RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-208ENST00000436638 COL15A1P39059 1388 aa7.79□□□□□ -1.16
ECHDC1-208ENST00000436638 LAMB4A4D0S4 1761 aa7.79□□□□□ -1.16
ECHDC1-208ENST00000436638 CICQ96RK0 1608 aaPredicted RBP7.78□□□□□ -1.16
ECHDC1-208ENST00000436638 TAF1LQ8IZX4 1826 aa7.78□□□□□ -1.16
ECHDC1-208ENST00000436638 TIMP2P16035 220 aa7.78□□□□□ -1.16
ECHDC1-208ENST00000436638 NBPF10Q6P3W6 841 aaKnown RBP7.78□□□□□ -1.16
ECHDC1-208ENST00000436638 COPS6Q7L5N1 327 aa7.78□□□□□ -1.16
ECHDC1-208ENST00000436638 COL23A1Q86Y22 540 aaPredicted RBP7.78□□□□□ -1.16
ECHDC1-208ENST00000436638 CCDC116Q8IYX3 515 aa7.78□□□□□ -1.16
ECHDC1-208ENST00000436638 NBPF15Q8N660 670 aa7.78□□□□□ -1.16
ECHDC1-208ENST00000436638 SLC16A10Q8TF71 515 aa7.78□□□□□ -1.16
ECHDC1-208ENST00000436638 XAGE3Q8WTP9 111 aa7.78□□□□□ -1.16
ECHDC1-208ENST00000436638 ITPKCQ96DU7 683 aa7.78□□□□□ -1.16
ECHDC1-208ENST00000436638 ZFAND3Q9H8U3 227 aa7.78□□□□□ -1.16
ECHDC1-208ENST00000436638 GMPR2Q9P2T1 348 aaKnown RBP7.78□□□□□ -1.16
ECHDC1-208ENST00000436638 COL5A3P25940 1745 aaPredicted RBP7.78□□□□□ -1.16
ECHDC1-208ENST00000436638 PNPLA7Q6ZV29 1317 aa7.78□□□□□ -1.16
ECHDC1-208ENST00000436638 BMP1P13497 986 aa7.77□□□□□ -1.17
ECHDC1-208ENST00000436638 NR1H3Q13133 447 aa7.77□□□□□ -1.17
ECHDC1-208ENST00000436638 FKBP5Q13451 457 aaPredicted RBP7.77□□□□□ -1.17
ECHDC1-208ENST00000436638 MCM6Q14566 821 aa7.77□□□□□ -1.17
ECHDC1-208ENST00000436638 PROSER3Q2NL68 480 aa7.77□□□□□ -1.17
ECHDC1-208ENST00000436638 NBPF20Q3BBV1 942 aa7.77□□□□□ -1.17
ECHDC1-208ENST00000436638 HSP90AB3PQ58FF7 597 aa7.77□□□□□ -1.17
ECHDC1-208ENST00000436638 USPL1Q5W0Q7 1092 aa7.77□□□□□ -1.17
ECHDC1-208ENST00000436638 SMIM5Q71RC9 77 aa7.77□□□□□ -1.17
ECHDC1-208ENST00000436638 CNPY4Q8N129 248 aa7.77□□□□□ -1.17
ECHDC1-208ENST00000436638 KLF16Q9BXK1 252 aaPredicted RBP7.77□□□□□ -1.17
ECHDC1-208ENST00000436638 BCL2L13Q9BXK5 485 aa7.77□□□□□ -1.17
ECHDC1-208ENST00000436638 PHAXQ9H814 394 aaKnown RBP7.77□□□□□ -1.17
ECHDC1-208ENST00000436638 GDPD2Q9HCC8 539 aa7.77□□□□□ -1.17
ECHDC1-208ENST00000436638 NARFQ9UHQ1 456 aa7.77□□□□□ -1.17
ECHDC1-208ENST00000436638 MAP3K15Q6ZN16 1313 aa7.77□□□□□ -1.17
ECHDC1-208ENST00000436638 ERVV-1B6SEH8 477 aa7.76□□□□□ -1.17
ECHDC1-208ENST00000436638 NPHP1O15259 732 aa7.76□□□□□ -1.17
ECHDC1-208ENST00000436638 IPO8O15397 1037 aaKnown RBP7.76□□□□□ -1.17
ECHDC1-208ENST00000436638 DEKP35659 375 aaKnown RBP7.76□□□□□ -1.17
ECHDC1-208ENST00000436638 ABL2P42684 1182 aa7.76□□□□□ -1.17
ECHDC1-208ENST00000436638 RARSP54136 660 aaKnown RBP7.76□□□□□ -1.17
ECHDC1-208ENST00000436638 NEXNQ0ZGT2 675 aa7.76□□□□□ -1.17
ECHDC1-208ENST00000436638 FLIIQ13045 1269 aa7.76□□□□□ -1.17
ECHDC1-208ENST00000436638 TTLL7Q6ZT98 887 aa7.76□□□□□ -1.17
ECHDC1-208ENST00000436638 NLGN1Q8N2Q7 840 aa7.76□□□□□ -1.17
ECHDC1-208ENST00000436638 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.76□□□□□ -1.17
ECHDC1-208ENST00000436638 PLBD2Q8NHP8 589 aa7.76□□□□□ -1.17
ECHDC1-208ENST00000436638 ZNF526Q8TF50 670 aaPredicted RBP7.76□□□□□ -1.17
ECHDC1-208ENST00000436638 SSH1Q8WYL5 1049 aa7.76□□□□□ -1.17
ECHDC1-208ENST00000436638 C1orf115Q9H7X2 142 aa7.76□□□□□ -1.17
ECHDC1-208ENST00000436638 PRDM16Q9HAZ2 1276 aa7.76□□□□□ -1.17
ECHDC1-208ENST00000436638 SRP68Q9UHB9 627 aaKnown RBP7.76□□□□□ -1.17
ECHDC1-208ENST00000436638 RCAN3Q9UKA8 241 aa7.76□□□□□ -1.17
ECHDC1-208ENST00000436638 NAP1L2Q9ULW6 460 aaPredicted RBP7.76□□□□□ -1.17
ECHDC1-208ENST00000436638 KIF16BQ96L93 1317 aa7.76□□□□□ -1.17
ECHDC1-208ENST00000436638 USP42Q9H9J4 1324 aaKnown RBP7.76□□□□□ -1.17
ECHDC1-208ENST00000436638 GPR37L1O60883 481 aa7.75□□□□□ -1.17
ECHDC1-208ENST00000436638 CAMTA2O94983 1202 aa7.75□□□□□ -1.17
ECHDC1-208ENST00000436638 MCCP23508 829 aa7.75□□□□□ -1.17
ECHDC1-208ENST00000436638 POLD1P28340 1107 aa7.75□□□□□ -1.17
ECHDC1-208ENST00000436638 DHX9Q08211 1270 aaKnown RBP7.75□□□□□ -1.17
ECHDC1-208ENST00000436638 INTS6LQ5JSJ4 861 aaKnown RBP7.75□□□□□ -1.17
ECHDC1-208ENST00000436638 PPP1R26Q5T8A7 1209 aaPredicted RBP7.75□□□□□ -1.17
ECHDC1-208ENST00000436638 MSL1Q68DK7 614 aa7.75□□□□□ -1.17
ECHDC1-208ENST00000436638 CLEC4GQ6UXB4 293 aa7.75□□□□□ -1.17
ECHDC1-208ENST00000436638 KSR2Q6VAB6 950 aa7.75□□□□□ -1.17
ECHDC1-208ENST00000436638 BICDL1Q6ZP65 573 aa7.75□□□□□ -1.17
ECHDC1-208ENST00000436638 AMIGO3Q86WK7 504 aa7.75□□□□□ -1.17
ECHDC1-208ENST00000436638 FRAT1Q92837 279 aaPredicted RBP7.75□□□□□ -1.17
ECHDC1-208ENST00000436638 API5Q9BZZ5 524 aaKnown RBP7.75□□□□□ -1.17
ECHDC1-208ENST00000436638 MTFR1LQ9H019 292 aa7.75□□□□□ -1.17
ECHDC1-208ENST00000436638 PRDM10Q9NQV6 1147 aa7.75□□□□□ -1.17
ECHDC1-208ENST00000436638 PTPRCP08575 1304 aa7.75□□□□□ -1.17
ECHDC1-208ENST00000436638 MYH14Q7Z406 1995 aaKnown RBP7.74□□□□□ -1.17
ECHDC1-208ENST00000436638 PI4KAP2A4QPH2 592 aa7.74□□□□□ -1.17
ECHDC1-208ENST00000436638 BCAR3O75815 825 aa7.74□□□□□ -1.17
ECHDC1-208ENST00000436638 ZBTB7AO95365 584 aa7.74□□□□□ -1.17
ECHDC1-208ENST00000436638 GYS1P13807 737 aa7.74□□□□□ -1.17
ECHDC1-208ENST00000436638 GTF2E1P29083 439 aaPredicted RBP7.74□□□□□ -1.17
ECHDC1-208ENST00000436638 G2E3Q7L622 706 aa7.74□□□□□ -1.17
ECHDC1-208ENST00000436638 LRP10Q7Z4F1 713 aa7.74□□□□□ -1.17
ECHDC1-208ENST00000436638 TRIM46Q7Z4K8 759 aa7.74□□□□□ -1.17
ECHDC1-208ENST00000436638 PI4KAP1Q8N8J0 262 aa7.74□□□□□ -1.17
ECHDC1-208ENST00000436638 IPO4Q8TEX9 1081 aaKnown RBP7.74□□□□□ -1.17
ECHDC1-208ENST00000436638 SETDB2Q96T68 719 aa7.74□□□□□ -1.17
ECHDC1-208ENST00000436638 SENP2Q9HC62 589 aa7.74□□□□□ -1.17
ECHDC1-208ENST00000436638 SPON1Q9HCB6 807 aa7.74□□□□□ -1.17
ECHDC1-208ENST00000436638 PGPEP1Q9NXJ5 209 aa7.74□□□□□ -1.17
ECHDC1-208ENST00000436638 NOB1Q9ULX3 412 aaKnown RBP7.74□□□□□ -1.17
ECHDC1-208ENST00000436638 MAP3K2Q9Y2U5 619 aa7.74□□□□□ -1.17
ECHDC1-208ENST00000436638 PARP3Q9Y6F1 533 aa7.74□□□□□ -1.17
ECHDC1-208ENST00000436638 UBR3Q6ZT12 1888 aa7.74□□□□□ -1.17
ECHDC1-208ENST00000436638 QSER1Q2KHR3 1735 aa7.73□□□□□ -1.17
ECHDC1-208ENST00000436638 PTMAP06454 111 aaKnown RBP7.73□□□□□ -1.17
ECHDC1-208ENST00000436638 TCIRG1Q13488 830 aa7.73□□□□□ -1.17
ECHDC1-208ENST00000436638 SCARF1Q14162 830 aa7.73□□□□□ -1.17
ECHDC1-208ENST00000436638 HLFQ16534 295 aa7.73□□□□□ -1.17
ECHDC1-208ENST00000436638 PARP10Q53GL7 1025 aa7.73□□□□□ -1.17
ECHDC1-208ENST00000436638 FOXD4L5Q5VV16 416 aaPredicted RBP7.73□□□□□ -1.17
ECHDC1-208ENST00000436638 ZKSCAN2Q63HK3 967 aa7.73□□□□□ -1.17
ECHDC1-208ENST00000436638 TBC1D9BQ66K14 1250 aa7.73□□□□□ -1.17
ECHDC1-208ENST00000436638 MRPL14Q6P1L8 145 aaKnown RBP7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms