RNA–Protein interactions for RNA: ENST00000448056.1

AC004540.1-206, humanhuman

TSL 3

Gene AC004540.1, Length 567 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-206ENST00000448056 STAP2Q9UGK3 403 aa9.23□□□□□ -0.93
AC004540.1-206ENST00000448056 IQSEC3Q9UPP2 1182 aaPredicted RBP9.23□□□□□ -0.93
AC004540.1-206ENST00000448056 USP17L3A6NCW0 530 aa9.22□□□□□ -0.93
AC004540.1-206ENST00000448056 USP17L4A6NCW7 530 aa9.22□□□□□ -0.93
AC004540.1-206ENST00000448056 SEMA3EO15041 775 aa9.22□□□□□ -0.93
AC004540.1-206ENST00000448056 RAD17O75943 681 aa9.22□□□□□ -0.93
AC004540.1-206ENST00000448056 ATP5JP18859 108 aa9.22□□□□□ -0.93
AC004540.1-206ENST00000448056 MX1P20591 662 aa9.22□□□□□ -0.93
AC004540.1-206ENST00000448056 GTF2IP78347 998 aa9.22□□□□□ -0.93
AC004540.1-206ENST00000448056 CXCL9Q07325 125 aa9.22□□□□□ -0.93
AC004540.1-206ENST00000448056 RASGRF1Q13972 1273 aa9.22□□□□□ -0.93
AC004540.1-206ENST00000448056 SCARF1Q14162 830 aa9.22□□□□□ -0.93
AC004540.1-206ENST00000448056 TTLL5Q6EMB2 1281 aa9.22□□□□□ -0.93
AC004540.1-206ENST00000448056 USP17L1Q7RTZ2 530 aa9.22□□□□□ -0.93
AC004540.1-206ENST00000448056 PLEKHM2Q8IWE5 1019 aa9.22□□□□□ -0.93
AC004540.1-206ENST00000448056 GPATCH3Q96I76 525 aa9.22□□□□□ -0.93
AC004540.1-206ENST00000448056 CRISPLD2Q9H0B8 497 aa9.22□□□□□ -0.93
AC004540.1-206ENST00000448056 DENND2AQ9ULE3 1009 aa9.22□□□□□ -0.93
AC004540.1-206ENST00000448056 SALL3Q9BXA9 1300 aa9.22□□□□□ -0.93
AC004540.1-206ENST00000448056 COL4A5P29400 1685 aa9.21□□□□□ -0.93
AC004540.1-206ENST00000448056 PSMD14O00487 310 aa9.21□□□□□ -0.94
AC004540.1-206ENST00000448056 VIL1P09327 827 aaKnown RBP9.21□□□□□ -0.94
AC004540.1-206ENST00000448056 MCAMP43121 646 aa9.21□□□□□ -0.94
AC004540.1-206ENST00000448056 PDE1AP54750 535 aa9.21□□□□□ -0.94
AC004540.1-206ENST00000448056 EIF6P56537 245 aaKnown RBP9.21□□□□□ -0.94
AC004540.1-206ENST00000448056 TNIP1Q15025 636 aa9.21□□□□□ -0.94
AC004540.1-206ENST00000448056 STRIP1Q5VSL9 837 aa9.21□□□□□ -0.94
AC004540.1-206ENST00000448056 TSHZ3Q63HK5 1081 aa9.21□□□□□ -0.94
AC004540.1-206ENST00000448056 SPATA5Q8NB90 893 aa9.21□□□□□ -0.94
AC004540.1-206ENST00000448056 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.21□□□□□ -0.94
AC004540.1-206ENST00000448056 SNRKQ9NRH2 765 aa9.21□□□□□ -0.94
AC004540.1-206ENST00000448056 HMG20BQ9P0W2 317 aa9.21□□□□□ -0.94
AC004540.1-206ENST00000448056 TTC41PQ6P2S7 1318 aa9.21□□□□□ -0.94
AC004540.1-206ENST00000448056 FAM205AQ6ZU69 1335 aa9.21□□□□□ -0.94
AC004540.1-206ENST00000448056 A0A1B0GUL6 1792 aa9.2□□□□□ -0.94
AC004540.1-206ENST00000448056 POTEB2H3BUK9 544 aa9.2□□□□□ -0.94
AC004540.1-206ENST00000448056 ERC2O15083 957 aa9.2□□□□□ -0.94
AC004540.1-206ENST00000448056 CHAF1AQ13111 956 aaPredicted RBP9.2□□□□□ -0.94
AC004540.1-206ENST00000448056 DACT2Q5SW24 774 aa9.2□□□□□ -0.94
AC004540.1-206ENST00000448056 CIAPIN1Q6FI81 312 aa9.2□□□□□ -0.94
AC004540.1-206ENST00000448056 PI16Q6UXB8 463 aa9.2□□□□□ -0.94
AC004540.1-206ENST00000448056 WDR66Q8TBY9 1149 aa9.2□□□□□ -0.94
AC004540.1-206ENST00000448056 PI4K2BQ8TCG2 481 aa9.2□□□□□ -0.94
AC004540.1-206ENST00000448056 FBXW7Q969H0 707 aa9.2□□□□□ -0.94
AC004540.1-206ENST00000448056 HAUS7Q99871 368 aa9.2□□□□□ -0.94
AC004540.1-206ENST00000448056 BOLA2Q9H3K6 86 aa9.2□□□□□ -0.94
AC004540.1-206ENST00000448056 OSBPL3Q9H4L5 887 aa9.2□□□□□ -0.94
AC004540.1-206ENST00000448056 JAG2Q9Y219 1238 aa9.2□□□□□ -0.94
AC004540.1-206ENST00000448056 PDS5AQ29RF7 1337 aaKnown RBP9.2□□□□□ -0.94
AC004540.1-206ENST00000448056 ZC3H4Q9UPT8 1303 aaKnown RBP9.2□□□□□ -0.94
AC004540.1-206ENST00000448056 GLRX3O76003 335 aaKnown RBP9.19□□□□□ -0.94
AC004540.1-206ENST00000448056 CYP2E1P05181 493 aaPredicted RBP9.19□□□□□ -0.94
AC004540.1-206ENST00000448056 ZAP70P43403 619 aa9.19□□□□□ -0.94
AC004540.1-206ENST00000448056 FKBP1AP62942 108 aaKnown RBP9.19□□□□□ -0.94
AC004540.1-206ENST00000448056 MFSD14BQ5SR56 506 aa9.19□□□□□ -0.94
AC004540.1-206ENST00000448056 RSBN1LQ6PCB5 846 aaPredicted RBP9.19□□□□□ -0.94
AC004540.1-206ENST00000448056 TBC1D9Q6ZT07 1266 aa9.19□□□□□ -0.94
AC004540.1-206ENST00000448056 SKAP1Q86WV1 359 aa9.19□□□□□ -0.94
AC004540.1-206ENST00000448056 GPC2Q8N158 579 aa9.19□□□□□ -0.94
AC004540.1-206ENST00000448056 CERS5Q8N5B7 392 aa9.19□□□□□ -0.94
AC004540.1-206ENST00000448056 TBC1D22AQ8WUA7 517 aa9.19□□□□□ -0.94
AC004540.1-206ENST00000448056 GMLQ99445 158 aa9.19□□□□□ -0.94
AC004540.1-206ENST00000448056 MXD3Q9BW11 206 aa9.19□□□□□ -0.94
AC004540.1-206ENST00000448056 GPHNQ9NQX3 736 aaPredicted RBP9.19□□□□□ -0.94
AC004540.1-206ENST00000448056 GJA3Q9Y6H8 435 aa9.19□□□□□ -0.94
AC004540.1-206ENST00000448056 NDUFB9Q9Y6M9 179 aa9.19□□□□□ -0.94
AC004540.1-206ENST00000448056 AOX1Q06278 1338 aa9.19□□□□□ -0.94
AC004540.1-206ENST00000448056 ZNF541Q9H0D2 1346 aa9.19□□□□□ -0.94
AC004540.1-206ENST00000448056 SBF1O95248 1867 aa9.19□□□□□ -0.94
AC004540.1-206ENST00000448056 GLTPD2A6NH11 291 aa9.18□□□□□ -0.94
AC004540.1-206ENST00000448056 DDNO94850 711 aaPredicted RBP9.18□□□□□ -0.94
AC004540.1-206ENST00000448056 POTEJP0CG39 1038 aa9.18□□□□□ -0.94
AC004540.1-206ENST00000448056 YY1P25490 414 aa9.18□□□□□ -0.94
AC004540.1-206ENST00000448056 MFSD10Q14728 455 aa9.18□□□□□ -0.94
AC004540.1-206ENST00000448056 AGBL3Q8NEM8 1001 aa9.18□□□□□ -0.94
AC004540.1-206ENST00000448056 DPF2Q92785 391 aa9.18□□□□□ -0.94
AC004540.1-206ENST00000448056 DNAJC2Q99543 621 aaKnown RBP9.18□□□□□ -0.94
AC004540.1-206ENST00000448056 LARP6Q9BRS8 491 aaKnown RBP9.18□□□□□ -0.94
AC004540.1-206ENST00000448056 ANTXR1Q9H6X2 564 aa9.18□□□□□ -0.94
AC004540.1-206ENST00000448056 SALL1Q9NSC2 1324 aa9.18□□□□□ -0.94
AC004540.1-206ENST00000448056 SUGT1Q9Y2Z0 365 aa9.18□□□□□ -0.94
AC004540.1-206ENST00000448056 COL1A1P02452 1464 aaPredicted RBP9.17□□□□□ -0.94
AC004540.1-206ENST00000448056 MYO3BQ8WXR4 1341 aa9.17□□□□□ -0.94
AC004540.1-206ENST00000448056 GOLIM4O00461 696 aa9.17□□□□□ -0.94
AC004540.1-206ENST00000448056 MAP4K4O95819 1239 aaPredicted RBP9.17□□□□□ -0.94
AC004540.1-206ENST00000448056 RPS12P25398 132 aaKnown RBP9.17□□□□□ -0.94
AC004540.1-206ENST00000448056 GMPSP49915 693 aaPredicted RBP9.17□□□□□ -0.94
AC004540.1-206ENST00000448056 TTF1Q15361 905 aaPredicted RBP9.17□□□□□ -0.94
AC004540.1-206ENST00000448056 GRIK5Q16478 980 aa9.17□□□□□ -0.94
AC004540.1-206ENST00000448056 SPTY2D1Q68D10 685 aaPredicted RBP9.17□□□□□ -0.94
AC004540.1-206ENST00000448056 ZGPATQ8N5A5 531 aaKnown RBP9.17□□□□□ -0.94
AC004540.1-206ENST00000448056 EDC3Q96F86 508 aaKnown RBP9.17□□□□□ -0.94
AC004540.1-206ENST00000448056 PIH1D3Q9NQM4 214 aaKnown RBP9.17□□□□□ -0.94
AC004540.1-206ENST00000448056 WDR70Q9NW82 654 aa9.17□□□□□ -0.94
AC004540.1-206ENST00000448056 PAG1Q9NWQ8 432 aa9.17□□□□□ -0.94
AC004540.1-206ENST00000448056 LRP2BPQ9P2M1 347 aa9.17□□□□□ -0.94
AC004540.1-206ENST00000448056 ABCF2Q9UG63 623 aa9.17□□□□□ -0.94
AC004540.1-206ENST00000448056 ARAP2Q8WZ64 1704 aa9.17□□□□□ -0.94
AC004540.1-206ENST00000448056 KIF3CO14782 793 aa9.16□□□□□ -0.94
AC004540.1-206ENST00000448056 IGSF3O75054 1194 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms