RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 VEZTQ9HBM0 779 aa15.83■□□□□ 0.12
GPC1-204ENST00000426280 SERPINA10Q9UK55 444 aa15.83■□□□□ 0.12
GPC1-204ENST00000426280 PRDX5P30044 214 aa15.82■□□□□ 0.12
GPC1-204ENST00000426280 RASA3Q14644 834 aa15.82■□□□□ 0.12
GPC1-204ENST00000426280 SPDYE2Q495Y8 402 aa15.82■□□□□ 0.12
GPC1-204ENST00000426280 C20orf194Q5TEA3 1177 aa15.82■□□□□ 0.12
GPC1-204ENST00000426280 APOBEC3HQ6NTF7 200 aaKnown RBP15.82■□□□□ 0.12
GPC1-204ENST00000426280 RASAL3Q86YV0 1011 aa15.82■□□□□ 0.12
GPC1-204ENST00000426280 APOBEC3FQ8IUX4 373 aaKnown RBP15.82■□□□□ 0.12
GPC1-204ENST00000426280 FTSJ3Q8IY81 847 aaKnown RBP15.82■□□□□ 0.12
GPC1-204ENST00000426280 XAGE2Q96GT9 111 aa15.82■□□□□ 0.12
GPC1-204ENST00000426280 TCP10L2B9ZVM9 353 aa15.81■□□□□ 0.12
GPC1-204ENST00000426280 SLC10A3P09131 477 aa15.81■□□□□ 0.12
GPC1-204ENST00000426280 MAP2K1Q02750 393 aaPredicted RBP15.81■□□□□ 0.12
GPC1-204ENST00000426280 DIXDC1Q155Q3 683 aa15.81■□□□□ 0.12
GPC1-204ENST00000426280 ARAP2Q8WZ64 1704 aa15.8■□□□□ 0.12
GPC1-204ENST00000426280 CTCFP49711 727 aaPredicted RBP15.8■□□□□ 0.12
GPC1-204ENST00000426280 RASGRF1Q13972 1273 aa15.8■□□□□ 0.12
GPC1-204ENST00000426280 TTLL12Q14166 644 aaPredicted RBP15.8■□□□□ 0.12
GPC1-204ENST00000426280 LDLRAD1Q5T700 205 aa15.8■□□□□ 0.12
GPC1-204ENST00000426280 PI16Q6UXB8 463 aa15.8■□□□□ 0.12
GPC1-204ENST00000426280 TBC1D22AQ8WUA7 517 aa15.8■□□□□ 0.12
GPC1-204ENST00000426280 TEPSINQ96N21 525 aa15.8■□□□□ 0.12
GPC1-204ENST00000426280 NEUROD6Q96NK8 337 aa15.8■□□□□ 0.12
GPC1-204ENST00000426280 CSRNP1Q96S65 589 aa15.8■□□□□ 0.12
GPC1-204ENST00000426280 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.8■□□□□ 0.12
GPC1-204ENST00000426280 RCAN3Q9UKA8 241 aa15.8■□□□□ 0.12
GPC1-204ENST00000426280 COG6Q9Y2V7 657 aa15.8■□□□□ 0.12
GPC1-204ENST00000426280 PAPPA2Q9BXP8 1791 aa15.8■□□□□ 0.12
GPC1-204ENST00000426280 USP2O75604 605 aaPredicted RBP15.79■□□□□ 0.12
GPC1-204ENST00000426280 FKBP1BP68106 108 aa15.79■□□□□ 0.12
GPC1-204ENST00000426280 HDLBPQ00341 1268 aaKnown RBP15.79■□□□□ 0.12
GPC1-204ENST00000426280 MKRN3Q13064 507 aaKnown RBP15.79■□□□□ 0.12
GPC1-204ENST00000426280 NOGQ13253 232 aa15.79■□□□□ 0.12
GPC1-204ENST00000426280 G3BP1Q13283 466 aaKnown RBP eCLIP15.79■□□□□ 0.12
GPC1-204ENST00000426280 IFFO2Q5TF58 517 aa15.79■□□□□ 0.12
GPC1-204ENST00000426280 CEP85Q6P2H3 762 aa15.79■□□□□ 0.12
GPC1-204ENST00000426280 CCDC102AQ96A19 550 aa15.79■□□□□ 0.12
GPC1-204ENST00000426280 AIDAQ96BJ3 306 aa15.79■□□□□ 0.12
GPC1-204ENST00000426280 CLMNQ96JQ2 1002 aa15.79■□□□□ 0.12
GPC1-204ENST00000426280 TMEM39BQ9GZU3 492 aa15.79■□□□□ 0.12
GPC1-204ENST00000426280 ANGEL1Q9UNK9 670 aaKnown RBP15.79■□□□□ 0.12
GPC1-204ENST00000426280 SURF6O75683 361 aaKnown RBP15.78■□□□□ 0.12
GPC1-204ENST00000426280 WDR66Q8TBY9 1149 aa15.78■□□□□ 0.12
GPC1-204ENST00000426280 ZNF384Q8TF68 577 aa15.78■□□□□ 0.12
GPC1-204ENST00000426280 TEKT1Q969V4 418 aa15.78■□□□□ 0.12
GPC1-204ENST00000426280 ZDHHC15Q96MV8 337 aa15.78■□□□□ 0.12
GPC1-204ENST00000426280 MRIQ9BWK5 157 aa15.78■□□□□ 0.12
GPC1-204ENST00000426280 ECM29Q5VYK3 1845 aa15.78■□□□□ 0.12
GPC1-204ENST00000426280 MYO1BO43795 1136 aa15.77■□□□□ 0.12
GPC1-204ENST00000426280 HHIPL2Q6UWX4 724 aa15.77■□□□□ 0.12
GPC1-204ENST00000426280 TBC1D9Q6ZT07 1266 aa15.77■□□□□ 0.12
GPC1-204ENST00000426280 SIRT2Q8IXJ6 389 aa15.77■□□□□ 0.12
GPC1-204ENST00000426280 PRDM10Q9NQV6 1147 aa15.77■□□□□ 0.12
GPC1-204ENST00000426280 HMG20BQ9P0W2 317 aa15.77■□□□□ 0.12
GPC1-204ENST00000426280 DENND2AQ9ULE3 1009 aa15.77■□□□□ 0.12
GPC1-204ENST00000426280 AKAP2Q9Y2D5 859 aa15.77■□□□□ 0.12
GPC1-204ENST00000426280 NOP58Q9Y2X3 529 aaKnown RBP15.77■□□□□ 0.12
GPC1-204ENST00000426280 DAGLAQ9Y4D2 1042 aa15.77■□□□□ 0.12
GPC1-204ENST00000426280 MAP3K11Q16584 847 aa15.76■□□□□ 0.11
GPC1-204ENST00000426280 CDC42EP5Q6NZY7 148 aa15.76■□□□□ 0.11
GPC1-204ENST00000426280 ZFPM1Q8IX07 1006 aa15.76■□□□□ 0.11
GPC1-204ENST00000426280 TNS4Q8IZW8 715 aa15.76■□□□□ 0.11
GPC1-204ENST00000426280 DBNDD2Q9BQY9 259 aa15.76■□□□□ 0.11
GPC1-204ENST00000426280 GNL3LQ9NVN8 582 aaKnown RBP15.76■□□□□ 0.11
GPC1-204ENST00000426280 RNF186Q9NXI6 227 aa15.76■□□□□ 0.11
GPC1-204ENST00000426280 TLR7Q9NYK1 1049 aaKnown RBP15.76■□□□□ 0.11
GPC1-204ENST00000426280 SUGT1Q9Y2Z0 365 aa15.76■□□□□ 0.11
GPC1-204ENST00000426280 SALL1Q9NSC2 1324 aa15.75■□□□□ 0.11
GPC1-204ENST00000426280 GJA5P36382 358 aa15.75■□□□□ 0.11
GPC1-204ENST00000426280 NFIAQ12857 509 aa15.75■□□□□ 0.11
GPC1-204ENST00000426280 MVPQ14764 893 aaKnown RBP15.75■□□□□ 0.11
GPC1-204ENST00000426280 TNNI3KQ59H18 835 aa15.75■□□□□ 0.11
GPC1-204ENST00000426280 ARMC9Q7Z3E5 817 aa15.75■□□□□ 0.11
GPC1-204ENST00000426280 EAF2Q96CJ1 260 aaPredicted RBP15.75■□□□□ 0.11
GPC1-204ENST00000426280 ZBTB40Q9NUA8 1239 aa15.75■□□□□ 0.11
GPC1-204ENST00000426280 PPP2R3BQ9Y5P8 575 aa15.75■□□□□ 0.11
GPC1-204ENST00000426280 FPGT-TNNI3KV9GXZ4 949 aa15.75■□□□□ 0.11
GPC1-204ENST00000426280 SEMA3EO15041 775 aa15.74■□□□□ 0.11
GPC1-204ENST00000426280 ZBTB22O15209 634 aa15.74■□□□□ 0.11
GPC1-204ENST00000426280 LDHBP07195 334 aaKnown RBP15.74■□□□□ 0.11
GPC1-204ENST00000426280 SLURP2P0DP57 97 aa15.74■□□□□ 0.11
GPC1-204ENST00000426280 NF2P35240 595 aa15.74■□□□□ 0.11
GPC1-204ENST00000426280 MCAMP43121 646 aa15.74■□□□□ 0.11
GPC1-204ENST00000426280 CCDC8Q9H0W5 538 aaPredicted RBP15.74■□□□□ 0.11
GPC1-204ENST00000426280 SNRKQ9NRH2 765 aa15.74■□□□□ 0.11
GPC1-204ENST00000426280 EXOC6BQ9Y2D4 811 aa15.74■□□□□ 0.11
GPC1-204ENST00000426280 TRPA1O75762 1119 aa15.73■□□□□ 0.11
GPC1-204ENST00000426280 CNKSR2Q8WXI2 1034 aa15.73■□□□□ 0.11
GPC1-204ENST00000426280 FAM198AQ9UFP1 575 aa15.73■□□□□ 0.11
GPC1-204ENST00000426280 ABCF2Q9UG63 623 aa15.73■□□□□ 0.11
GPC1-204ENST00000426280 MYH13Q9UKX3 1938 aa15.72■□□□□ 0.11
GPC1-204ENST00000426280 ARID4AP29374 1257 aaPredicted RBP15.72■□□□□ 0.11
GPC1-204ENST00000426280 MECOMQ03112 1051 aa15.72■□□□□ 0.11
GPC1-204ENST00000426280 TCP10Q12799 353 aa15.72■□□□□ 0.11
GPC1-204ENST00000426280 OS9Q13438 667 aaPredicted RBP15.72■□□□□ 0.11
GPC1-204ENST00000426280 SUPT20HL1Q3ZLR7 823 aa15.72■□□□□ 0.11
GPC1-204ENST00000426280 SPRYD7Q5W111 196 aa15.72■□□□□ 0.11
GPC1-204ENST00000426280 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.72■□□□□ 0.11
GPC1-204ENST00000426280 SPATA5Q8NB90 893 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms