RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 MRPL18Q9H0U6 180 aaKnown RBP6.36□□□□□ -1.39
TRAPPC13-204ENST00000438419 SOX17Q9H6I2 414 aaPredicted RBP6.36□□□□□ -1.39
TRAPPC13-204ENST00000438419 TXKP42681 527 aa6.35□□□□□ -1.39
TRAPPC13-204ENST00000438419 IREB2P48200 963 aaKnown RBP6.35□□□□□ -1.39
TRAPPC13-204ENST00000438419 FCGRTP55899 365 aa6.35□□□□□ -1.39
TRAPPC13-204ENST00000438419 NLRP12P59046 1061 aa6.35□□□□□ -1.39
TRAPPC13-204ENST00000438419 TAGLNQ01995 201 aaKnown RBP6.35□□□□□ -1.39
TRAPPC13-204ENST00000438419 FAAP100Q0VG06 881 aa6.35□□□□□ -1.39
TRAPPC13-204ENST00000438419 KIAA1211Q6ZU35 1233 aa6.35□□□□□ -1.39
TRAPPC13-204ENST00000438419 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.35□□□□□ -1.39
TRAPPC13-204ENST00000438419 TXNRD3Q86VQ6 643 aa6.35□□□□□ -1.39
TRAPPC13-204ENST00000438419 C3orf58Q8NDZ4 430 aa6.35□□□□□ -1.39
TRAPPC13-204ENST00000438419 DCAF11Q8TEB1 546 aa6.35□□□□□ -1.39
TRAPPC13-204ENST00000438419 UBASH3BQ8TF42 649 aa6.35□□□□□ -1.39
TRAPPC13-204ENST00000438419 SSBP4Q9BWG4 385 aaPredicted RBP6.35□□□□□ -1.39
TRAPPC13-204ENST00000438419 NRSN2Q9GZP1 204 aa6.35□□□□□ -1.39
TRAPPC13-204ENST00000438419 B3GALT4O96024 378 aa6.34□□□□□ -1.39
TRAPPC13-204ENST00000438419 AGGF1Q8N302 714 aaeCLIP6.34□□□□□ -1.39
TRAPPC13-204ENST00000438419 FRMD6Q96NE9 622 aa6.34□□□□□ -1.39
TRAPPC13-204ENST00000438419 BCL11AQ9H165 835 aa6.34□□□□□ -1.39
TRAPPC13-204ENST00000438419 DLGAP3O95886 979 aa6.33□□□□□ -1.4
TRAPPC13-204ENST00000438419 ARL4DP49703 201 aa6.33□□□□□ -1.4
TRAPPC13-204ENST00000438419 DUOXA2Q1HG44 320 aa6.33□□□□□ -1.4
TRAPPC13-204ENST00000438419 ZNF326Q5BKZ1 582 aaKnown RBP6.33□□□□□ -1.4
TRAPPC13-204ENST00000438419 RPS26P11Q5JNZ5 115 aaPredicted RBP6.33□□□□□ -1.4
TRAPPC13-204ENST00000438419 GIPC2Q8TF65 315 aa6.33□□□□□ -1.4
TRAPPC13-204ENST00000438419 DUSP9Q99956 384 aaKnown RBP6.33□□□□□ -1.4
TRAPPC13-204ENST00000438419 AKTIPQ9H8T0 292 aa6.33□□□□□ -1.4
TRAPPC13-204ENST00000438419 TPSG1Q9NRR2 321 aa6.33□□□□□ -1.4
TRAPPC13-204ENST00000438419 SPG7Q9UQ90 795 aa6.33□□□□□ -1.4
TRAPPC13-204ENST00000438419 GIPC1O14908 333 aa6.33□□□□□ -1.4
TRAPPC13-204ENST00000438419 ITGAEP38570 1179 aa6.33□□□□□ -1.4
TRAPPC13-204ENST00000438419 GSTM4Q03013 218 aa6.33□□□□□ -1.4
TRAPPC13-204ENST00000438419 RSPO4Q2I0M5 234 aaPredicted RBP6.33□□□□□ -1.4
TRAPPC13-204ENST00000438419 DTHD1Q6ZMT9 781 aa6.33□□□□□ -1.4
TRAPPC13-204ENST00000438419 Q6ZS46 218 aa6.33□□□□□ -1.4
TRAPPC13-204ENST00000438419 ACAD11Q709F0 780 aa6.33□□□□□ -1.4
TRAPPC13-204ENST00000438419 MEGF10Q96KG7 1140 aa6.33□□□□□ -1.4
TRAPPC13-204ENST00000438419 TRIM56Q9BRZ2 755 aaKnown RBP6.33□□□□□ -1.4
TRAPPC13-204ENST00000438419 PPP4R2Q9NY27 417 aa6.33□□□□□ -1.4
TRAPPC13-204ENST00000438419 RBM47A0AV96 593 aaKnown RBP6.32□□□□□ -1.4
TRAPPC13-204ENST00000438419 PAX4O43316 350 aa6.32□□□□□ -1.4
TRAPPC13-204ENST00000438419 CTSBP07858 339 aa6.32□□□□□ -1.4
TRAPPC13-204ENST00000438419 XRCC5P13010 732 aaKnown RBP6.32□□□□□ -1.4
TRAPPC13-204ENST00000438419 GNA15P30679 374 aa6.32□□□□□ -1.4
TRAPPC13-204ENST00000438419 ZNF157P51786 506 aaPredicted RBP6.32□□□□□ -1.4
TRAPPC13-204ENST00000438419 DZIP1LQ8IYY4 767 aaKnown RBP6.32□□□□□ -1.4
TRAPPC13-204ENST00000438419 SRCIN1Q9C0H9 1055 aa6.32□□□□□ -1.4
TRAPPC13-204ENST00000438419 C12orf49Q9H741 205 aa6.32□□□□□ -1.4
TRAPPC13-204ENST00000438419 LOC100289279A0A1B0GTE1 492 aa6.31□□□□□ -1.4
TRAPPC13-204ENST00000438419 ECEL1O95672 775 aa6.31□□□□□ -1.4
TRAPPC13-204ENST00000438419 XPCQ01831 940 aaPredicted RBP6.31□□□□□ -1.4
TRAPPC13-204ENST00000438419 MCTP1Q6DN14 999 aa6.31□□□□□ -1.4
TRAPPC13-204ENST00000438419 UBL7Q96S82 380 aaPredicted RBP6.31□□□□□ -1.4
TRAPPC13-204ENST00000438419 PARP2Q9UGN5 583 aa6.31□□□□□ -1.4
TRAPPC13-204ENST00000438419 AKAP2Q9Y2D5 859 aa6.31□□□□□ -1.4
TRAPPC13-204ENST00000438419 GSTT1P30711 240 aa6.3□□□□□ -1.4
TRAPPC13-204ENST00000438419 LRP8Q14114 963 aa6.3□□□□□ -1.4
TRAPPC13-204ENST00000438419 USP26Q9BXU7 913 aa6.3□□□□□ -1.4
TRAPPC13-204ENST00000438419 ZFYVE1Q9HBF4 777 aa6.3□□□□□ -1.4
TRAPPC13-204ENST00000438419 AK5Q9Y6K8 562 aa6.3□□□□□ -1.4
TRAPPC13-204ENST00000438419 MEGF11A6BM72 1044 aa6.29□□□□□ -1.4
TRAPPC13-204ENST00000438419 USP17L7P0C7H9 530 aa6.29□□□□□ -1.4
TRAPPC13-204ENST00000438419 ZNF16P17020 682 aaPredicted RBP6.29□□□□□ -1.4
TRAPPC13-204ENST00000438419 MAOBP27338 520 aa6.29□□□□□ -1.4
TRAPPC13-204ENST00000438419 DAB2P98082 770 aa6.29□□□□□ -1.4
TRAPPC13-204ENST00000438419 PSMD2Q13200 908 aa6.29□□□□□ -1.4
TRAPPC13-204ENST00000438419 NKAPLQ5M9Q1 402 aa6.29□□□□□ -1.4
TRAPPC13-204ENST00000438419 FAM161BQ96MY7 647 aa6.29□□□□□ -1.4
TRAPPC13-204ENST00000438419 RUSC1Q9BVN2 902 aa6.29□□□□□ -1.4
TRAPPC13-204ENST00000438419 TMPRSS13Q9BYE2 586 aa6.29□□□□□ -1.4
TRAPPC13-204ENST00000438419 FAM8A1Q9UBU6 413 aa6.29□□□□□ -1.4
TRAPPC13-204ENST00000438419 GLB1P16278 677 aa6.28□□□□□ -1.4
TRAPPC13-204ENST00000438419 EIF4BP23588 611 aaKnown RBP6.28□□□□□ -1.4
TRAPPC13-204ENST00000438419 FZD5Q13467 585 aa6.28□□□□□ -1.4
TRAPPC13-204ENST00000438419 POU4F3Q15319 338 aa6.28□□□□□ -1.4
TRAPPC13-204ENST00000438419 TMC4Q7Z404 712 aa6.28□□□□□ -1.4
TRAPPC13-204ENST00000438419 STK35Q8TDR2 534 aa6.28□□□□□ -1.4
TRAPPC13-204ENST00000438419 ANKRD24Q8TF21 1146 aa6.28□□□□□ -1.4
TRAPPC13-204ENST00000438419 MRS2Q9HD23 443 aa6.28□□□□□ -1.4
TRAPPC13-204ENST00000438419 TMEM39AQ9NV64 488 aa6.28□□□□□ -1.4
TRAPPC13-204ENST00000438419 DYRK3O43781 588 aa6.27□□□□□ -1.41
TRAPPC13-204ENST00000438419 FBXO24O75426 580 aa6.27□□□□□ -1.41
TRAPPC13-204ENST00000438419 CYP11A1P05108 521 aa6.27□□□□□ -1.41
TRAPPC13-204ENST00000438419 TPTE2Q6XPS3 522 aa6.27□□□□□ -1.41
TRAPPC13-204ENST00000438419 TP53INP1Q96A56 240 aa6.27□□□□□ -1.41
TRAPPC13-204ENST00000438419 FAM46AQ96IP4 442 aaKnown RBP6.27□□□□□ -1.41
TRAPPC13-204ENST00000438419 NECAB3Q96P71 396 aaPredicted RBP6.27□□□□□ -1.41
TRAPPC13-204ENST00000438419 RNF208Q9H0X6 261 aa6.27□□□□□ -1.41
TRAPPC13-204ENST00000438419 GPN3Q9UHW5 284 aaPredicted RBP6.27□□□□□ -1.41
TRAPPC13-204ENST00000438419 ENC1O14682 589 aa6.26□□□□□ -1.41
TRAPPC13-204ENST00000438419 EIF4EBP3O60516 100 aaPredicted RBP6.26□□□□□ -1.41
TRAPPC13-204ENST00000438419 PAGE1O75459 146 aa6.26□□□□□ -1.41
TRAPPC13-204ENST00000438419 AP3B2Q13367 1082 aa6.26□□□□□ -1.41
TRAPPC13-204ENST00000438419 EXOSC6Q5RKV6 272 aaKnown RBP6.26□□□□□ -1.41
TRAPPC13-204ENST00000438419 PDZD3Q86UT5 571 aa6.26□□□□□ -1.41
TRAPPC13-204ENST00000438419 ARMC10Q8N2F6 343 aa6.26□□□□□ -1.41
TRAPPC13-204ENST00000438419 SMG8Q8ND04 991 aaKnown RBP6.26□□□□□ -1.41
TRAPPC13-204ENST00000438419 DDX54Q8TDD1 881 aaKnown RBP6.26□□□□□ -1.41
TRAPPC13-204ENST00000438419 PPM1HQ9ULR3 514 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 132.3 ms