RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 SPATA32Q96LK8 384 aa15.56■□□□□ 0.08
SYNGAP1-204ENST00000449372 SNRKQ9NRH2 765 aa15.56■□□□□ 0.08
SYNGAP1-204ENST00000449372 CICQ96RK0 1608 aaPredicted RBP15.56■□□□□ 0.08
SYNGAP1-204ENST00000449372 PHLPP1O60346 1717 aa15.56■□□□□ 0.08
SYNGAP1-204ENST00000449372 DOT1LQ8TEK3 1739 aa15.56■□□□□ 0.08
SYNGAP1-204ENST00000449372 H3BQV1 296 aa15.56■□□□□ 0.08
SYNGAP1-204ENST00000449372 IFFO2Q5TF58 517 aa15.56■□□□□ 0.08
SYNGAP1-204ENST00000449372 HSP90AB3PQ58FF7 597 aa15.56■□□□□ 0.08
SYNGAP1-204ENST00000449372 TTC14Q96N46 770 aa15.56■□□□□ 0.08
SYNGAP1-204ENST00000449372 CEP89Q96ST8 783 aa15.56■□□□□ 0.08
SYNGAP1-204ENST00000449372 TLR7Q9NYK1 1049 aaKnown RBP15.56■□□□□ 0.08
SYNGAP1-204ENST00000449372 PIGBQ92521 554 aa15.55■□□□□ 0.08
SYNGAP1-204ENST00000449372 NAT10Q9H0A0 1025 aaKnown RBP15.55■□□□□ 0.08
SYNGAP1-204ENST00000449372 DNAJC25Q9H1X3 360 aa15.55■□□□□ 0.08
SYNGAP1-204ENST00000449372 BECN2A8MW95 431 aa15.55■□□□□ 0.08
SYNGAP1-204ENST00000449372 ATP5J2-PTCD1G3V325 749 aa15.55■□□□□ 0.08
SYNGAP1-204ENST00000449372 PTCD1O75127 700 aaKnown RBP15.55■□□□□ 0.08
SYNGAP1-204ENST00000449372 LIG1P18858 919 aa15.55■□□□□ 0.08
SYNGAP1-204ENST00000449372 RUFY3Q7L099 469 aa15.55■□□□□ 0.08
SYNGAP1-204ENST00000449372 RREB1Q92766 1687 aa15.55■□□□□ 0.08
SYNGAP1-204ENST00000449372 CORO7P57737 925 aa15.54■□□□□ 0.08
SYNGAP1-204ENST00000449372 GRIPAP1Q4V328 841 aa15.54■□□□□ 0.08
SYNGAP1-204ENST00000449372 PRPF40BQ6NWY9 871 aaKnown RBP15.54■□□□□ 0.08
SYNGAP1-204ENST00000449372 ZSCAN16Q9H4T2 348 aaPredicted RBP15.54■□□□□ 0.08
SYNGAP1-204ENST00000449372 ZSWIM6Q9HCJ5 1215 aa15.54■□□□□ 0.08
SYNGAP1-204ENST00000449372 ANKRD65E5RJM6 399 aa15.54■□□□□ 0.08
SYNGAP1-204ENST00000449372 FOXR1Q6PIV2 292 aa15.54■□□□□ 0.08
SYNGAP1-204ENST00000449372 UBE3BQ7Z3V4 1068 aa15.54■□□□□ 0.08
SYNGAP1-204ENST00000449372 TPM1P09493 284 aa15.54■□□□□ 0.08
SYNGAP1-204ENST00000449372 CC2D1AQ6P1N0 951 aaPredicted RBP15.54■□□□□ 0.08
SYNGAP1-204ENST00000449372 CCDC73Q6ZRK6 1079 aa15.54■□□□□ 0.08
SYNGAP1-204ENST00000449372 AACSQ86V21 672 aa15.54■□□□□ 0.08
SYNGAP1-204ENST00000449372 A0A087WZG4 1122 aa15.53■□□□□ 0.08
SYNGAP1-204ENST00000449372 GOLIM4O00461 696 aa15.53■□□□□ 0.08
SYNGAP1-204ENST00000449372 KCNB2Q92953 911 aa15.53■□□□□ 0.08
SYNGAP1-204ENST00000449372 KCND1Q9NSA2 647 aa15.53■□□□□ 0.08
SYNGAP1-204ENST00000449372 DACT1Q9NYF0 836 aa15.53■□□□□ 0.08
SYNGAP1-204ENST00000449372 MTMR6Q9Y217 621 aa15.53■□□□□ 0.08
SYNGAP1-204ENST00000449372 TUBB4AP04350 444 aa15.53■□□□□ 0.08
SYNGAP1-204ENST00000449372 MRFAP1L1Q96HT8 127 aa15.53■□□□□ 0.08
SYNGAP1-204ENST00000449372 NWD2Q9ULI1 1742 aa15.53■□□□□ 0.08
SYNGAP1-204ENST00000449372 ISCA1Q9BUE6 129 aa15.53■□□□□ 0.08
SYNGAP1-204ENST00000449372 ASAP1Q9ULH1 1129 aa15.53■□□□□ 0.08
SYNGAP1-204ENST00000449372 JCADQ9P266 1359 aa15.52■□□□□ 0.08
SYNGAP1-204ENST00000449372 ATL3Q6DD88 541 aa15.52■□□□□ 0.08
SYNGAP1-204ENST00000449372 SLC4A9Q96Q91 983 aa15.52■□□□□ 0.08
SYNGAP1-204ENST00000449372 CCDC158Q5M9N0 1113 aa15.52■□□□□ 0.08
SYNGAP1-204ENST00000449372 ZNF396Q96N95 335 aaPredicted RBP15.52■□□□□ 0.08
SYNGAP1-204ENST00000449372 ARFGAP3Q9NP61 516 aa15.52■□□□□ 0.08
SYNGAP1-204ENST00000449372 HOMER1Q86YM7 354 aa15.52■□□□□ 0.07
SYNGAP1-204ENST00000449372 TMOD3Q9NYL9 352 aa15.52■□□□□ 0.07
SYNGAP1-204ENST00000449372 CCDC196A0A1B0GTZ2 297 aa15.51■□□□□ 0.07
SYNGAP1-204ENST00000449372 CCP110O43303 1012 aa15.51■□□□□ 0.07
SYNGAP1-204ENST00000449372 PPP1R13BQ96KQ4 1090 aa15.51■□□□□ 0.07
SYNGAP1-204ENST00000449372 CCDC189A1A4V9 331 aa15.51■□□□□ 0.07
SYNGAP1-204ENST00000449372 LARP6Q9BRS8 491 aaKnown RBP15.51■□□□□ 0.07
SYNGAP1-204ENST00000449372 FSD1Q9BTV5 496 aa15.51■□□□□ 0.07
SYNGAP1-204ENST00000449372 CCDC8Q9H0W5 538 aaPredicted RBP15.51■□□□□ 0.07
SYNGAP1-204ENST00000449372 SIL1Q9H173 461 aa15.51■□□□□ 0.07
SYNGAP1-204ENST00000449372 EPC1Q9H2F5 836 aa15.51■□□□□ 0.07
SYNGAP1-204ENST00000449372 E4F1Q66K89 784 aaPredicted RBP15.5■□□□□ 0.07
SYNGAP1-204ENST00000449372 VPS18Q9P253 973 aa15.5■□□□□ 0.07
SYNGAP1-204ENST00000449372 NUP98P52948 1817 aa15.5■□□□□ 0.07
SYNGAP1-204ENST00000449372 EFCAB8A8MWE9 144 aa15.5■□□□□ 0.07
SYNGAP1-204ENST00000449372 TRIM28Q13263 835 aaKnown RBP15.5■□□□□ 0.07
SYNGAP1-204ENST00000449372 SARM1Q6SZW1 724 aa15.5■□□□□ 0.07
SYNGAP1-204ENST00000449372 ATG9AQ7Z3C6 839 aa15.5■□□□□ 0.07
SYNGAP1-204ENST00000449372 CCDC9Q9Y3X0 531 aaKnown RBP15.5■□□□□ 0.07
SYNGAP1-204ENST00000449372 TADA3O75528 432 aa15.5■□□□□ 0.07
SYNGAP1-204ENST00000449372 HMGB1P09429 215 aaKnown RBP15.5■□□□□ 0.07
SYNGAP1-204ENST00000449372 MNAT1P51948 309 aa15.5■□□□□ 0.07
SYNGAP1-204ENST00000449372 TTC6Q86TZ1 520 aa15.5■□□□□ 0.07
SYNGAP1-204ENST00000449372 RNF217Q8TC41 542 aa15.5■□□□□ 0.07
SYNGAP1-204ENST00000449372 ALDH8A1Q9H2A2 487 aaPredicted RBP15.5■□□□□ 0.07
SYNGAP1-204ENST00000449372 CWC25Q9NXE8 425 aaPredicted RBP15.5■□□□□ 0.07
SYNGAP1-204ENST00000449372 DBNLQ9UJU6 430 aaKnown RBP15.5■□□□□ 0.07
SYNGAP1-204ENST00000449372 H3BQF6 201 aa15.49■□□□□ 0.07
SYNGAP1-204ENST00000449372 EVCP57679 992 aa15.49■□□□□ 0.07
SYNGAP1-204ENST00000449372 GSDMDP57764 484 aa15.49■□□□□ 0.07
SYNGAP1-204ENST00000449372 TNNI3KQ59H18 835 aa15.49■□□□□ 0.07
SYNGAP1-204ENST00000449372 EFCAB13Q8IY85 973 aa15.49■□□□□ 0.07
SYNGAP1-204ENST00000449372 CARD6Q9BX69 1037 aa15.49■□□□□ 0.07
SYNGAP1-204ENST00000449372 CLSTN2Q9H4D0 955 aa15.49■□□□□ 0.07
SYNGAP1-204ENST00000449372 MKRN1Q9UHC7 482 aaKnown RBP15.49■□□□□ 0.07
SYNGAP1-204ENST00000449372 DNAI1Q9UI46 699 aa15.49■□□□□ 0.07
SYNGAP1-204ENST00000449372 RBM8AQ9Y5S9 174 aaKnown RBP15.49■□□□□ 0.07
SYNGAP1-204ENST00000449372 FPGT-TNNI3KV9GXZ4 949 aa15.49■□□□□ 0.07
SYNGAP1-204ENST00000449372 LRCH2Q5VUJ6 765 aa15.49■□□□□ 0.07
SYNGAP1-204ENST00000449372 TTLL5Q6EMB2 1281 aa15.49■□□□□ 0.07
SYNGAP1-204ENST00000449372 RASEFQ8IZ41 740 aa15.49■□□□□ 0.07
SYNGAP1-204ENST00000449372 CPP00450 1065 aa15.49■□□□□ 0.07
SYNGAP1-204ENST00000449372 MICALL1Q8N3F8 863 aa15.49■□□□□ 0.07
SYNGAP1-204ENST00000449372 SRRTQ9BXP5 876 aaKnown RBP15.49■□□□□ 0.07
SYNGAP1-204ENST00000449372 MED23Q9ULK4 1368 aa15.49■□□□□ 0.07
SYNGAP1-204ENST00000449372 KINO60870 393 aaKnown RBP15.49■□□□□ 0.07
SYNGAP1-204ENST00000449372 URI1O94763 535 aaPredicted RBP15.49■□□□□ 0.07
SYNGAP1-204ENST00000449372 TFCP2Q12800 502 aa15.49■□□□□ 0.07
SYNGAP1-204ENST00000449372 GNL2Q13823 731 aaKnown RBP15.49■□□□□ 0.07
SYNGAP1-204ENST00000449372 CREB3L3Q68CJ9 461 aa15.49■□□□□ 0.07
SYNGAP1-204ENST00000449372 PLCD4Q9BRC7 762 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms