RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, human

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-208	ENST00000436638	COL15A1	P39059	1388 aa		7.79	□□□□□ -1.16
ECHDC1-208	ENST00000436638	LAMB4	A4D0S4	1761 aa		7.79	□□□□□ -1.16
ECHDC1-208	ENST00000436638	CIC	Q96RK0	1608 aa	Predicted RBP	7.78	□□□□□ -1.16
ECHDC1-208	ENST00000436638	TAF1L	Q8IZX4	1826 aa		7.78	□□□□□ -1.16
ECHDC1-208	ENST00000436638	TIMP2	P16035	220 aa		7.78	□□□□□ -1.16
ECHDC1-208	ENST00000436638	NBPF10	Q6P3W6	841 aa	Known RBP	7.78	□□□□□ -1.16
ECHDC1-208	ENST00000436638	COPS6	Q7L5N1	327 aa		7.78	□□□□□ -1.16
ECHDC1-208	ENST00000436638	COL23A1	Q86Y22	540 aa	Predicted RBP	7.78	□□□□□ -1.16
ECHDC1-208	ENST00000436638	CCDC116	Q8IYX3	515 aa		7.78	□□□□□ -1.16
ECHDC1-208	ENST00000436638	NBPF15	Q8N660	670 aa		7.78	□□□□□ -1.16
ECHDC1-208	ENST00000436638	SLC16A10	Q8TF71	515 aa		7.78	□□□□□ -1.16
ECHDC1-208	ENST00000436638	XAGE3	Q8WTP9	111 aa		7.78	□□□□□ -1.16
ECHDC1-208	ENST00000436638	ITPKC	Q96DU7	683 aa		7.78	□□□□□ -1.16
ECHDC1-208	ENST00000436638	ZFAND3	Q9H8U3	227 aa		7.78	□□□□□ -1.16
ECHDC1-208	ENST00000436638	GMPR2	Q9P2T1	348 aa	Known RBP	7.78	□□□□□ -1.16
ECHDC1-208	ENST00000436638	COL5A3	P25940	1745 aa	Predicted RBP	7.78	□□□□□ -1.16
ECHDC1-208	ENST00000436638	PNPLA7	Q6ZV29	1317 aa		7.78	□□□□□ -1.16
ECHDC1-208	ENST00000436638	BMP1	P13497	986 aa		7.77	□□□□□ -1.17
ECHDC1-208	ENST00000436638	NR1H3	Q13133	447 aa		7.77	□□□□□ -1.17
ECHDC1-208	ENST00000436638	FKBP5	Q13451	457 aa	Predicted RBP	7.77	□□□□□ -1.17
ECHDC1-208	ENST00000436638	MCM6	Q14566	821 aa		7.77	□□□□□ -1.17
ECHDC1-208	ENST00000436638	PROSER3	Q2NL68	480 aa		7.77	□□□□□ -1.17
ECHDC1-208	ENST00000436638	NBPF20	Q3BBV1	942 aa		7.77	□□□□□ -1.17
ECHDC1-208	ENST00000436638	HSP90AB3P	Q58FF7	597 aa		7.77	□□□□□ -1.17
ECHDC1-208	ENST00000436638	USPL1	Q5W0Q7	1092 aa		7.77	□□□□□ -1.17
ECHDC1-208	ENST00000436638	SMIM5	Q71RC9	77 aa		7.77	□□□□□ -1.17
ECHDC1-208	ENST00000436638	CNPY4	Q8N129	248 aa		7.77	□□□□□ -1.17
ECHDC1-208	ENST00000436638	KLF16	Q9BXK1	252 aa	Predicted RBP	7.77	□□□□□ -1.17
ECHDC1-208	ENST00000436638	BCL2L13	Q9BXK5	485 aa		7.77	□□□□□ -1.17
ECHDC1-208	ENST00000436638	PHAX	Q9H814	394 aa	Known RBP	7.77	□□□□□ -1.17
ECHDC1-208	ENST00000436638	GDPD2	Q9HCC8	539 aa		7.77	□□□□□ -1.17
ECHDC1-208	ENST00000436638	NARF	Q9UHQ1	456 aa		7.77	□□□□□ -1.17
ECHDC1-208	ENST00000436638	MAP3K15	Q6ZN16	1313 aa		7.77	□□□□□ -1.17
ECHDC1-208	ENST00000436638	ERVV-1	B6SEH8	477 aa		7.76	□□□□□ -1.17
ECHDC1-208	ENST00000436638	NPHP1	O15259	732 aa		7.76	□□□□□ -1.17
ECHDC1-208	ENST00000436638	IPO8	O15397	1037 aa	Known RBP	7.76	□□□□□ -1.17
ECHDC1-208	ENST00000436638	DEK	P35659	375 aa	Known RBP	7.76	□□□□□ -1.17
ECHDC1-208	ENST00000436638	ABL2	P42684	1182 aa		7.76	□□□□□ -1.17
ECHDC1-208	ENST00000436638	RARS	P54136	660 aa	Known RBP	7.76	□□□□□ -1.17
ECHDC1-208	ENST00000436638	NEXN	Q0ZGT2	675 aa		7.76	□□□□□ -1.17
ECHDC1-208	ENST00000436638	FLII	Q13045	1269 aa		7.76	□□□□□ -1.17
ECHDC1-208	ENST00000436638	TTLL7	Q6ZT98	887 aa		7.76	□□□□□ -1.17
ECHDC1-208	ENST00000436638	NLGN1	Q8N2Q7	840 aa		7.76	□□□□□ -1.17
ECHDC1-208	ENST00000436638	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	7.76	□□□□□ -1.17
ECHDC1-208	ENST00000436638	PLBD2	Q8NHP8	589 aa		7.76	□□□□□ -1.17
ECHDC1-208	ENST00000436638	ZNF526	Q8TF50	670 aa	Predicted RBP	7.76	□□□□□ -1.17
ECHDC1-208	ENST00000436638	SSH1	Q8WYL5	1049 aa		7.76	□□□□□ -1.17
ECHDC1-208	ENST00000436638	C1orf115	Q9H7X2	142 aa		7.76	□□□□□ -1.17
ECHDC1-208	ENST00000436638	PRDM16	Q9HAZ2	1276 aa		7.76	□□□□□ -1.17
ECHDC1-208	ENST00000436638	SRP68	Q9UHB9	627 aa	Known RBP	7.76	□□□□□ -1.17
ECHDC1-208	ENST00000436638	RCAN3	Q9UKA8	241 aa		7.76	□□□□□ -1.17
ECHDC1-208	ENST00000436638	NAP1L2	Q9ULW6	460 aa	Predicted RBP	7.76	□□□□□ -1.17
ECHDC1-208	ENST00000436638	KIF16B	Q96L93	1317 aa		7.76	□□□□□ -1.17
ECHDC1-208	ENST00000436638	USP42	Q9H9J4	1324 aa	Known RBP	7.76	□□□□□ -1.17
ECHDC1-208	ENST00000436638	GPR37L1	O60883	481 aa		7.75	□□□□□ -1.17
ECHDC1-208	ENST00000436638	CAMTA2	O94983	1202 aa		7.75	□□□□□ -1.17
ECHDC1-208	ENST00000436638	MCC	P23508	829 aa		7.75	□□□□□ -1.17
ECHDC1-208	ENST00000436638	POLD1	P28340	1107 aa		7.75	□□□□□ -1.17
ECHDC1-208	ENST00000436638	DHX9	Q08211	1270 aa	Known RBP	7.75	□□□□□ -1.17
ECHDC1-208	ENST00000436638	INTS6L	Q5JSJ4	861 aa	Known RBP	7.75	□□□□□ -1.17
ECHDC1-208	ENST00000436638	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	7.75	□□□□□ -1.17
ECHDC1-208	ENST00000436638	MSL1	Q68DK7	614 aa		7.75	□□□□□ -1.17
ECHDC1-208	ENST00000436638	CLEC4G	Q6UXB4	293 aa		7.75	□□□□□ -1.17
ECHDC1-208	ENST00000436638	KSR2	Q6VAB6	950 aa		7.75	□□□□□ -1.17
ECHDC1-208	ENST00000436638	BICDL1	Q6ZP65	573 aa		7.75	□□□□□ -1.17
ECHDC1-208	ENST00000436638	AMIGO3	Q86WK7	504 aa		7.75	□□□□□ -1.17
ECHDC1-208	ENST00000436638	FRAT1	Q92837	279 aa	Predicted RBP	7.75	□□□□□ -1.17
ECHDC1-208	ENST00000436638	API5	Q9BZZ5	524 aa	Known RBP	7.75	□□□□□ -1.17
ECHDC1-208	ENST00000436638	MTFR1L	Q9H019	292 aa		7.75	□□□□□ -1.17
ECHDC1-208	ENST00000436638	PRDM10	Q9NQV6	1147 aa		7.75	□□□□□ -1.17
ECHDC1-208	ENST00000436638	PTPRC	P08575	1304 aa		7.75	□□□□□ -1.17
ECHDC1-208	ENST00000436638	MYH14	Q7Z406	1995 aa	Known RBP	7.74	□□□□□ -1.17
ECHDC1-208	ENST00000436638	PI4KAP2	A4QPH2	592 aa		7.74	□□□□□ -1.17
ECHDC1-208	ENST00000436638	BCAR3	O75815	825 aa		7.74	□□□□□ -1.17
ECHDC1-208	ENST00000436638	ZBTB7A	O95365	584 aa		7.74	□□□□□ -1.17
ECHDC1-208	ENST00000436638	GYS1	P13807	737 aa		7.74	□□□□□ -1.17
ECHDC1-208	ENST00000436638	GTF2E1	P29083	439 aa	Predicted RBP	7.74	□□□□□ -1.17
ECHDC1-208	ENST00000436638	G2E3	Q7L622	706 aa		7.74	□□□□□ -1.17
ECHDC1-208	ENST00000436638	LRP10	Q7Z4F1	713 aa		7.74	□□□□□ -1.17
ECHDC1-208	ENST00000436638	TRIM46	Q7Z4K8	759 aa		7.74	□□□□□ -1.17
ECHDC1-208	ENST00000436638	PI4KAP1	Q8N8J0	262 aa		7.74	□□□□□ -1.17
ECHDC1-208	ENST00000436638	IPO4	Q8TEX9	1081 aa	Known RBP	7.74	□□□□□ -1.17
ECHDC1-208	ENST00000436638	SETDB2	Q96T68	719 aa		7.74	□□□□□ -1.17
ECHDC1-208	ENST00000436638	SENP2	Q9HC62	589 aa		7.74	□□□□□ -1.17
ECHDC1-208	ENST00000436638	SPON1	Q9HCB6	807 aa		7.74	□□□□□ -1.17
ECHDC1-208	ENST00000436638	PGPEP1	Q9NXJ5	209 aa		7.74	□□□□□ -1.17
ECHDC1-208	ENST00000436638	NOB1	Q9ULX3	412 aa	Known RBP	7.74	□□□□□ -1.17
ECHDC1-208	ENST00000436638	MAP3K2	Q9Y2U5	619 aa		7.74	□□□□□ -1.17
ECHDC1-208	ENST00000436638	PARP3	Q9Y6F1	533 aa		7.74	□□□□□ -1.17
ECHDC1-208	ENST00000436638	UBR3	Q6ZT12	1888 aa		7.74	□□□□□ -1.17
ECHDC1-208	ENST00000436638	QSER1	Q2KHR3	1735 aa		7.73	□□□□□ -1.17
ECHDC1-208	ENST00000436638	PTMA	P06454	111 aa	Known RBP	7.73	□□□□□ -1.17
ECHDC1-208	ENST00000436638	TCIRG1	Q13488	830 aa		7.73	□□□□□ -1.17
ECHDC1-208	ENST00000436638	SCARF1	Q14162	830 aa		7.73	□□□□□ -1.17
ECHDC1-208	ENST00000436638	HLF	Q16534	295 aa		7.73	□□□□□ -1.17
ECHDC1-208	ENST00000436638	PARP10	Q53GL7	1025 aa		7.73	□□□□□ -1.17
ECHDC1-208	ENST00000436638	FOXD4L5	Q5VV16	416 aa	Predicted RBP	7.73	□□□□□ -1.17
ECHDC1-208	ENST00000436638	ZKSCAN2	Q63HK3	967 aa		7.73	□□□□□ -1.17
ECHDC1-208	ENST00000436638	TBC1D9B	Q66K14	1250 aa		7.73	□□□□□ -1.17
ECHDC1-208	ENST00000436638	MRPL14	Q6P1L8	145 aa	Known RBP	7.73	□□□□□ -1.17

Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms