RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 ALDH8A1Q9H2A2 487 aaPredicted RBP9.45□□□□□ -0.9
VTI1A-202ENST00000432306 JADE2Q9NQC1 790 aa9.45□□□□□ -0.9
VTI1A-202ENST00000432306 COMMD10Q9Y6G5 202 aa9.45□□□□□ -0.9
VTI1A-202ENST00000432306 PAPPAQ13219 1627 aa9.45□□□□□ -0.9
VTI1A-202ENST00000432306 TTC21BQ7Z4L5 1316 aa9.45□□□□□ -0.9
VTI1A-202ENST00000432306 TTC21AQ8NDW8 1320 aa9.45□□□□□ -0.9
VTI1A-202ENST00000432306 COL24A1Q17RW2 1714 aa9.45□□□□□ -0.9
VTI1A-202ENST00000432306 SLFN14P0C7P3 912 aa9.45□□□□□ -0.9
VTI1A-202ENST00000432306 AK2P54819 239 aa9.45□□□□□ -0.9
VTI1A-202ENST00000432306 DCTN1Q14203 1278 aa9.45□□□□□ -0.9
VTI1A-202ENST00000432306 CCDC144BQ3MJ40 725 aa9.45□□□□□ -0.9
VTI1A-202ENST00000432306 REPIN1Q9BWE0 567 aaKnown RBP9.45□□□□□ -0.9
VTI1A-202ENST00000432306 IL25Q9H293 177 aa9.45□□□□□ -0.9
VTI1A-202ENST00000432306 DDX19AQ9NUU7 478 aaKnown RBP9.45□□□□□ -0.9
VTI1A-202ENST00000432306 HYPKQ9NX55 129 aa9.45□□□□□ -0.9
VTI1A-202ENST00000432306 SMC3Q9UQE7 1217 aa9.45□□□□□ -0.9
VTI1A-202ENST00000432306 MRVI1Q9Y6F6 885 aa9.45□□□□□ -0.9
VTI1A-202ENST00000432306 BTAF1O14981 1849 aa9.44□□□□□ -0.9
VTI1A-202ENST00000432306 ANKRD33BA6NCL7 494 aa9.44□□□□□ -0.9
VTI1A-202ENST00000432306 POLD1P28340 1107 aa9.44□□□□□ -0.9
VTI1A-202ENST00000432306 EIF4A2Q14240 407 aaKnown RBP9.44□□□□□ -0.9
VTI1A-202ENST00000432306 MAP3K11Q16584 847 aa9.44□□□□□ -0.9
VTI1A-202ENST00000432306 MAMSTRQ6ZN01 415 aa9.44□□□□□ -0.9
VTI1A-202ENST00000432306 NME9Q86XW9 330 aa9.44□□□□□ -0.9
VTI1A-202ENST00000432306 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.44□□□□□ -0.94e-7■■□□□ 14
VTI1A-202ENST00000432306 SLC16A10Q8TF71 515 aa9.44□□□□□ -0.9
VTI1A-202ENST00000432306 ZSWIM6Q9HCJ5 1215 aa9.44□□□□□ -0.9
VTI1A-202ENST00000432306 SCUBE2Q9NQ36 999 aa9.44□□□□□ -0.9
VTI1A-202ENST00000432306 EXOC6BQ9Y2D4 811 aa9.44□□□□□ -0.9
VTI1A-202ENST00000432306 FAM208AQ9UK61 1670 aaKnown RBP9.44□□□□□ -0.9
VTI1A-202ENST00000432306 PNMA6EA0A0J9YXQ4 647 aa9.43□□□□□ -0.9
VTI1A-202ENST00000432306 FBLN1P23142 703 aa9.43□□□□□ -0.9
VTI1A-202ENST00000432306 RINLQ6ZS11 566 aa9.43□□□□□ -0.9
VTI1A-202ENST00000432306 KIF18AQ8NI77 898 aa9.43□□□□□ -0.9
VTI1A-202ENST00000432306 ADAMTS19Q8TE59 1207 aa9.43□□□□□ -0.9
VTI1A-202ENST00000432306 PIK3R5Q8WYR1 880 aa9.43□□□□□ -0.9
VTI1A-202ENST00000432306 CARD10Q9BWT7 1032 aa9.43□□□□□ -0.9
VTI1A-202ENST00000432306 POLR3EQ9NVU0 708 aa9.43□□□□□ -0.9
VTI1A-202ENST00000432306 GABBR1Q9UBS5 961 aa9.43□□□□□ -0.9
VTI1A-202ENST00000432306 NAP1L2Q9ULW6 460 aaPredicted RBP9.43□□□□□ -0.9
VTI1A-202ENST00000432306 TTC41PQ6P2S7 1318 aa9.43□□□□□ -0.9
VTI1A-202ENST00000432306 GRIN3BO60391 1043 aa9.42□□□□□ -0.9
VTI1A-202ENST00000432306 CALRP27797 417 aaKnown RBP9.42□□□□□ -0.9
VTI1A-202ENST00000432306 ZNF75DP51815 510 aa9.42□□□□□ -0.9
VTI1A-202ENST00000432306 KRT85P78386 507 aa9.42□□□□□ -0.9
VTI1A-202ENST00000432306 TYRO3Q06418 890 aa9.42□□□□□ -0.9
VTI1A-202ENST00000432306 TERF2Q15554 542 aa9.42□□□□□ -0.9
VTI1A-202ENST00000432306 TNS2Q63HR2 1409 aa9.42□□□□□ -0.9
VTI1A-202ENST00000432306 ZSCAN25Q6NSZ9 544 aa9.42□□□□□ -0.9
VTI1A-202ENST00000432306 NYAP1Q6ZVC0 841 aa9.42□□□□□ -0.9
VTI1A-202ENST00000432306 CACTIN-AS1Q8N1I8 211 aa9.42□□□□□ -0.9
VTI1A-202ENST00000432306 ZNF454Q8N9F8 522 aa9.42□□□□□ -0.9
VTI1A-202ENST00000432306 ZNF397Q8NF99 534 aaPredicted RBP9.42□□□□□ -0.9
VTI1A-202ENST00000432306 SCAND2PQ9GZW5 306 aaPredicted RBP9.42□□□□□ -0.9
VTI1A-202ENST00000432306 NUP62CLQ9H1M0 184 aa9.42□□□□□ -0.9
VTI1A-202ENST00000432306 KCNG1Q9UIX4 513 aa9.42□□□□□ -0.9
VTI1A-202ENST00000432306 CCDC66A2RUB6 948 aa9.42□□□□□ -0.9
VTI1A-202ENST00000432306 TRIM6-TRIM34B2RNG4 842 aa9.42□□□□□ -0.9
VTI1A-202ENST00000432306 FIBPO43427 364 aa9.42□□□□□ -0.9
VTI1A-202ENST00000432306 TUBB4AP04350 444 aa9.42□□□□□ -0.9
VTI1A-202ENST00000432306 PDCP20941 246 aa9.42□□□□□ -0.9
VTI1A-202ENST00000432306 PTGS1P23219 599 aa9.42□□□□□ -0.9
VTI1A-202ENST00000432306 GJB2P29033 226 aa9.42□□□□□ -0.9
VTI1A-202ENST00000432306 DNM1Q05193 864 aaKnown RBP9.42□□□□□ -0.9
VTI1A-202ENST00000432306 TSNAXIP1Q2TAA8 658 aa9.42□□□□□ -0.9
VTI1A-202ENST00000432306 RNF20Q5VTR2 975 aa9.42□□□□□ -0.9
VTI1A-202ENST00000432306 G2E3Q7L622 706 aa9.42□□□□□ -0.9
VTI1A-202ENST00000432306 CNTROBQ8N137 903 aa9.42□□□□□ -0.9
VTI1A-202ENST00000432306 KRT222Q8N1A0 295 aa9.42□□□□□ -0.9
VTI1A-202ENST00000432306 NLGN1Q8N2Q7 840 aa9.42□□□□□ -0.9
VTI1A-202ENST00000432306 RILPL2Q969X0 211 aa9.42□□□□□ -0.9
VTI1A-202ENST00000432306 MRFAP1L1Q96HT8 127 aa9.42□□□□□ -0.9
VTI1A-202ENST00000432306 GNL3LQ9NVN8 582 aaKnown RBP9.42□□□□□ -0.9
VTI1A-202ENST00000432306 PIK3C2AO00443 1686 aa9.41□□□□□ -0.9
VTI1A-202ENST00000432306 USP6P35125 1406 aa9.41□□□□□ -0.9
VTI1A-202ENST00000432306 KIF2AO00139 706 aaPredicted RBP9.41□□□□□ -0.9
VTI1A-202ENST00000432306 TNNT1P13805 278 aa9.41□□□□□ -0.9
VTI1A-202ENST00000432306 KCNJ6P48051 423 aa9.41□□□□□ -0.9
VTI1A-202ENST00000432306 ST3GAL1Q11201 340 aa9.41□□□□□ -0.9
VTI1A-202ENST00000432306 CCDC30Q5VVM6 783 aa9.41□□□□□ -0.9
VTI1A-202ENST00000432306 SULT6B1Q6IMI4 303 aa9.41□□□□□ -0.9
VTI1A-202ENST00000432306 CCDC186Q7Z3E2 898 aa9.41□□□□□ -0.9
VTI1A-202ENST00000432306 TTC6Q86TZ1 520 aa9.41□□□□□ -0.9
VTI1A-202ENST00000432306 CCDC112Q8NEF3 446 aa9.41□□□□□ -0.9
VTI1A-202ENST00000432306 IPO4Q8TEX9 1081 aaKnown RBP9.41□□□□□ -0.9
VTI1A-202ENST00000432306 ZDHHC16Q969W1 377 aa9.41□□□□□ -0.9
VTI1A-202ENST00000432306 ARMC5Q96C12 935 aa9.41□□□□□ -0.9
VTI1A-202ENST00000432306 KIF1BPQ96EK5 621 aa9.41□□□□□ -0.9
VTI1A-202ENST00000432306 ADAM33Q9BZ11 813 aa9.41□□□□□ -0.9
VTI1A-202ENST00000432306 CLSTN2Q9H4D0 955 aa9.41□□□□□ -0.9
VTI1A-202ENST00000432306 ABCC6O95255 1503 aa9.41□□□□□ -0.9
VTI1A-202ENST00000432306 SOWAHDA6NJG2 315 aa9.4□□□□□ -0.9
VTI1A-202ENST00000432306 LMOD1P29536 600 aaPredicted RBP9.4□□□□□ -0.9
VTI1A-202ENST00000432306 MTX1Q13505 466 aa9.4□□□□□ -0.9
VTI1A-202ENST00000432306 NECTIN1Q15223 517 aa9.4□□□□□ -0.9
VTI1A-202ENST00000432306 C6orf132Q5T0Z8 1188 aa9.4□□□□□ -0.9
VTI1A-202ENST00000432306 MCM10Q7L590 875 aa9.4□□□□□ -0.9
VTI1A-202ENST00000432306 KCNH5Q8NCM2 988 aa9.4□□□□□ -0.9
VTI1A-202ENST00000432306 ERO1AQ96HE7 468 aa9.4□□□□□ -0.9
VTI1A-202ENST00000432306 CCDC85AQ96PX6 553 aaPredicted RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms