RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 DLGAP5Q15398 846 aa14.9□□□□□ -0.02
RTN4-211ENST00000438462 STRIP1Q5VSL9 837 aa14.9□□□□□ -0.02
RTN4-211ENST00000438462 OGDHLQ9ULD0 1010 aa14.9□□□□□ -0.02
RTN4-211ENST00000438462 PDHXO00330 501 aa14.89□□□□□ -0.03
RTN4-211ENST00000438462 IRF6O14896 467 aa14.89□□□□□ -0.03
RTN4-211ENST00000438462 BCRP11274 1271 aa14.89□□□□□ -0.03
RTN4-211ENST00000438462 COL6A1P12109 1028 aa14.89□□□□□ -0.03
RTN4-211ENST00000438462 PDE3AQ14432 1141 aa14.89□□□□□ -0.03
RTN4-211ENST00000438462 RASA3Q14644 834 aa14.89□□□□□ -0.03
RTN4-211ENST00000438462 SF3B3Q15393 1217 aaKnown RBP14.89□□□□□ -0.03
RTN4-211ENST00000438462 CCDC85BQ15834 202 aaPredicted RBP14.89□□□□□ -0.03
RTN4-211ENST00000438462 AKNAD1Q5T1N1 836 aa14.89□□□□□ -0.03
RTN4-211ENST00000438462 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.89□□□□□ -0.03
RTN4-211ENST00000438462 KHSRPQ92945 711 aaKnown RBP eCLIP14.89□□□□□ -0.033e-8■■□□□ 11.5
RTN4-211ENST00000438462 GAS2L1Q99501 681 aaPredicted RBP14.89□□□□□ -0.03
RTN4-211ENST00000438462 WDFY4Q6ZS81 3184 aa14.89□□□□□ -0.03
RTN4-211ENST00000438462 MAP3K9P80192 1104 aa14.88□□□□□ -0.03
RTN4-211ENST00000438462 CDAN1Q8IWY9 1227 aa14.88□□□□□ -0.03
RTN4-211ENST00000438462 CFAP54Q96N23 3096 aa14.88□□□□□ -0.03
RTN4-211ENST00000438462 AOX1Q06278 1338 aa14.88□□□□□ -0.03
RTN4-211ENST00000438462 USP34Q70CQ2 3546 aa14.87□□□□□ -0.03
RTN4-211ENST00000438462 TNPO2O14787 897 aaKnown RBP14.87□□□□□ -0.03
RTN4-211ENST00000438462 ANKRD23Q86SG2 305 aa14.87□□□□□ -0.03
RTN4-211ENST00000438462 SNCAIPQ9Y6H5 919 aa14.87□□□□□ -0.03
RTN4-211ENST00000438462 REV3LO60673 3130 aa14.87□□□□□ -0.03
RTN4-211ENST00000438462 MED23Q9ULK4 1368 aa14.86□□□□□ -0.03
RTN4-211ENST00000438462 MYO1BO43795 1136 aa14.86□□□□□ -0.03
RTN4-211ENST00000438462 U2AF1L5P0DN76 240 aaPredicted RBP14.86□□□□□ -0.03
RTN4-211ENST00000438462 KCNQ1P51787 676 aa14.86□□□□□ -0.03
RTN4-211ENST00000438462 U2AF1Q01081 240 aaKnown RBP eCLIP14.86□□□□□ -0.034e-6■□□□□ 9.4
RTN4-211ENST00000438462 MCM10Q7L590 875 aa14.86□□□□□ -0.03
RTN4-211ENST00000438462 ZNF576Q9H609 170 aa14.86□□□□□ -0.03
RTN4-211ENST00000438462 HMX1Q9NP08 348 aaPredicted RBP14.86□□□□□ -0.03
RTN4-211ENST00000438462 CXXC1Q9P0U4 656 aaPredicted RBP14.86□□□□□ -0.03
RTN4-211ENST00000438462 XDHP47989 1333 aa14.86□□□□□ -0.03
RTN4-211ENST00000438462 LRRC37A2A6NM11 1700 aa14.86□□□□□ -0.03
RTN4-211ENST00000438462 ST18O60284 1047 aa14.85□□□□□ -0.03
RTN4-211ENST00000438462 HMGCRP04035 888 aa14.85□□□□□ -0.03
RTN4-211ENST00000438462 DNAJB2P25686 324 aa14.85□□□□□ -0.03
RTN4-211ENST00000438462 TFF2Q03403 129 aa14.85□□□□□ -0.03
RTN4-211ENST00000438462 TRIM32Q13049 653 aa14.85□□□□□ -0.03
RTN4-211ENST00000438462 ERO1BQ86YB8 467 aa14.85□□□□□ -0.03
RTN4-211ENST00000438462 FBXL18Q96ME1 805 aa14.85□□□□□ -0.03
RTN4-211ENST00000438462 THUMPD2Q9BTF0 503 aaKnown RBP14.85□□□□□ -0.03
RTN4-211ENST00000438462 PRKAG2Q9UGJ0 569 aa14.85□□□□□ -0.03
RTN4-211ENST00000438462 PRR33A8MZF0 331 aa14.84□□□□□ -0.03
RTN4-211ENST00000438462 DIAPH1O60610 1272 aaKnown RBP14.84□□□□□ -0.03
RTN4-211ENST00000438462 PPIL2Q13356 520 aa14.84□□□□□ -0.03
RTN4-211ENST00000438462 HSP90AB3PQ58FF7 597 aa14.84□□□□□ -0.03
RTN4-211ENST00000438462 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.84□□□□□ -0.03
RTN4-211ENST00000438462 PARK7Q99497 189 aaKnown RBP14.84□□□□□ -0.03
RTN4-211ENST00000438462 SEC31BQ9NQW1 1179 aa14.84□□□□□ -0.03
RTN4-211ENST00000438462 FRMPD3Q5JV73 1810 aa14.83□□□□□ -0.04
RTN4-211ENST00000438462 SPDYE2BA6NHP3 402 aa14.83□□□□□ -0.04
RTN4-211ENST00000438462 SPDYE6P0CI01 402 aa14.83□□□□□ -0.04
RTN4-211ENST00000438462 CYP2C8P10632 490 aa14.83□□□□□ -0.04
RTN4-211ENST00000438462 ATP2B4P23634 1241 aa14.83□□□□□ -0.04
RTN4-211ENST00000438462 MIS18AQ9NYP9 233 aa14.83□□□□□ -0.04
RTN4-211ENST00000438462 DOCK3Q8IZD9 2030 aa14.83□□□□□ -0.04
RTN4-211ENST00000438462 KRT37O76014 449 aa14.82□□□□□ -0.04
RTN4-211ENST00000438462 CFAP100Q494V2 611 aa14.82□□□□□ -0.04
RTN4-211ENST00000438462 TTLL5Q6EMB2 1281 aa14.82□□□□□ -0.04
RTN4-211ENST00000438462 LRP10Q7Z4F1 713 aa14.82□□□□□ -0.04
RTN4-211ENST00000438462 PHOX2BQ99453 314 aa14.82□□□□□ -0.04
RTN4-211ENST00000438462 PRDM12Q9H4Q4 367 aa14.82□□□□□ -0.04
RTN4-211ENST00000438462 ZDBF2Q9HCK1 2354 aa14.82□□□□□ -0.04
RTN4-211ENST00000438462 AK9Q5TCS8 1911 aa14.82□□□□□ -0.04
RTN4-211ENST00000438462 SPEF2Q9C093 1822 aa14.81□□□□□ -0.04
RTN4-211ENST00000438462 RIC3Q7Z5B4 369 aa14.81□□□□□ -0.04
RTN4-211ENST00000438462 FAM89AQ96GI7 184 aa14.81□□□□□ -0.04
RTN4-211ENST00000438462 PRMT6Q96LA8 375 aaPredicted RBP14.81□□□□□ -0.04
RTN4-211ENST00000438462 RNPC3Q96LT9 517 aaKnown RBP14.81□□□□□ -0.04
RTN4-211ENST00000438462 TEPSINQ96N21 525 aa14.81□□□□□ -0.04
RTN4-211ENST00000438462 POLR3GLQ9BT43 218 aa14.81□□□□□ -0.04
RTN4-211ENST00000438462 DCTN1Q14203 1278 aa14.8□□□□□ -0.04
RTN4-211ENST00000438462 ADGRE1Q14246 886 aa14.8□□□□□ -0.04
RTN4-211ENST00000438462 AAK1Q2M2I8 961 aa14.8□□□□□ -0.04
RTN4-211ENST00000438462 RTF1Q92541 710 aaKnown RBP14.8□□□□□ -0.04
RTN4-211ENST00000438462 TIFAQ96CG3 184 aa14.8□□□□□ -0.04
RTN4-211ENST00000438462 UIMC1Q96RL1 719 aa14.8□□□□□ -0.04
RTN4-211ENST00000438462 COA1Q9GZY4 146 aa14.8□□□□□ -0.04
RTN4-211ENST00000438462 TSPYL2Q9H2G4 693 aaPredicted RBP14.8□□□□□ -0.04
RTN4-211ENST00000438462 F8W031 263 aaPredicted RBP14.79□□□□□ -0.04
RTN4-211ENST00000438462 GTF2IP78347 998 aa14.79□□□□□ -0.04
RTN4-211ENST00000438462 TNFAIP1Q13829 316 aa14.79□□□□□ -0.04
RTN4-211ENST00000438462 RTL5Q5HYW3 569 aaPredicted RBP14.79□□□□□ -0.04
RTN4-211ENST00000438462 BADQ92934 168 aa14.79□□□□□ -0.04
RTN4-211ENST00000438462 ZKSCAN4Q969J2 545 aaPredicted RBP14.79□□□□□ -0.04
RTN4-211ENST00000438462 PHACTR3Q96KR7 559 aa14.79□□□□□ -0.04
RTN4-211ENST00000438462 WRNIP1Q96S55 665 aa14.79□□□□□ -0.04
RTN4-211ENST00000438462 CACNA1GO43497 2377 aa14.78□□□□□ -0.04
RTN4-211ENST00000438462 C5orf42Q9H799 3197 aa14.78□□□□□ -0.04
RTN4-211ENST00000438462 PI4K2BG5E9Z4 385 aa14.78□□□□□ -0.04
RTN4-211ENST00000438462 IGFBP4P22692 258 aa14.78□□□□□ -0.04
RTN4-211ENST00000438462 MOGSQ13724 837 aa14.78□□□□□ -0.04
RTN4-211ENST00000438462 COA7Q96BR5 231 aa14.78□□□□□ -0.04
RTN4-211ENST00000438462 U2SURPO15042 1029 aaKnown RBP14.77□□□□□ -0.05
RTN4-211ENST00000438462 ANXA1P04083 346 aa14.77□□□□□ -0.05
RTN4-211ENST00000438462 ATN1P54259 1190 aaPredicted RBP14.77□□□□□ -0.05
RTN4-211ENST00000438462 PROSER3Q2NL68 480 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms