RNA–Protein interactions for RNA: ENST00000434192.2

GTF2A1-202, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 1 (best) BASIC

Gene GTF2A1, Length 1,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-202ENST00000434192 IFNL2Q8IZJ0 200 aa8.91□□□□□ -0.98
GTF2A1-202ENST00000434192 CLUAP1Q96AJ1 413 aa8.91□□□□□ -0.98
GTF2A1-202ENST00000434192 GPAMQ9HCL2 828 aa8.91□□□□□ -0.98
GTF2A1-202ENST00000434192 IFT57Q9NWB7 429 aa8.91□□□□□ -0.98
GTF2A1-202ENST00000434192 H7C1W4 665 aa8.9□□□□□ -0.98
GTF2A1-202ENST00000434192 F11P03951 625 aa8.9□□□□□ -0.98
GTF2A1-202ENST00000434192 INHAP05111 366 aa8.9□□□□□ -0.98
GTF2A1-202ENST00000434192 HSP90AB1P08238 724 aaKnown RBP8.9□□□□□ -0.98
GTF2A1-202ENST00000434192 GNAI1P63096 354 aa8.9□□□□□ -0.98
GTF2A1-202ENST00000434192 DCTN1Q14203 1278 aa8.9□□□□□ -0.98
GTF2A1-202ENST00000434192 DDB1Q16531 1140 aa8.9□□□□□ -0.98
GTF2A1-202ENST00000434192 EML3Q32P44 896 aa8.9□□□□□ -0.98
GTF2A1-202ENST00000434192 C4orf17Q53FE4 359 aa8.9□□□□□ -0.98
GTF2A1-202ENST00000434192 DUSP27Q5VZP5 1158 aa8.9□□□□□ -0.98
GTF2A1-202ENST00000434192 DEPDC4Q8N2C3 294 aa8.9□□□□□ -0.98
GTF2A1-202ENST00000434192 ZCRB1Q8TBF4 217 aaKnown RBP8.9□□□□□ -0.98
GTF2A1-202ENST00000434192 ADAMTS19Q8TE59 1207 aa8.9□□□□□ -0.98
GTF2A1-202ENST00000434192 GTPBP3Q969Y2 492 aaKnown RBP8.9□□□□□ -0.98
GTF2A1-202ENST00000434192 THUMPD2Q9BTF0 503 aaKnown RBP8.9□□□□□ -0.98
GTF2A1-202ENST00000434192 SERTAD1Q9UHV2 236 aa8.9□□□□□ -0.98
GTF2A1-202ENST00000434192 CACNA1FO60840 1977 aa8.9□□□□□ -0.99
GTF2A1-202ENST00000434192 TEFQ10587 303 aa8.89□□□□□ -0.99
GTF2A1-202ENST00000434192 GAS6Q14393 721 aa8.89□□□□□ -0.99
GTF2A1-202ENST00000434192 HDGFL1Q5TGJ6 251 aa8.89□□□□□ -0.99
GTF2A1-202ENST00000434192 FOXR1Q6PIV2 292 aa8.89□□□□□ -0.99
GTF2A1-202ENST00000434192 GMCL1Q96IK5 515 aa8.89□□□□□ -0.99
GTF2A1-202ENST00000434192 CICQ96RK0 1608 aaPredicted RBP8.88□□□□□ -0.99
GTF2A1-202ENST00000434192 UBR3Q6ZT12 1888 aa8.88□□□□□ -0.99
GTF2A1-202ENST00000434192 CYP27B1O15528 508 aa8.88□□□□□ -0.99
GTF2A1-202ENST00000434192 TRIM37O94972 964 aa8.88□□□□□ -0.99
GTF2A1-202ENST00000434192 NCOA4Q13772 614 aa8.88□□□□□ -0.99
GTF2A1-202ENST00000434192 TRMT2AQ8IZ69 625 aaKnown RBP8.88□□□□□ -0.99
GTF2A1-202ENST00000434192 WHAMMQ8TF30 809 aa8.88□□□□□ -0.99
GTF2A1-202ENST00000434192 TSR2Q969E8 191 aaKnown RBP8.88□□□□□ -0.99
GTF2A1-202ENST00000434192 DCAF5Q96JK2 942 aa8.88□□□□□ -0.99
GTF2A1-202ENST00000434192 NUCKS1Q9H1E3 243 aaKnown RBP8.88□□□□□ -0.99
GTF2A1-202ENST00000434192 NOD1Q9Y239 953 aa8.88□□□□□ -0.99
GTF2A1-202ENST00000434192 LAS1LQ9Y4W2 734 aaKnown RBP8.88□□□□□ -0.99
GTF2A1-202ENST00000434192 N4BP2Q86UW6 1770 aaPredicted RBP8.87□□□□□ -0.99
GTF2A1-202ENST00000434192 RNMTO43148 476 aaKnown RBP8.87□□□□□ -0.99
GTF2A1-202ENST00000434192 MPRIPQ6WCQ1 1025 aa8.87□□□□□ -0.99
GTF2A1-202ENST00000434192 SVOPQ8N4V2 548 aa8.87□□□□□ -0.99
GTF2A1-202ENST00000434192 RHBDD1Q8TEB9 315 aa8.87□□□□□ -0.99
GTF2A1-202ENST00000434192 TSPYL4Q9UJ04 414 aa8.87□□□□□ -0.99
GTF2A1-202ENST00000434192 PCDHGA11Q9Y5H2 935 aa8.87□□□□□ -0.99
GTF2A1-202ENST00000434192 COL5A3P25940 1745 aaPredicted RBP8.87□□□□□ -0.99
GTF2A1-202ENST00000434192 ZNF831Q5JPB2 1677 aa8.87□□□□□ -0.99
GTF2A1-202ENST00000434192 CHD4Q14839 1912 aa8.86□□□□□ -0.99
GTF2A1-202ENST00000434192 A0A1B0GTH6 734 aa8.86□□□□□ -0.99
GTF2A1-202ENST00000434192 USP17L5A8MUK1 530 aa8.86□□□□□ -0.99
GTF2A1-202ENST00000434192 TMEM229AB2RXF0 380 aa8.86□□□□□ -0.99
GTF2A1-202ENST00000434192 EXOC5O00471 708 aa8.86□□□□□ -0.99
GTF2A1-202ENST00000434192 ZNF853P0CG23 659 aa8.86□□□□□ -0.99
GTF2A1-202ENST00000434192 SLURP2P0DP57 97 aa8.86□□□□□ -0.99
GTF2A1-202ENST00000434192 GTF2IP78347 998 aa8.86□□□□□ -0.99
GTF2A1-202ENST00000434192 ZNF385CQ66K41 422 aaPredicted RBP8.86□□□□□ -0.99
GTF2A1-202ENST00000434192 MARCH10Q8NA82 808 aaPredicted RBP8.86□□□□□ -0.99
GTF2A1-202ENST00000434192 NFATC2IPQ8NCF5 419 aa8.86□□□□□ -0.99
GTF2A1-202ENST00000434192 IL17REQ8NFR9 667 aa8.86□□□□□ -0.99
GTF2A1-202ENST00000434192 DDX54Q8TDD1 881 aaKnown RBP8.86□□□□□ -0.99
GTF2A1-202ENST00000434192 TRERF1Q96PN7 1200 aa8.86□□□□□ -0.99
GTF2A1-202ENST00000434192 RUBCNLQ9H714 662 aa8.86□□□□□ -0.99
GTF2A1-202ENST00000434192 MBIPQ9NS73 344 aa8.86□□□□□ -0.99
GTF2A1-202ENST00000434192 BABAM1Q9NWV8 329 aa8.86□□□□□ -0.99
GTF2A1-202ENST00000434192 TJP1Q07157 1748 aa8.85□□□□□ -0.99
GTF2A1-202ENST00000434192 KCPQ6ZWJ8 1503 aa8.85□□□□□ -0.99
GTF2A1-202ENST00000434192 CT47B1P0C2W7 299 aaPredicted RBP8.85□□□□□ -0.99
GTF2A1-202ENST00000434192 MSX1P28360 303 aa8.85□□□□□ -0.99
GTF2A1-202ENST00000434192 PLA2G4AP47712 749 aa8.85□□□□□ -0.99
GTF2A1-202ENST00000434192 SMTNP53814 917 aa8.85□□□□□ -0.99
GTF2A1-202ENST00000434192 TAF7Q15545 349 aaPredicted RBP8.85□□□□□ -0.99
GTF2A1-202ENST00000434192 EZH2Q15910 746 aaKnown RBP8.85□□□□□ -0.99
GTF2A1-202ENST00000434192 TBC1D9Q6ZT07 1266 aa8.85□□□□□ -0.99
GTF2A1-202ENST00000434192 CAMKK2Q96RR4 588 aa8.85□□□□□ -0.99
GTF2A1-202ENST00000434192 SLC52A2Q9HAB3 445 aa8.85□□□□□ -0.99
GTF2A1-202ENST00000434192 LGR6Q9HBX8 967 aa8.85□□□□□ -0.99
GTF2A1-202ENST00000434192 RCAN3Q9UKA8 241 aa8.85□□□□□ -0.99
GTF2A1-202ENST00000434192 CHL1O00533 1208 aa8.84□□□□□ -0.99
GTF2A1-202ENST00000434192 APBA3O96018 575 aa8.84□□□□□ -0.99
GTF2A1-202ENST00000434192 THBS1P07996 1170 aa8.84□□□□□ -0.99
GTF2A1-202ENST00000434192 SRSF11Q05519 484 aaKnown RBP8.84□□□□□ -0.99
GTF2A1-202ENST00000434192 EXOSC9Q06265 439 aaKnown RBP8.84□□□□□ -0.99
GTF2A1-202ENST00000434192 UCN2Q96RP3 112 aa8.84□□□□□ -0.99
GTF2A1-202ENST00000434192 SOS1Q07889 1333 aaPredicted RBP8.83□□□□□ -1
GTF2A1-202ENST00000434192 BTBD11A6QL63 1104 aa8.83□□□□□ -1
GTF2A1-202ENST00000434192 ERVV-2B6SEH9 535 aa8.83□□□□□ -1
GTF2A1-202ENST00000434192 LZTS3O60299 673 aaPredicted RBP8.83□□□□□ -1
GTF2A1-202ENST00000434192 CABP4P57796 275 aa8.83□□□□□ -1
GTF2A1-202ENST00000434192 PGBD3Q8N328 593 aa8.83□□□□□ -1
GTF2A1-202ENST00000434192 ZNF428Q96B54 188 aa8.83□□□□□ -1
GTF2A1-202ENST00000434192 AIDAQ96BJ3 306 aa8.83□□□□□ -1
GTF2A1-202ENST00000434192 A6NJY4 79 aa8.82□□□□□ -1
GTF2A1-202ENST00000434192 PLSCR1O15162 318 aa8.82□□□□□ -1
GTF2A1-202ENST00000434192 TWISTNBQ3B726 338 aaPredicted RBP8.82□□□□□ -1
GTF2A1-202ENST00000434192 LYPD4Q6UWN0 246 aa8.82□□□□□ -1
GTF2A1-202ENST00000434192 TTC5Q8N0Z6 440 aa8.82□□□□□ -1
GTF2A1-202ENST00000434192 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.82□□□□□ -1
GTF2A1-202ENST00000434192 NIFKQ9BYG3 293 aaKnown RBP8.82□□□□□ -1
GTF2A1-202ENST00000434192 TMOD3Q9NYL9 352 aa8.82□□□□□ -1
GTF2A1-202ENST00000434192 USP3Q9Y6I4 520 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms