RNA–Protein interactions for RNA: ENST00000439984.7

PCNX1-202, Transcript of pecanex 1, humanhuman

TSL 1 (best) BASIC

Gene PCNX1, Length 6,988 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-202ENST00000439984 TTC14Q96N46 770 aa16.54■□□□□ 0.24
PCNX1-202ENST00000439984 RMND1Q9NWS8 449 aa16.54■□□□□ 0.24
PCNX1-202ENST00000439984 ODF2LQ9ULJ1 636 aa16.54■□□□□ 0.24
PCNX1-202ENST00000439984 PPP1R7Q15435 360 aa16.54■□□□□ 0.24
PCNX1-202ENST00000439984 SNCBQ16143 134 aa16.54■□□□□ 0.24
PCNX1-202ENST00000439984 HOMER2Q9NSB8 354 aa16.54■□□□□ 0.24
PCNX1-202ENST00000439984 ABCF2Q9UG63 623 aa16.54■□□□□ 0.24
PCNX1-202ENST00000439984 ANXA1P04083 346 aa16.53■□□□□ 0.24
PCNX1-202ENST00000439984 CACTINQ8WUQ7 758 aaKnown RBP16.53■□□□□ 0.24
PCNX1-202ENST00000439984 STMN2Q93045 179 aa16.53■□□□□ 0.24
PCNX1-202ENST00000439984 NAP1L3Q99457 506 aaPredicted RBP16.53■□□□□ 0.24
PCNX1-202ENST00000439984 ATP8B2P98198 1209 aa16.53■□□□□ 0.24
PCNX1-202ENST00000439984 SEPT14Q6ZU15 432 aa16.53■□□□□ 0.24
PCNX1-202ENST00000439984 FAM71BQ8TC56 605 aa16.53■□□□□ 0.24
PCNX1-202ENST00000439984 TRIM7Q9C029 511 aa16.53■□□□□ 0.24
PCNX1-202ENST00000439984 BRD2P25440 801 aaKnown RBP16.53■□□□□ 0.24
PCNX1-202ENST00000439984 STAT6P42226 847 aa16.53■□□□□ 0.24
PCNX1-202ENST00000439984 RBBP5Q15291 538 aaKnown RBP16.53■□□□□ 0.24
PCNX1-202ENST00000439984 CCDC170Q8IYT3 715 aa16.53■□□□□ 0.24
PCNX1-202ENST00000439984 SLF1Q9BQI6 1058 aa16.53■□□□□ 0.24
PCNX1-202ENST00000439984 TUBB2AQ13885 445 aa16.52■□□□□ 0.24
PCNX1-202ENST00000439984 METTL24Q5JXM2 366 aa16.52■□□□□ 0.24
PCNX1-202ENST00000439984 MCTP2Q6DN12 878 aa16.52■□□□□ 0.24
PCNX1-202ENST00000439984 TUBB2BQ9BVA1 445 aa16.52■□□□□ 0.24
PCNX1-202ENST00000439984 RASAL2Q9UJF2 1139 aa16.52■□□□□ 0.24
PCNX1-202ENST00000439984 SETSIPP0DME0 302 aa16.52■□□□□ 0.24
PCNX1-202ENST00000439984 PI4KAP2A4QPH2 592 aa16.52■□□□□ 0.24
PCNX1-202ENST00000439984 TNNC1P63316 161 aa16.52■□□□□ 0.24
PCNX1-202ENST00000439984 PI4KAP1Q8N8J0 262 aa16.52■□□□□ 0.24
PCNX1-202ENST00000439984 MAP3K2Q9Y2U5 619 aa16.52■□□□□ 0.24
PCNX1-202ENST00000439984 MRVI1Q9Y6F6 885 aa16.52■□□□□ 0.24
PCNX1-202ENST00000439984 WHAMMP3Q1A5X7 153 aa16.52■□□□□ 0.24
PCNX1-202ENST00000439984 LONRF2Q1L5Z9 754 aa16.52■□□□□ 0.23
PCNX1-202ENST00000439984 GRIPAP1Q4V328 841 aa16.52■□□□□ 0.23
PCNX1-202ENST00000439984 PPP2R2CQ9Y2T4 447 aa16.52■□□□□ 0.23
PCNX1-202ENST00000439984 KRT24Q2M2I5 525 aa16.52■□□□□ 0.23
PCNX1-202ENST00000439984 TSNAXIP1Q2TAA8 658 aa16.52■□□□□ 0.23
PCNX1-202ENST00000439984 JAKMIP2Q96AA8 810 aa16.52■□□□□ 0.23
PCNX1-202ENST00000439984 SPAG5Q96R06 1193 aa16.52■□□□□ 0.23
PCNX1-202ENST00000439984 CTNND2Q9UQB3 1225 aa16.52■□□□□ 0.23
PCNX1-202ENST00000439984 PNMA6AP0CW24 399 aaPredicted RBP16.51■□□□□ 0.23
PCNX1-202ENST00000439984 VAMP4O75379 141 aa16.51■□□□□ 0.23
PCNX1-202ENST00000439984 CEBPAP49715 358 aaPredicted RBP16.51■□□□□ 0.23
PCNX1-202ENST00000439984 CCDC38Q502W7 563 aa16.51■□□□□ 0.23
PCNX1-202ENST00000439984 PPP1R14CQ8TAE6 165 aa16.51■□□□□ 0.23
PCNX1-202ENST00000439984 NLRP12P59046 1061 aa16.51■□□□□ 0.23
PCNX1-202ENST00000439984 CYP26C1Q6V0L0 522 aa16.51■□□□□ 0.23
PCNX1-202ENST00000439984 GNL3LQ9NVN8 582 aaKnown RBP16.51■□□□□ 0.23
PCNX1-202ENST00000439984 SWAP70Q9UH65 585 aa16.51■□□□□ 0.23
PCNX1-202ENST00000439984 PA2G4Q9UQ80 394 aaKnown RBP16.51■□□□□ 0.23
PCNX1-202ENST00000439984 TMEM110-MUSTN1A8MSY1 372 aa16.51■□□□□ 0.23
PCNX1-202ENST00000439984 CLTAP09496 248 aa16.51■□□□□ 0.23
PCNX1-202ENST00000439984 RXRAP19793 462 aa16.51■□□□□ 0.23
PCNX1-202ENST00000439984 CACNA2D3Q8IZS8 1091 aa16.51■□□□□ 0.23
PCNX1-202ENST00000439984 SMC6Q96SB8 1091 aa16.51■□□□□ 0.23
PCNX1-202ENST00000439984 A6NNZ2 444 aa16.51■□□□□ 0.23
PCNX1-202ENST00000439984 TUBB8Q3ZCM7 444 aa16.51■□□□□ 0.23
PCNX1-202ENST00000439984 SMARCC2Q8TAQ2 1214 aa16.51■□□□□ 0.23
PCNX1-202ENST00000439984 TCP11L1Q9NUJ3 509 aa16.51■□□□□ 0.23
PCNX1-202ENST00000439984 A0A087WUV0 522 aaPredicted RBP16.5■□□□□ 0.23
PCNX1-202ENST00000439984 USHBP1Q8N6Y0 703 aa16.5■□□□□ 0.23
PCNX1-202ENST00000439984 PSMA7O14818 248 aa16.5■□□□□ 0.23
PCNX1-202ENST00000439984 VCXQ9H320 206 aa16.5■□□□□ 0.23
PCNX1-202ENST00000439984 KDM5CP41229 1560 aa16.5■□□□□ 0.23
PCNX1-202ENST00000439984 GSPT1P15170 499 aaKnown RBP16.5■□□□□ 0.23
PCNX1-202ENST00000439984 CTNNA2P26232 953 aa16.5■□□□□ 0.23
PCNX1-202ENST00000439984 GOLGA8FQ08AF8 430 aa16.5■□□□□ 0.23
PCNX1-202ENST00000439984 GOLGA8DPQ0D2H9 430 aa16.5■□□□□ 0.23
PCNX1-202ENST00000439984 OTUD7BQ6GQQ9 843 aa16.5■□□□□ 0.23
PCNX1-202ENST00000439984 DIXDC1Q155Q3 683 aa16.5■□□□□ 0.23
PCNX1-202ENST00000439984 TRMT44Q8IYL2 757 aaKnown RBP16.5■□□□□ 0.23
PCNX1-202ENST00000439984 TRIM31Q9BZY9 425 aa16.5■□□□□ 0.23
PCNX1-202ENST00000439984 PRC1O43663 620 aa16.5■□□□□ 0.23
PCNX1-202ENST00000439984 GUCY2FP51841 1108 aa16.5■□□□□ 0.23
PCNX1-202ENST00000439984 CFAP65Q6ZU64 1925 aaKnown RBP16.49■□□□□ 0.23
PCNX1-202ENST00000439984 ZBTB43O43298 467 aa16.49■□□□□ 0.23
PCNX1-202ENST00000439984 APBB1IPQ7Z5R6 666 aaPredicted RBP16.49■□□□□ 0.23
PCNX1-202ENST00000439984 ARHGEF2Q92974 986 aaKnown RBP16.49■□□□□ 0.23
PCNX1-202ENST00000439984 NEDD9Q14511 834 aa16.49■□□□□ 0.23
PCNX1-202ENST00000439984 IFT20Q8IY31 132 aa16.49■□□□□ 0.23
PCNX1-202ENST00000439984 CALML4Q96GE6 196 aa16.49■□□□□ 0.23
PCNX1-202ENST00000439984 ABCA8O94911 1581 aa16.49■□□□□ 0.23
PCNX1-202ENST00000439984 ZSCAN20P17040 1043 aaPredicted RBP16.49■□□□□ 0.23
PCNX1-202ENST00000439984 AMPD3Q01432 767 aa16.49■□□□□ 0.23
PCNX1-202ENST00000439984 PUS7Q96PZ0 661 aaKnown RBP16.49■□□□□ 0.23
PCNX1-202ENST00000439984 ST7Q9NRC1 585 aa16.49■□□□□ 0.23
PCNX1-202ENST00000439984 PTPN21Q16825 1174 aa16.49■□□□□ 0.23
PCNX1-202ENST00000439984 ZRANB1Q9UGI0 708 aa16.49■□□□□ 0.23
PCNX1-202ENST00000439984 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.49■□□□□ 0.23
PCNX1-202ENST00000439984 ARHGEF5Q12774 1597 aa16.48■□□□□ 0.23
PCNX1-202ENST00000439984 ZNF202O95125 648 aa16.48■□□□□ 0.23
PCNX1-202ENST00000439984 MAGEA9P43362 315 aa16.48■□□□□ 0.23
PCNX1-202ENST00000439984 IFT88Q13099 833 aa16.48■□□□□ 0.23
PCNX1-202ENST00000439984 MCMDC2Q4G0Z9 681 aa16.48■□□□□ 0.23
PCNX1-202ENST00000439984 KCTD16Q68DU8 428 aa16.48■□□□□ 0.23
PCNX1-202ENST00000439984 KLHL7Q8IXQ5 586 aa16.48■□□□□ 0.23
PCNX1-202ENST00000439984 NCOA5Q9HCD5 579 aaKnown RBP16.48■□□□□ 0.23
PCNX1-202ENST00000439984 MAPK8IP1Q9UQF2 711 aa16.48■□□□□ 0.23
PCNX1-202ENST00000439984 RNF40O75150 1001 aa16.48■□□□□ 0.23
PCNX1-202ENST00000439984 SMIM24O75264 130 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms