RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 STAT6P42226 847 aa13.21□□□□□ -0.29
PTCH1-208ENST00000430669 SPTLC2O15270 562 aa13.21□□□□□ -0.29
PTCH1-208ENST00000430669 FILIP1Q7Z7B0 1213 aa13.21□□□□□ -0.29
PTCH1-208ENST00000430669 CETN1Q12798 172 aa13.21□□□□□ -0.29
PTCH1-208ENST00000430669 EXOC1Q9NV70 894 aa13.21□□□□□ -0.29
PTCH1-208ENST00000430669 SNX14Q9Y5W7 946 aa13.21□□□□□ -0.29
PTCH1-208ENST00000430669 STK24Q9Y6E0 443 aa13.21□□□□□ -0.29
PTCH1-208ENST00000430669 TTLL5Q6EMB2 1281 aa13.21□□□□□ -0.3
PTCH1-208ENST00000430669 SLIT1O75093 1534 aa13.21□□□□□ -0.3
PTCH1-208ENST00000430669 FAM208AQ9UK61 1670 aaKnown RBP13.21□□□□□ -0.3
PTCH1-208ENST00000430669 TBC1D22AQ8WUA7 517 aa13.21□□□□□ -0.3
PTCH1-208ENST00000430669 TFIP11Q9UBB9 837 aaKnown RBP13.21□□□□□ -0.3
PTCH1-208ENST00000430669 PTPDC1A2A3K4 754 aa13.2□□□□□ -0.3
PTCH1-208ENST00000430669 GOLGA6L10A6NI86 522 aa13.2□□□□□ -0.3
PTCH1-208ENST00000430669 GPAA1O43292 621 aa13.2□□□□□ -0.3
PTCH1-208ENST00000430669 WDHD1O75717 1129 aaPredicted RBP13.2□□□□□ -0.3
PTCH1-208ENST00000430669 CASQ1P31415 396 aa13.2□□□□□ -0.3
PTCH1-208ENST00000430669 IL6STP40189 918 aaPredicted RBP13.2□□□□□ -0.3
PTCH1-208ENST00000430669 COPRSQ9NQ92 184 aa13.2□□□□□ -0.3
PTCH1-208ENST00000430669 TRIM75PA6NK02 468 aa13.2□□□□□ -0.3
PTCH1-208ENST00000430669 YEATS4O95619 227 aa13.2□□□□□ -0.3
PTCH1-208ENST00000430669 PRIM1P49642 420 aaKnown RBP13.2□□□□□ -0.3
PTCH1-208ENST00000430669 DNM1Q05193 864 aaKnown RBP13.2□□□□□ -0.3
PTCH1-208ENST00000430669 VSIG10Q8N0Z9 540 aa13.2□□□□□ -0.3
PTCH1-208ENST00000430669 EHBP1Q8NDI1 1231 aa13.2□□□□□ -0.3
PTCH1-208ENST00000430669 LARP6Q9BRS8 491 aaKnown RBP13.2□□□□□ -0.3
PTCH1-208ENST00000430669 MCM9Q9NXL9 1143 aa13.2□□□□□ -0.3
PTCH1-208ENST00000430669 CCDC82Q8N4S0 544 aa13.2□□□□□ -0.3
PTCH1-208ENST00000430669 SPATA5Q8NB90 893 aa13.2□□□□□ -0.3
PTCH1-208ENST00000430669 C6orf50Q9HD87 102 aa13.2□□□□□ -0.3
PTCH1-208ENST00000430669 FLAD1Q8NFF5 587 aa13.2□□□□□ -0.3
PTCH1-208ENST00000430669 GBP3Q9H0R5 595 aa13.2□□□□□ -0.3
PTCH1-208ENST00000430669 SPATA31A3Q5VYP0 1347 aa13.2□□□□□ -0.3
PTCH1-208ENST00000430669 CHD2O14647 1828 aaKnown RBP13.2□□□□□ -0.3
PTCH1-208ENST00000430669 ELP1O95163 1332 aa13.2□□□□□ -0.3
PTCH1-208ENST00000430669 DEXIO95424 95 aa13.19□□□□□ -0.3
PTCH1-208ENST00000430669 FEZ1Q99689 392 aa13.19□□□□□ -0.3
PTCH1-208ENST00000430669 PAXBP1Q9Y5B6 917 aa13.19□□□□□ -0.3
PTCH1-208ENST00000430669 SPAG1Q07617 926 aa13.19□□□□□ -0.3
PTCH1-208ENST00000430669 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.19□□□□□ -0.3
PTCH1-208ENST00000430669 DCCP43146 1447 aa13.19□□□□□ -0.3
PTCH1-208ENST00000430669 UQCRHLA0A096LP55 91 aa13.19□□□□□ -0.3
PTCH1-208ENST00000430669 A1BGP04217 495 aa13.19□□□□□ -0.3
PTCH1-208ENST00000430669 UQCRHP07919 91 aa13.19□□□□□ -0.3
PTCH1-208ENST00000430669 HIBADHP31937 336 aaKnown RBP13.19□□□□□ -0.3
PTCH1-208ENST00000430669 PPP1R2P41236 205 aa13.19□□□□□ -0.3
PTCH1-208ENST00000430669 TNNT3P45378 269 aaPredicted RBP13.19□□□□□ -0.3
PTCH1-208ENST00000430669 GDPD2Q9HCC8 539 aa13.19□□□□□ -0.3
PTCH1-208ENST00000430669 TFCP2L1Q9NZI6 479 aa13.19□□□□□ -0.3
PTCH1-208ENST00000430669 APOBRQ0VD83 1088 aa13.19□□□□□ -0.3
PTCH1-208ENST00000430669 MAP9Q49MG5 647 aa13.19□□□□□ -0.3
PTCH1-208ENST00000430669 JAKMIP3Q5VZ66 844 aa13.19□□□□□ -0.3
PTCH1-208ENST00000430669 NUP88Q99567 741 aaPredicted RBP13.19□□□□□ -0.3
PTCH1-208ENST00000430669 KLHL10Q6JEL2 608 aa13.19□□□□□ -0.3
PTCH1-208ENST00000430669 USP21Q9UK80 565 aa13.19□□□□□ -0.3
PTCH1-208ENST00000430669 ERVV-1B6SEH8 477 aa13.18□□□□□ -0.3
PTCH1-208ENST00000430669 ALDH1B1P30837 517 aa13.18□□□□□ -0.3
PTCH1-208ENST00000430669 ANO6Q4KMQ2 910 aa13.18□□□□□ -0.3
PTCH1-208ENST00000430669 USP25Q9UHP3 1055 aa13.18□□□□□ -0.3
PTCH1-208ENST00000430669 GGA1Q9UJY5 639 aa13.18□□□□□ -0.3
PTCH1-208ENST00000430669 USO1O60763 962 aaKnown RBP13.18□□□□□ -0.3
PTCH1-208ENST00000430669 RILPL1Q5EBL4 403 aa13.18□□□□□ -0.3
PTCH1-208ENST00000430669 CACNA2D4Q7Z3S7 1137 aa13.18□□□□□ -0.3
PTCH1-208ENST00000430669 MBD4O95243 580 aa13.18□□□□□ -0.3
PTCH1-208ENST00000430669 TMED8Q6PL24 325 aaPredicted RBP13.18□□□□□ -0.3
PTCH1-208ENST00000430669 TTC6Q86TZ1 520 aa13.18□□□□□ -0.3
PTCH1-208ENST00000430669 DDX17Q92841 729 aaKnown RBP13.18□□□□□ -0.3
PTCH1-208ENST00000430669 GSPT1P15170 499 aaKnown RBP13.18□□□□□ -0.3
PTCH1-208ENST00000430669 HEATR3Q7Z4Q2 680 aa13.18□□□□□ -0.3
PTCH1-208ENST00000430669 NCOA3Q9Y6Q9 1424 aa13.17□□□□□ -0.3
PTCH1-208ENST00000430669 OTUD7AQ8TE49 926 aaPredicted RBP13.17□□□□□ -0.3
PTCH1-208ENST00000430669 DBNDD2Q9BQY9 259 aa13.17□□□□□ -0.3
PTCH1-208ENST00000430669 MED23Q9ULK4 1368 aa13.17□□□□□ -0.3
PTCH1-208ENST00000430669 TIMM10P62072 90 aa13.17□□□□□ -0.3
PTCH1-208ENST00000430669 TUBB4BP68371 445 aa13.17□□□□□ -0.3
PTCH1-208ENST00000430669 ZFYVE27Q5T4F4 411 aa13.17□□□□□ -0.3
PTCH1-208ENST00000430669 LRRC2Q9BYS8 371 aa13.17□□□□□ -0.3
PTCH1-208ENST00000430669 CCDC172P0C7W6 258 aa13.17□□□□□ -0.3
PTCH1-208ENST00000430669 NT5C2P49902 561 aa13.17□□□□□ -0.3
PTCH1-208ENST00000430669 NAPAP54920 295 aa13.17□□□□□ -0.3
PTCH1-208ENST00000430669 SYT1P21579 422 aa13.17□□□□□ -0.3
PTCH1-208ENST00000430669 SH2D4AQ9H788 454 aa13.17□□□□□ -0.3
PTCH1-208ENST00000430669 BICDL2A1A5D9 508 aa13.17□□□□□ -0.3
PTCH1-208ENST00000430669 POTEB2H3BUK9 544 aa13.17□□□□□ -0.3
PTCH1-208ENST00000430669 FMNL3Q8IVF7 1028 aa13.17□□□□□ -0.3
PTCH1-208ENST00000430669 RFX7Q2KHR2 1363 aa13.17□□□□□ -0.3
PTCH1-208ENST00000430669 SUPT20HQ8NEM7 779 aa13.16□□□□□ -0.3
PTCH1-208ENST00000430669 MYH6P13533 1939 aa13.16□□□□□ -0.3
PTCH1-208ENST00000430669 ADAMTS13Q76LX8 1427 aa13.16□□□□□ -0.3
PTCH1-208ENST00000430669 TYRO3Q06418 890 aa13.16□□□□□ -0.3
PTCH1-208ENST00000430669 ZNF274Q96GC6 653 aaPredicted RBP13.16□□□□□ -0.3
PTCH1-208ENST00000430669 SEMA3EO15041 775 aa13.16□□□□□ -0.3
PTCH1-208ENST00000430669 MATR3P43243 847 aaKnown RBP eCLIP13.16□□□□□ -0.3
PTCH1-208ENST00000430669 DNAJC10Q8IXB1 793 aa13.16□□□□□ -0.3
PTCH1-208ENST00000430669 FAM227BQ96M60 508 aa13.16□□□□□ -0.3
PTCH1-208ENST00000430669 PARP1P09874 1014 aaKnown RBP13.16□□□□□ -0.3
PTCH1-208ENST00000430669 TNNI2P48788 182 aa13.16□□□□□ -0.3
PTCH1-208ENST00000430669 PRIMPOLQ96LW4 560 aa13.16□□□□□ -0.3
PTCH1-208ENST00000430669 PDCL3Q9H2J4 239 aa13.16□□□□□ -0.3
PTCH1-208ENST00000430669 PARP4Q9UKK3 1724 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms