RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 HAND2P61296 217 aa30.33■■■□□ 2.45
CPNE1-216ENST00000437340 DEFB132Q7Z7B7 95 aa30.33■■■□□ 2.45
CPNE1-216ENST00000437340 GAS2L3Q86XJ1 694 aa30.33■■■□□ 2.45
CPNE1-216ENST00000437340 MB21D2Q8IYB1 491 aaPredicted RBP30.33■■■□□ 2.45
CPNE1-216ENST00000437340 ANO8Q9HCE9 1232 aaPredicted RBP30.33■■■□□ 2.45
CPNE1-216ENST00000437340 TNRC6CQ9HCJ0 1690 aaKnown RBP30.33■■■□□ 2.45
CPNE1-216ENST00000437340 APOBRQ0VD83 1088 aa30.33■■■□□ 2.45
CPNE1-216ENST00000437340 FOXD4L6Q3SYB3 417 aaPredicted RBP30.33■■■□□ 2.45
CPNE1-216ENST00000437340 FOXD4L3Q6VB84 417 aaPredicted RBP30.33■■■□□ 2.45
CPNE1-216ENST00000437340 PNPLA7Q6ZV29 1317 aa30.32■■■□□ 2.44
CPNE1-216ENST00000437340 RALYLQ86SE5 291 aaKnown RBP30.32■■■□□ 2.44
CPNE1-216ENST00000437340 PATL2C9JE40 543 aaKnown RBP30.31■■■□□ 2.44
CPNE1-216ENST00000437340 CAVIN4Q5BKX8 364 aa30.31■■■□□ 2.44
CPNE1-216ENST00000437340 CNPY2Q9Y2B0 182 aa30.31■■■□□ 2.44
CPNE1-216ENST00000437340 GNAT2P19087 354 aa30.31■■■□□ 2.44
CPNE1-216ENST00000437340 HMGN5P82970 282 aaKnown RBP30.31■■■□□ 2.44
CPNE1-216ENST00000437340 ANKRD2Q9GZV1 360 aa30.31■■■□□ 2.44
CPNE1-216ENST00000437340 TAF1P21675 1872 aa30.3■■■□□ 2.44
CPNE1-216ENST00000437340 APPP05067 770 aa30.3■■■□□ 2.44
CPNE1-216ENST00000437340 GDPD2Q9HCC8 539 aa30.3■■■□□ 2.44
CPNE1-216ENST00000437340 JAK2O60674 1132 aa30.29■■■□□ 2.44
CPNE1-216ENST00000437340 PDIA3P30101 505 aaKnown RBP30.29■■■□□ 2.44
CPNE1-216ENST00000437340 TRDNQ13061 729 aa30.29■■■□□ 2.44
CPNE1-216ENST00000437340 CDC37L1Q7L3B6 337 aa30.29■■■□□ 2.44
CPNE1-216ENST00000437340 CCDC24Q8N4L8 307 aa30.29■■■□□ 2.44
CPNE1-216ENST00000437340 FLAD1Q8NFF5 587 aa30.29■■■□□ 2.44
CPNE1-216ENST00000437340 SYAP1Q96A49 352 aaPredicted RBP30.29■■■□□ 2.44
CPNE1-216ENST00000437340 KIF3AQ9Y496 699 aa30.29■■■□□ 2.44
CPNE1-216ENST00000437340 PRC1O43663 620 aa30.28■■■□□ 2.44
CPNE1-216ENST00000437340 TM4SF1P30408 202 aa30.28■■■□□ 2.44
CPNE1-216ENST00000437340 NSUN7Q8NE18 718 aaKnown RBP30.28■■■□□ 2.44
CPNE1-216ENST00000437340 TMEM63CQ9P1W3 806 aa30.28■■■□□ 2.44
CPNE1-216ENST00000437340 LRP2BPQ9P2M1 347 aa30.28■■■□□ 2.44
CPNE1-216ENST00000437340 NSFL1CQ9UNZ2 370 aaKnown RBP30.28■■■□□ 2.44
CPNE1-216ENST00000437340 SEMA3EO15041 775 aa30.28■■■□□ 2.44
CPNE1-216ENST00000437340 DTNBO60941 627 aa30.28■■■□□ 2.44
CPNE1-216ENST00000437340 MBD4O95243 580 aa30.28■■■□□ 2.44
CPNE1-216ENST00000437340 DENND2AQ9ULE3 1009 aa30.28■■■□□ 2.44
CPNE1-216ENST00000437340 GYG1P46976 350 aa30.27■■■□□ 2.44
CPNE1-216ENST00000437340 CHST3Q7LGC8 479 aa30.27■■■□□ 2.44
CPNE1-216ENST00000437340 NBPF3Q9H094 633 aa30.27■■■□□ 2.44
CPNE1-216ENST00000437340 TCHHQ07283 1943 aa30.26■■■□□ 2.44
CPNE1-216ENST00000437340 ZBTB22O15209 634 aa30.26■■■□□ 2.44
CPNE1-216ENST00000437340 UBE2HP62256 183 aa30.26■■■□□ 2.44
CPNE1-216ENST00000437340 DNM1Q05193 864 aaKnown RBP30.26■■■□□ 2.44
CPNE1-216ENST00000437340 SLC15A2Q16348 729 aa30.26■■■□□ 2.44
CPNE1-216ENST00000437340 FAM184AQ8NB25 1140 aa30.26■■■□□ 2.44
CPNE1-216ENST00000437340 RBM27Q9P2N5 1060 aaKnown RBP30.26■■■□□ 2.44
CPNE1-216ENST00000437340 BRPF3Q9ULD4 1205 aa30.26■■■□□ 2.44
CPNE1-216ENST00000437340 GADD45BO75293 160 aaPredicted RBP30.26■■■□□ 2.43
CPNE1-216ENST00000437340 FBXO33Q7Z6M2 555 aa30.26■■■□□ 2.43
CPNE1-216ENST00000437340 VPS37DQ86XT2 251 aa30.26■■■□□ 2.43
CPNE1-216ENST00000437340 IFNL3Q8IZI9 196 aa30.26■■■□□ 2.43
CPNE1-216ENST00000437340 FAM84BQ96KN1 310 aaPredicted RBP30.26■■■□□ 2.43
CPNE1-216ENST00000437340 ANTXR2P58335 489 aa30.25■■■□□ 2.43
CPNE1-216ENST00000437340 DDR1Q08345 913 aa30.25■■■□□ 2.43
CPNE1-216ENST00000437340 STK32BQ9NY57 414 aa30.25■■■□□ 2.43
CPNE1-216ENST00000437340 PDS5AQ29RF7 1337 aaKnown RBP30.25■■■□□ 2.43
CPNE1-216ENST00000437340 CTDNEP1O95476 244 aa30.24■■■□□ 2.43
CPNE1-216ENST00000437340 KRT85P78386 507 aa30.24■■■□□ 2.43
CPNE1-216ENST00000437340 CNBD1Q8NA66 436 aa30.24■■■□□ 2.43
CPNE1-216ENST00000437340 NAPBQ9H115 298 aa30.24■■■□□ 2.43
CPNE1-216ENST00000437340 SALL1Q9NSC2 1324 aa30.24■■■□□ 2.43
CPNE1-216ENST00000437340 NPHP1O15259 732 aa30.23■■■□□ 2.43
CPNE1-216ENST00000437340 TBC1D10CQ8IV04 446 aa30.23■■■□□ 2.43
CPNE1-216ENST00000437340 ARMT1Q9H993 441 aa30.23■■■□□ 2.43
CPNE1-216ENST00000437340 NRXN2Q9P2S2 1712 aa30.23■■■□□ 2.43
CPNE1-216ENST00000437340 PTPDC1A2A3K4 754 aa30.23■■■□□ 2.43
CPNE1-216ENST00000437340 FIBPO43427 364 aa30.23■■■□□ 2.43
CPNE1-216ENST00000437340 PRR5LQ6MZQ0 368 aa30.23■■■□□ 2.43
CPNE1-216ENST00000437340 NACAP1Q9BZK3 213 aa30.23■■■□□ 2.43
CPNE1-216ENST00000437340 EPB41L4AQ9HCS5 686 aaPredicted RBP30.23■■■□□ 2.43
CPNE1-216ENST00000437340 GSG1L2A8MUP6 293 aa30.22■■■□□ 2.43
CPNE1-216ENST00000437340 POLRMTO00411 1230 aaKnown RBP30.22■■■□□ 2.43
CPNE1-216ENST00000437340 SERPINB2P05120 415 aa30.22■■■□□ 2.43
CPNE1-216ENST00000437340 CCT2P78371 535 aaKnown RBP30.22■■■□□ 2.43
CPNE1-216ENST00000437340 NAA16Q6N069 864 aaPredicted RBP30.22■■■□□ 2.43
CPNE1-216ENST00000437340 DHX16O60231 1041 aaKnown RBP30.21■■■□□ 2.43
CPNE1-216ENST00000437340 ZSCAN16Q9H4T2 348 aaPredicted RBP30.21■■■□□ 2.43
CPNE1-216ENST00000437340 COL1A1P02452 1464 aaPredicted RBP30.21■■■□□ 2.43
CPNE1-216ENST00000437340 H3BQV1 296 aa30.2■■■□□ 2.43
CPNE1-216ENST00000437340 IFFO2Q5TF58 517 aa30.2■■■□□ 2.43
CPNE1-216ENST00000437340 LRSAM1Q6UWE0 723 aa30.2■■■□□ 2.43
CPNE1-216ENST00000437340 DDX11Q96FC9 970 aa30.2■■■□□ 2.43
CPNE1-216ENST00000437340 IQSEC3Q9UPP2 1182 aaPredicted RBP30.2■■■□□ 2.43
CPNE1-216ENST00000437340 ELP1O95163 1332 aa30.2■■■□□ 2.42
CPNE1-216ENST00000437340 FERMT3Q86UX7 667 aa30.2■■■□□ 2.42
CPNE1-216ENST00000437340 NLGN1Q8N2Q7 840 aa30.2■■■□□ 2.42
CPNE1-216ENST00000437340 LCORLQ8N3X6 602 aa30.2■■■□□ 2.42
CPNE1-216ENST00000437340 NAP1L2Q9ULW6 460 aaPredicted RBP30.2■■■□□ 2.42
CPNE1-216ENST00000437340 WTIPA6NIX2 430 aaPredicted RBP30.19■■■□□ 2.42
CPNE1-216ENST00000437340 CYP7A1P22680 504 aa30.19■■■□□ 2.42
CPNE1-216ENST00000437340 TMEM87BQ96K49 555 aa30.19■■■□□ 2.42
CPNE1-216ENST00000437340 RAI14Q9P0K7 980 aa30.19■■■□□ 2.42
CPNE1-216ENST00000437340 ABCF2Q9UG63 623 aa30.19■■■□□ 2.42
CPNE1-216ENST00000437340 SLC4A4Q9Y6R1 1079 aa30.19■■■□□ 2.42
CPNE1-216ENST00000437340 KLF18A0A0U1RQI7 1052 aa30.18■■■□□ 2.42
CPNE1-216ENST00000437340 TMED8Q6PL24 325 aaPredicted RBP30.18■■■□□ 2.42
CPNE1-216ENST00000437340 CCDC125Q86Z20 511 aa30.18■■■□□ 2.42
CPNE1-216ENST00000437340 KLHL34Q8N239 644 aa30.18■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms