RNA–Protein interactions for RNA: ENST00000425971.2

HMGB1P32-201, Transcript of high mobility group box 1 pseudogene 32, humanhuman

BASIC

Gene HMGB1P32, Length 565 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P32-201ENST00000425971 ARID5AQ03989 594 aa9.74□□□□□ -0.85
HMGB1P32-201ENST00000425971 PCDH1Q08174 1060 aa9.74□□□□□ -0.85
HMGB1P32-201ENST00000425971 PSAPL1Q6NUJ1 521 aa9.74□□□□□ -0.85
HMGB1P32-201ENST00000425971 KIAA0825Q8IV33 1275 aa9.74□□□□□ -0.85
HMGB1P32-201ENST00000425971 MICALL1Q8N3F8 863 aa9.74□□□□□ -0.85
HMGB1P32-201ENST00000425971 COL25A1Q9BXS0 654 aaPredicted RBP9.74□□□□□ -0.85
HMGB1P32-201ENST00000425971 TMEM39AQ9NV64 488 aa9.74□□□□□ -0.85
HMGB1P32-201ENST00000425971 ABCC10Q5T3U5 1492 aa9.73□□□□□ -0.85
HMGB1P32-201ENST00000425971 MINDY4BA8MYZ0 360 aa9.73□□□□□ -0.85
HMGB1P32-201ENST00000425971 RPS26P62854 115 aaKnown RBP9.73□□□□□ -0.85
HMGB1P32-201ENST00000425971 ZNF423Q2M1K9 1284 aa9.73□□□□□ -0.85
HMGB1P32-201ENST00000425971 LCE2AQ5TA79 106 aaPredicted RBP9.73□□□□□ -0.85
HMGB1P32-201ENST00000425971 TTBK2Q6IQ55 1244 aa9.73□□□□□ -0.85
HMGB1P32-201ENST00000425971 AGMOQ6ZNB7 445 aa9.73□□□□□ -0.85
HMGB1P32-201ENST00000425971 GOLGA6L1Q8N7Z2 621 aa9.73□□□□□ -0.85
HMGB1P32-201ENST00000425971 ARMC5Q96C12 935 aa9.73□□□□□ -0.85
HMGB1P32-201ENST00000425971 GDF2Q9UK05 429 aaPredicted RBP9.73□□□□□ -0.85
HMGB1P32-201ENST00000425971 TLR6Q9Y2C9 796 aa9.73□□□□□ -0.85
HMGB1P32-201ENST00000425971 TDRD9Q8NDG6 1382 aaKnown RBP9.73□□□□□ -0.85
HMGB1P32-201ENST00000425971 FGRP09769 529 aa9.72□□□□□ -0.85
HMGB1P32-201ENST00000425971 ATF4P18848 351 aaPredicted RBP9.72□□□□□ -0.85
HMGB1P32-201ENST00000425971 LMNB2Q03252 620 aa9.72□□□□□ -0.85
HMGB1P32-201ENST00000425971 PCNX4Q63HM2 1172 aa9.72□□□□□ -0.85
HMGB1P32-201ENST00000425971 SLC16A10Q8TF71 515 aa9.72□□□□□ -0.85
HMGB1P32-201ENST00000425971 LACRTQ9GZZ8 138 aa9.72□□□□□ -0.85
HMGB1P32-201ENST00000425971 PPP1R1BQ9UD71 204 aaPredicted RBP9.72□□□□□ -0.85
HMGB1P32-201ENST00000425971 STARD13Q9Y3M8 1113 aa9.72□□□□□ -0.85
HMGB1P32-201ENST00000425971 DNMBPQ6XZF7 1577 aa9.71□□□□□ -0.85
HMGB1P32-201ENST00000425971 DIP2BQ9P265 1576 aa9.71□□□□□ -0.85
HMGB1P32-201ENST00000425971 PF4P02776 101 aa9.71□□□□□ -0.86
HMGB1P32-201ENST00000425971 ESRRAP11474 423 aaPredicted RBP9.71□□□□□ -0.86
HMGB1P32-201ENST00000425971 TFE3P19532 575 aaPredicted RBP9.71□□□□□ -0.86
HMGB1P32-201ENST00000425971 SRSF11Q05519 484 aaKnown RBP9.71□□□□□ -0.86
HMGB1P32-201ENST00000425971 GRIK5Q16478 980 aa9.71□□□□□ -0.86
HMGB1P32-201ENST00000425971 FBXL19Q6PCT2 694 aa9.71□□□□□ -0.86
HMGB1P32-201ENST00000425971 C20orf204Q6ZNR8 217 aa9.71□□□□□ -0.86
HMGB1P32-201ENST00000425971 CACTIN-AS1Q8N1I8 211 aa9.71□□□□□ -0.86
HMGB1P32-201ENST00000425971 ZNF296Q8WUU4 475 aaPredicted RBP9.71□□□□□ -0.86
HMGB1P32-201ENST00000425971 EAF1Q96JC9 268 aaPredicted RBP9.71□□□□□ -0.86
HMGB1P32-201ENST00000425971 ERBB4Q15303 1308 aa9.71□□□□□ -0.86
HMGB1P32-201ENST00000425971 EPXP11678 715 aa9.7□□□□□ -0.86
HMGB1P32-201ENST00000425971 ATP2B1P20020 1258 aa9.7□□□□□ -0.86
HMGB1P32-201ENST00000425971 EPHA1P21709 976 aa9.7□□□□□ -0.86
HMGB1P32-201ENST00000425971 ZNF157P51786 506 aaPredicted RBP9.7□□□□□ -0.86
HMGB1P32-201ENST00000425971 KRT76Q01546 638 aa9.7□□□□□ -0.86
HMGB1P32-201ENST00000425971 PPP2R3AQ06190 1150 aa9.7□□□□□ -0.86
HMGB1P32-201ENST00000425971 CAMK2GQ13555 558 aaPredicted RBP9.7□□□□□ -0.86
HMGB1P32-201ENST00000425971 MCF2L2Q86YR7 1114 aa9.7□□□□□ -0.86
HMGB1P32-201ENST00000425971 NT5C1AQ9BXI3 368 aa9.7□□□□□ -0.86
HMGB1P32-201ENST00000425971 RAD54L2Q9Y4B4 1467 aa9.7□□□□□ -0.86
HMGB1P32-201ENST00000425971 GREM1O60565 184 aa9.69□□□□□ -0.86
HMGB1P32-201ENST00000425971 RGS9O75916 674 aaPredicted RBP9.69□□□□□ -0.86
HMGB1P32-201ENST00000425971 TSPOAP1O95153 1857 aa9.69□□□□□ -0.86
HMGB1P32-201ENST00000425971 POLA1P09884 1462 aaPredicted RBP9.69□□□□□ -0.86
HMGB1P32-201ENST00000425971 BMP6P22004 513 aa9.69□□□□□ -0.86
HMGB1P32-201ENST00000425971 NME2P22392 152 aa9.69□□□□□ -0.86
HMGB1P32-201ENST00000425971 CDC27P30260 824 aa9.69□□□□□ -0.86
HMGB1P32-201ENST00000425971 FAM160A1Q05DH4 1040 aa9.69□□□□□ -0.86
HMGB1P32-201ENST00000425971 LCE2CQ5TA81 110 aa9.69□□□□□ -0.86
HMGB1P32-201ENST00000425971 RASIP1Q5U651 963 aa9.69□□□□□ -0.86
HMGB1P32-201ENST00000425971 VPS37DQ86XT2 251 aa9.69□□□□□ -0.86
HMGB1P32-201ENST00000425971 SPATA32Q96LK8 384 aa9.69□□□□□ -0.86
HMGB1P32-201ENST00000425971 MAGI1Q96QZ7 1491 aaPredicted RBP9.69□□□□□ -0.86
HMGB1P32-201ENST00000425971 SH2B1Q9NRF2 756 aaPredicted RBP9.69□□□□□ -0.86
HMGB1P32-201ENST00000425971 SUPT16HQ9Y5B9 1047 aaKnown RBP9.69□□□□□ -0.86
HMGB1P32-201ENST00000425971 ALBP02768 609 aa9.68□□□□□ -0.86
HMGB1P32-201ENST00000425971 ALAS2P22557 587 aa9.68□□□□□ -0.86
HMGB1P32-201ENST00000425971 SNAP47Q5SQN1 464 aa9.68□□□□□ -0.86
HMGB1P32-201ENST00000425971 TRIM42Q8IWZ5 723 aa9.68□□□□□ -0.86
HMGB1P32-201ENST00000425971 NUDT8Q8WV74 236 aa9.68□□□□□ -0.86
HMGB1P32-201ENST00000425971 DHX38Q92620 1227 aaKnown RBP9.68□□□□□ -0.86
HMGB1P32-201ENST00000425971 ACDQ96AP0 544 aa9.68□□□□□ -0.86
HMGB1P32-201ENST00000425971 SEC16BQ96JE7 1060 aa9.68□□□□□ -0.86
HMGB1P32-201ENST00000425971 ABCC8Q09428 1581 aa9.67□□□□□ -0.86
HMGB1P32-201ENST00000425971 SPATA31D1Q6ZQQ2 1576 aa9.67□□□□□ -0.86
HMGB1P32-201ENST00000425971 H3BRJ5 948 aa9.67□□□□□ -0.86
HMGB1P32-201ENST00000425971 BAG6P46379 1132 aa9.67□□□□□ -0.86
HMGB1P32-201ENST00000425971 IKBKEQ14164 716 aa9.67□□□□□ -0.86
HMGB1P32-201ENST00000425971 GDF6Q6KF10 455 aaPredicted RBP9.67□□□□□ -0.86
HMGB1P32-201ENST00000425971 C1orf229Q6ZS94 237 aaPredicted RBP9.67□□□□□ -0.86
HMGB1P32-201ENST00000425971 SULF2Q8IWU5 870 aa9.67□□□□□ -0.86
HMGB1P32-201ENST00000425971 STK35Q8TDR2 534 aa9.67□□□□□ -0.86
HMGB1P32-201ENST00000425971 SAMM50Q9Y512 469 aa9.67□□□□□ -0.86
HMGB1P32-201ENST00000425971 FAM177BA6PVY3 158 aa9.66□□□□□ -0.86
HMGB1P32-201ENST00000425971 CABP4P57796 275 aa9.66□□□□□ -0.86
HMGB1P32-201ENST00000425971 KANK3Q6NY19 840 aa9.66□□□□□ -0.86
HMGB1P32-201ENST00000425971 CCDC84Q86UT8 332 aaPredicted RBP9.66□□□□□ -0.86
HMGB1P32-201ENST00000425971 GOLM1Q8NBJ4 401 aa9.66□□□□□ -0.86
HMGB1P32-201ENST00000425971 IRF7Q92985 503 aa9.66□□□□□ -0.86
HMGB1P32-201ENST00000425971 SOX17Q9H6I2 414 aaPredicted RBP9.66□□□□□ -0.86
HMGB1P32-201ENST00000425971 JPH1Q9HDC5 661 aaPredicted RBP9.66□□□□□ -0.86
HMGB1P32-201ENST00000425971 CYP8B1Q9UNU6 501 aa9.66□□□□□ -0.86
HMGB1P32-201ENST00000425971 SOX1O00570 391 aaPredicted RBP9.65□□□□□ -0.86
HMGB1P32-201ENST00000425971 ADAMTS2O95450 1211 aa9.65□□□□□ -0.86
HMGB1P32-201ENST00000425971 FAM196AQ6ZSG2 479 aa9.65□□□□□ -0.86
HMGB1P32-201ENST00000425971 PDZD3Q86UT5 571 aa9.65□□□□□ -0.86
HMGB1P32-201ENST00000425971 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.65□□□□□ -0.86
HMGB1P32-201ENST00000425971 LRRC3Q9BY71 257 aa9.65□□□□□ -0.86
HMGB1P32-201ENST00000425971 PCDHB5Q9Y5E4 795 aa9.65□□□□□ -0.86
HMGB1P32-201ENST00000425971 CEP170Q5SW79 1584 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms