC82Q8N4S0 544 aa9.96□□□□□ -0.82
HCG18-238ENST00000449544 MYOZ2Q9NPC6 264 aa9.96□□□□□ -0.82
HCG18-238ENST00000449544 KDRP35968 1356 aa9.95□□□□□ -0.82
HCG18-238ENST00000449544 SEMA3EO15041 775 aa9.95□□□□□ -0.82
HCG18-238ENST00000449544 ALDH1A1P00352 501 aa9.95□□□□□ -0.82
HCG18-238ENST00000449544 GNAT2P19087 354 aa9.95□□□□□ -0.82
HCG18-238ENST00000449544 CERKLQ49MI3 558 aaPredicted RBP9.95□□□□□ -0.82
HCG18-238ENST00000449544 CATIPQ7Z7H3 387 aa9.95□□□□□ -0.82
HCG18-238ENST00000449544 AGBL3Q8NEM8 1001 aa9.95□□□□□ -0.82
HCG18-238ENST00000449544 DBNDD2Q9BQY9 259 aa9.95□□□□□ -0.82
HCG18-238ENST00000449544 PUS3Q9BZE2 481 aaKnown RBP9.95□□□□□ -0.82
HCG18-238ENST00000449544 FLOT1O75955 427 aa9.95□□□□□ -0.82
HCG18-238ENST00000449544 CCDC178Q5BJE1 867 aa9.95□□□□□ -0.82
HCG18-238ENST00000449544 CCDC102BQ68D86 513 aa9.95□□□□□ -0.82
HCG18-238ENST00000449544 CENPQQ7L2Z9 268 aaPredicted RBP9.95□□□□□ -0.82
HCG18-238ENST00000449544 ZNF34Q8IZ26 560 aa9.95□□□□□ -0.82
HCG18-238ENST00000449544 ESR2Q92731 530 aa9.95□□□□□ -0.82
HCG18-238ENST00000449544 HOMER2Q9NSB8 354 aa9.95□□□□□ -0.82
HCG18-238ENST00000449544 CNPY2Q9Y2B0 182 aa9.95□□□□□ -0.82
HCG18-238ENST00000449544 QRICH2Q9H0J4 1663 aa9.95□□□□□ -0.82
HCG18-238ENST00000449544 SCAF8Q9UPN6 1271 aaKnown RBP9.95□□□□□ -0.82
HCG18-238ENST00000449544 CCL15-CCL14A0A0B4J2E2 113 aa9.94□□□□□ -0.82
HCG18-238ENST00000449544 CCL15Q16663 113 aa9.94□□□□□ -0.82
HCG18-238ENST00000449544 ANKRD13AQ8IZ07 590 aa9.94□□□□□ -0.82
HCG18-238ENST00000449544 LBHD1Q9BQE6 289 aaPredicted RBP9.94□□□□□ -0.82
HCG18-238ENST00000449544 RFX1P22670 979 aa9.94□□□□□ -0.82
HCG18-238ENST00000449544 SF3B3Q15393 1217 aaKnown RBP9.94□□□□□ -0.82
HCG18-238ENST00000449544 CKAP2LQ8IYA6 745 aa9.94□□□□□ -0.82
HCG18-238ENST00000449544 DEFB129Q9H1M3 183 aa9.94□□□□□ -0.82
HCG18-238ENST00000449544 GOPCQ9HD26 462 aa9.94□□□□□ -0.82
HCG18-238ENST00000449544 KCNH4Q9UQ05 1017 aa9.94□□□□□ -0.82
HCG18-238ENST00000449544 KIF5BP33176 963 aa9.94□□□□□ -0.82
HCG18-238ENST00000449544 DIXDC1Q155Q3 683 aa9.94□□□□□ -0.82
HCG18-238ENST00000449544 ANKRD35Q8N283 1001 aa9.94□□□□□ -0.82
HCG18-238ENST00000449544 C1QTNF8P60827 252 aa9.93□□□□□ -0.82
HCG18-238ENST00000449544 ZNF142P52746 1687 aaPredicted RBP9.93□□□□□ -0.82
HCG18-238ENST00000449544 SLC1A4P43007 532 aa9.93□□□□□ -0.82
HCG18-238ENST00000449544 USP14P54578 494 aa9.93□□□□□ -0.82
HCG18-238ENST00000449544 FASTKD5Q7L8L6 764 aaKnown RBP9.93□□□□□ -0.82
HCG18-238ENST00000449544 ISCA1Q9BUE6 129 aa9.93□□□□□ -0.82
HCG18-238ENST00000449544 EFCC1Q9HA90 598 aa9.93□□□□□ -0.82
HCG18-238ENST00000449544 FBXO3Q9UK99 471 aa9.93□□□□□ -0.82
HCG18-238ENST00000449544 SAMM50Q9Y512 469 aa9.93□□□□□ -0.82
HCG18-238ENST00000449544 SNAP23O00161 211 aa9.93□□□□□ -0.82
HCG18-238ENST00000449544 TRIM28Q13263 835 aaKnown RBP9.93□□□□□ -0.82
HCG18-238ENST00000449544 TNNI3KQ59H18 835 aa9.93□□□□□ -0.82
HCG18-238ENST00000449544 BEND3Q5T5X7 828 aa9.93□□□□□ -0.82
HCG18-238ENST00000449544 NOC3LQ8WTT2 800 aaKnown RBP9.93□□□□□ -0.82
HCG18-238ENST00000449544 EVI5LQ96CN4 794 aa9.93□□□□□ -0.82
HCG18-238ENST00000449544 TRIM17Q9Y577 477 aa9.93□□□□□ -0.82
HCG18-238ENST00000449544 FPGT-TNNI3KV9GXZ4 949 aa9.93□□□□□ -0.82
HCG18-238ENST00000449544 NTSR2O95665 410 aa9.93□□□□□ -0.82
HCG18-238ENST00000449544 SNAPC2Q13487 334 aa9.93□□□□□ -0.82
HCG18-238ENST00000449544 ABCB5Q2M3G0 1257 aa9.93□□□□□ -0.82
HCG18-238ENST00000449544 PPP4R3AQ6IN85 833 aa9.93□□□□□ -0.82
HCG18-238ENST00000449544 CAPNS2Q96L46 248 aa9.93□□□□□ -0.82
HCG18-238ENST00000449544 ADCY9O60503 1353 aa9.93□□□□□ -0.82
HCG18-238ENST00000449544 ADGRB1O14514 1584 aa9.93□□□□□ -0.82
HCG18-238ENST00000449544 PHKA1P46020 1223 aa9.92□□□□□ -0.82
HCG18-238ENST00000449544 PTPDC1A2A3K4 754 aa9.92□□□□□ -0.82
HCG18-238ENST00000449544 ASNSP08243 561 aa9.92□□□□□ -0.82
HCG18-238ENST00000449544 MAP3K9P80192 1104 aa9.92□□□□□ -0.82
HCG18-238ENST00000449544 CHST3Q7LGC8 479 aa9.92□□□□□ -0.82
HCG18-238ENST00000449544 CDK5RAP3Q96JB5 506 aa9.92□□□□□ -0.82
HCG18-238ENST00000449544 AHDC1Q5TGY3 1603 aaPredicted RBP9.92□□□□□ -0.82
HCG18-238ENST00000449544 CDC45O75419 566 aa9.92□□□□□ -0.82
HCG18-238ENST00000449544 L1TD1Q5T7N2 865 aaKnown RBP9.92□□□□□ -0.82
HCG18-238ENST00000449544 DHX36Q9H2U1 1008 aaKnown RBP9.92□□□□□ -0.82
HCG18-238ENST00000449544 ARMT1Q9H993 441 aa9.92□□□□□ -0.82
HCG18-238ENST00000449544 CCDC196A0A1B0GTZ2 297 aa9.91□□□□□ -0.82
HCG18-238ENST00000449544 CTCFP49711 727 aaPredicted RBP9.91□□□□□ -0.82
HCG18-238ENST00000449544 SP4Q02446 784 aa9.91□□□□□ -0.82
HCG18-238ENST00000449544 PLEKHF1Q96S99 279 aa9.91□□□□□ -0.82
HCG18-238ENST00000449544 PI4KBQ9UBF8 816 aa9.91□□□□□ -0.82
HCG18-238ENST00000449544 TSKSQ9UJT2 592 aa9.91□□□□□ -0.82
HCG18-238ENST00000449544 DGKZQ13574 1117 aa9.91□□□□□ -0.82
HCG18-238ENST00000449544 DHX37Q8IY37 1157 aaKnown RBP9.91□□□□□ -0.82
HCG18-238ENST00000449544 SMARCC2Q8TAQ2 1214 aa9.91□□□□□ -0.82
HCG18-238ENST00000449544 CHURC1Q8WUH1 139 aa9.91□□□□□ -0.82
HCG18-238ENST00000449544 KIFC2Q96AC6 838 aa9.91□□□□□ -0.82
HCG18-238ENST00000449544 KRT18P05783 430 aaKnown RBP9.91□□□□□ -0.82
HCG18-238ENST00000449544 CETPP11597 493 aa9.91□□□□□ -0.82
HCG18-238ENST00000449544 ZAP70P43403 619 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms