RNA–Protein interactions for RNA: ENST00000440652.5

UBE2D4-203, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 2

Gene UBE2D4, Length 1,299 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-203ENST00000440652 CNTROBQ8N137 903 aa8.91□□□□□ -0.98
UBE2D4-203ENST00000440652 CNKSR1Q969H4 720 aa8.91□□□□□ -0.98
UBE2D4-203ENST00000440652 ZNF496Q96IT1 587 aaPredicted RBP8.91□□□□□ -0.98
UBE2D4-203ENST00000440652 HEG1Q9ULI3 1381 aa8.9□□□□□ -0.98
UBE2D4-203ENST00000440652 FAM177BA6PVY3 158 aa8.9□□□□□ -0.98
UBE2D4-203ENST00000440652 TRAF5O00463 557 aa8.9□□□□□ -0.98
UBE2D4-203ENST00000440652 DIAPH1O60610 1272 aaKnown RBP8.9□□□□□ -0.98
UBE2D4-203ENST00000440652 AOC2O75106 756 aa8.9□□□□□ -0.98
UBE2D4-203ENST00000440652 CAMTA2O94983 1202 aa8.9□□□□□ -0.98
UBE2D4-203ENST00000440652 NR3C2P08235 984 aa8.9□□□□□ -0.98
UBE2D4-203ENST00000440652 STYK1Q6J9G0 422 aa8.9□□□□□ -0.98
UBE2D4-203ENST00000440652 MASTLQ96GX5 879 aa8.9□□□□□ -0.98
UBE2D4-203ENST00000440652 CAPNS2Q96L46 248 aa8.9□□□□□ -0.98
UBE2D4-203ENST00000440652 RCAN3Q9UKA8 241 aa8.9□□□□□ -0.98
UBE2D4-203ENST00000440652 MAP4K5Q9Y4K4 846 aa8.9□□□□□ -0.98
UBE2D4-203ENST00000440652 SIPA1L3O60292 1781 aaPredicted RBP8.9□□□□□ -0.98
UBE2D4-203ENST00000440652 A0A087WZG4 1122 aa8.89□□□□□ -0.99
UBE2D4-203ENST00000440652 U2SURPO15042 1029 aaKnown RBP8.89□□□□□ -0.99
UBE2D4-203ENST00000440652 STARD3NLO95772 234 aa8.89□□□□□ -0.99
UBE2D4-203ENST00000440652 A1BGP04217 495 aa8.89□□□□□ -0.99
UBE2D4-203ENST00000440652 WDR4P57081 412 aaKnown RBP8.89□□□□□ -0.99
UBE2D4-203ENST00000440652 MAP2K1Q02750 393 aaPredicted RBP8.89□□□□□ -0.99
UBE2D4-203ENST00000440652 FKBP4Q02790 459 aaKnown RBP eCLIP8.89□□□□□ -0.99
UBE2D4-203ENST00000440652 NFX1Q12986 1120 aaKnown RBP8.89□□□□□ -0.99
UBE2D4-203ENST00000440652 NR5A1Q13285 461 aa8.89□□□□□ -0.99
UBE2D4-203ENST00000440652 ARID5BQ14865 1188 aa8.89□□□□□ -0.99
UBE2D4-203ENST00000440652 SETDB2Q96T68 719 aa8.89□□□□□ -0.99
UBE2D4-203ENST00000440652 DDX21Q9NR30 783 aaKnown RBP eCLIP8.89□□□□□ -0.99
UBE2D4-203ENST00000440652 PPP4R2Q9NY27 417 aa8.89□□□□□ -0.99
UBE2D4-203ENST00000440652 GJA3Q9Y6H8 435 aa8.89□□□□□ -0.99
UBE2D4-203ENST00000440652 TNRC18O15417 2968 aaPredicted RBP8.88□□□□□ -0.99
UBE2D4-203ENST00000440652 PRAMEF22A3QJZ6 481 aa8.88□□□□□ -0.99
UBE2D4-203ENST00000440652 KCNQ3O43525 872 aa8.88□□□□□ -0.99
UBE2D4-203ENST00000440652 NEFMP07197 916 aa8.88□□□□□ -0.99
UBE2D4-203ENST00000440652 IARSP41252 1262 aaKnown RBP8.88□□□□□ -0.99
UBE2D4-203ENST00000440652 IRX6P78412 446 aaPredicted RBP8.88□□□□□ -0.99
UBE2D4-203ENST00000440652 NR6A1Q15406 480 aa8.88□□□□□ -0.99
UBE2D4-203ENST00000440652 SOGA3Q5TF21 947 aa8.88□□□□□ -0.99
UBE2D4-203ENST00000440652 PDXDC2PQ6P474 469 aa8.88□□□□□ -0.99
UBE2D4-203ENST00000440652 NBPF5PQ86XG9 351 aaPredicted RBP8.88□□□□□ -0.99
UBE2D4-203ENST00000440652 DZIP3Q86Y13 1208 aaKnown RBP8.88□□□□□ -0.99
UBE2D4-203ENST00000440652 C7orf43Q8WVR3 580 aa8.88□□□□□ -0.99
UBE2D4-203ENST00000440652 MCOLN1Q9GZU1 580 aa8.88□□□□□ -0.99
UBE2D4-203ENST00000440652 FKBPLQ9UIM3 349 aa8.88□□□□□ -0.99
UBE2D4-203ENST00000440652 ABCC12Q96J65 1359 aa8.87□□□□□ -0.99
UBE2D4-203ENST00000440652 E9PSI1 815 aa8.87□□□□□ -0.99
UBE2D4-203ENST00000440652 AP1G2O75843 785 aa8.87□□□□□ -0.99
UBE2D4-203ENST00000440652 IL6STP40189 918 aaPredicted RBP8.87□□□□□ -0.99
UBE2D4-203ENST00000440652 SLFN5Q08AF3 891 aa8.87□□□□□ -0.99
UBE2D4-203ENST00000440652 LCE2CQ5TA81 110 aa8.87□□□□□ -0.99
UBE2D4-203ENST00000440652 PNMA8AQ86V59 439 aaPredicted RBP8.87□□□□□ -0.99
UBE2D4-203ENST00000440652 GPR101Q96P66 508 aaPredicted RBP8.87□□□□□ -0.99
UBE2D4-203ENST00000440652 SNED1Q8TER0 1413 aa8.87□□□□□ -0.99
UBE2D4-203ENST00000440652 FZD9O00144 591 aa8.86□□□□□ -0.99
UBE2D4-203ENST00000440652 EPS15P42566 896 aa8.86□□□□□ -0.99
UBE2D4-203ENST00000440652 SCNN1DP51172 638 aa8.86□□□□□ -0.99
UBE2D4-203ENST00000440652 BRPF1P55201 1214 aaPredicted RBP8.86□□□□□ -0.99
UBE2D4-203ENST00000440652 NEUROD2Q15784 382 aa8.86□□□□□ -0.99
UBE2D4-203ENST00000440652 MRPL14Q6P1L8 145 aaKnown RBP8.86□□□□□ -0.99
UBE2D4-203ENST00000440652 ZNF790Q6PG37 636 aa8.86□□□□□ -0.99
UBE2D4-203ENST00000440652 WDR63Q8IWG1 891 aa8.86□□□□□ -0.99
UBE2D4-203ENST00000440652 GPC2Q8N158 579 aa8.86□□□□□ -0.99
UBE2D4-203ENST00000440652 ITPKCQ96DU7 683 aa8.86□□□□□ -0.99
UBE2D4-203ENST00000440652 OCSTAMPQ9BR26 566 aa8.86□□□□□ -0.99
UBE2D4-203ENST00000440652 ZNF521Q96K83 1311 aa8.85□□□□□ -0.99
UBE2D4-203ENST00000440652 MAPK8IP3Q9UPT6 1336 aa8.85□□□□□ -0.99
UBE2D4-203ENST00000440652 COL3A1P02461 1466 aaPredicted RBP8.85□□□□□ -0.99
UBE2D4-203ENST00000440652 MAGEB6P1A0A0J9YX57 407 aa8.85□□□□□ -0.99
UBE2D4-203ENST00000440652 TCERG1O14776 1098 aaKnown RBP8.85□□□□□ -0.99
UBE2D4-203ENST00000440652 WFS1O76024 890 aa8.85□□□□□ -0.99
UBE2D4-203ENST00000440652 NPR1P16066 1061 aa8.85□□□□□ -0.99
UBE2D4-203ENST00000440652 LMOD1P29536 600 aaPredicted RBP8.85□□□□□ -0.99
UBE2D4-203ENST00000440652 RFC5P40937 340 aa8.85□□□□□ -0.99
UBE2D4-203ENST00000440652 SOX10P56693 466 aa8.85□□□□□ -0.99
UBE2D4-203ENST00000440652 TEFQ10587 303 aa8.85□□□□□ -0.99
UBE2D4-203ENST00000440652 DGKZQ13574 1117 aa8.85□□□□□ -0.99
UBE2D4-203ENST00000440652 CCDC27Q2M243 656 aa8.85□□□□□ -0.99
UBE2D4-203ENST00000440652 CST9Q5W186 159 aa8.85□□□□□ -0.99
UBE2D4-203ENST00000440652 NPM2Q86SE8 214 aaKnown RBP8.85□□□□□ -0.99
UBE2D4-203ENST00000440652 SYNE4Q8N205 404 aa8.85□□□□□ -0.99
UBE2D4-203ENST00000440652 EPS8L1Q8TE68 723 aa8.85□□□□□ -0.99
UBE2D4-203ENST00000440652 ZFP42Q96MM3 310 aa8.85□□□□□ -0.99
UBE2D4-203ENST00000440652 ZFAND3Q9H8U3 227 aa8.85□□□□□ -0.99
UBE2D4-203ENST00000440652 ZNF408Q9H9D4 720 aa8.85□□□□□ -0.99
UBE2D4-203ENST00000440652 TRPM7Q96QT4 1865 aa8.85□□□□□ -0.99
UBE2D4-203ENST00000440652 TERTO14746 1132 aaKnown RBP8.84□□□□□ -0.99
UBE2D4-203ENST00000440652 ZIC2O95409 532 aaPredicted RBP8.84□□□□□ -0.99
UBE2D4-203ENST00000440652 USP17L8P0C7I0 530 aa8.84□□□□□ -0.99
UBE2D4-203ENST00000440652 ECE1P42892 770 aa8.84□□□□□ -0.99
UBE2D4-203ENST00000440652 RGS19P49795 217 aa8.84□□□□□ -0.99
UBE2D4-203ENST00000440652 RRP1P56182 461 aaKnown RBP8.84□□□□□ -0.99
UBE2D4-203ENST00000440652 DUSP27Q5VZP5 1158 aa8.84□□□□□ -0.99
UBE2D4-203ENST00000440652 WWC1Q8IX03 1113 aa8.84□□□□□ -0.99
UBE2D4-203ENST00000440652 TRMT2AQ8IZ69 625 aaKnown RBP8.84□□□□□ -0.99
UBE2D4-203ENST00000440652 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.84□□□□□ -0.99
UBE2D4-203ENST00000440652 IL17REQ8NFR9 667 aa8.84□□□□□ -0.99
UBE2D4-203ENST00000440652 FMNL2Q96PY5 1086 aa8.84□□□□□ -0.99
UBE2D4-203ENST00000440652 HMX1Q9NP08 348 aaPredicted RBP8.84□□□□□ -0.99
UBE2D4-203ENST00000440652 NIP7Q9Y221 180 aaKnown RBP eCLIP8.84□□□□□ -0.99
UBE2D4-203ENST00000440652 CASP8AP2Q9UKL3 1982 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms