RNA–Protein interactions for RNA: ENST00000425231.2

CDCP1-202, Transcript of CUB domain containing protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDCP1, Length 1,416 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-202ENST00000425231 PRKG1Q13976 671 aa26.8■■□□□ 1.88
CDCP1-202ENST00000425231 SPDYE2Q495Y8 402 aa26.8■■□□□ 1.88
CDCP1-202ENST00000425231 ZNF70Q9UC06 446 aaPredicted RBP26.8■■□□□ 1.88
CDCP1-202ENST00000425231 LDLRAD1Q5T700 205 aa26.79■■□□□ 1.88
CDCP1-202ENST00000425231 ARMC9Q7Z3E5 817 aa26.79■■□□□ 1.88
CDCP1-202ENST00000425231 TMEM57Q8N5G2 664 aa26.79■■□□□ 1.88
CDCP1-202ENST00000425231 FZD1Q9UP38 647 aa26.79■■□□□ 1.88
CDCP1-202ENST00000425231 SSC5DA1L4H1 1573 aa26.79■■□□□ 1.88
CDCP1-202ENST00000425231 GNAI2P04899 355 aa26.78■■□□□ 1.88
CDCP1-202ENST00000425231 RASA3Q14644 834 aa26.78■■□□□ 1.88
CDCP1-202ENST00000425231 MRIQ9BWK5 157 aa26.78■■□□□ 1.88
CDCP1-202ENST00000425231 SUGT1Q9Y2Z0 365 aa26.78■■□□□ 1.88
CDCP1-202ENST00000425231 ANGEL1Q9UNK9 670 aaKnown RBP26.77■■□□□ 1.88
CDCP1-202ENST00000425231 MAP3K11Q16584 847 aa26.76■■□□□ 1.87
CDCP1-202ENST00000425231 NBPF12Q5TAG4 269 aaPredicted RBP26.76■■□□□ 1.87
CDCP1-202ENST00000425231 REM2Q8IYK8 340 aaPredicted RBP26.76■■□□□ 1.87
CDCP1-202ENST00000425231 RNF186Q9NXI6 227 aa26.76■■□□□ 1.87
CDCP1-202ENST00000425231 MYH13Q9UKX3 1938 aa26.76■■□□□ 1.87
CDCP1-202ENST00000425231 SUPT20HL1Q3ZLR7 823 aa26.75■■□□□ 1.87
CDCP1-202ENST00000425231 WDR66Q8TBY9 1149 aa26.75■■□□□ 1.87
CDCP1-202ENST00000425231 TEKT1Q969V4 418 aa26.75■■□□□ 1.87
CDCP1-202ENST00000425231 SAGE1Q9NXZ1 904 aa26.75■■□□□ 1.87
CDCP1-202ENST00000425231 TNFAIP1Q13829 316 aa26.74■■□□□ 1.87
CDCP1-202ENST00000425231 AKAP11Q9UKA4 1901 aa26.74■■□□□ 1.87
CDCP1-202ENST00000425231 PNMA6EA0A0J9YXQ4 647 aa26.73■■□□□ 1.87
CDCP1-202ENST00000425231 CAPN15O75808 1086 aa26.73■■□□□ 1.87
CDCP1-202ENST00000425231 PHKA1P46020 1223 aa26.73■■□□□ 1.87
CDCP1-202ENST00000425231 TIMM10P62072 90 aa26.73■■□□□ 1.87
CDCP1-202ENST00000425231 ZDHHC15Q96MV8 337 aa26.73■■□□□ 1.87
CDCP1-202ENST00000425231 CASP8AP2Q9UKL3 1982 aa26.73■■□□□ 1.87
CDCP1-202ENST00000425231 PPP1R12BO60237 982 aaPredicted RBP26.73■■□□□ 1.87
CDCP1-202ENST00000425231 TRPA1O75762 1119 aa26.73■■□□□ 1.87
CDCP1-202ENST00000425231 ADORA1P30542 326 aa26.73■■□□□ 1.87
CDCP1-202ENST00000425231 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP26.73■■□□□ 1.87
CDCP1-202ENST00000425231 TCP10L2B9ZVM9 353 aa26.72■■□□□ 1.87
CDCP1-202ENST00000425231 ZBTB22O15209 634 aa26.72■■□□□ 1.87
CDCP1-202ENST00000425231 TFCP2Q12800 502 aa26.72■■□□□ 1.87
CDCP1-202ENST00000425231 APOBEC3HQ6NTF7 200 aaKnown RBP26.72■■□□□ 1.87
CDCP1-202ENST00000425231 TEPSINQ96N21 525 aa26.72■■□□□ 1.87
CDCP1-202ENST00000425231 GNL3LQ9NVN8 582 aaKnown RBP26.72■■□□□ 1.87
CDCP1-202ENST00000425231 MAST3O60307 1309 aa26.72■■□□□ 1.87
CDCP1-202ENST00000425231 USP2O75604 605 aaPredicted RBP26.71■■□□□ 1.87
CDCP1-202ENST00000425231 RLBP1P12271 317 aa26.71■■□□□ 1.87
CDCP1-202ENST00000425231 CCDC102BQ68D86 513 aa26.71■■□□□ 1.87
CDCP1-202ENST00000425231 HHIPL2Q6UWX4 724 aa26.71■■□□□ 1.87
CDCP1-202ENST00000425231 SEMA3EO15041 775 aa26.7■■□□□ 1.86
CDCP1-202ENST00000425231 CDAN1Q8IWY9 1227 aa26.7■■□□□ 1.86
CDCP1-202ENST00000425231 A0A1B0GUL7 405 aa26.69■■□□□ 1.86
CDCP1-202ENST00000425231 UNCXA6NJT0 531 aa26.69■■□□□ 1.86
CDCP1-202ENST00000425231 TM4SF4P48230 202 aa26.69■■□□□ 1.86
CDCP1-202ENST00000425231 MKRN3Q13064 507 aaKnown RBP26.69■■□□□ 1.86
CDCP1-202ENST00000425231 SPRYD7Q5W111 196 aa26.69■■□□□ 1.86
CDCP1-202ENST00000425231 FTSJ3Q8IY81 847 aaKnown RBP26.69■■□□□ 1.86
CDCP1-202ENST00000425231 TMEM39BQ9GZU3 492 aa26.69■■□□□ 1.86
CDCP1-202ENST00000425231 DENND2AQ9ULE3 1009 aa26.69■■□□□ 1.86
CDCP1-202ENST00000425231 AKAP2Q9Y2D5 859 aa26.69■■□□□ 1.86
CDCP1-202ENST00000425231 SALL1Q9NSC2 1324 aa26.68■■□□□ 1.86
CDCP1-202ENST00000425231 PRDX5P30044 214 aa26.68■■□□□ 1.86
CDCP1-202ENST00000425231 TNNI2P48788 182 aa26.68■■□□□ 1.86
CDCP1-202ENST00000425231 CACNB3P54284 484 aa26.68■■□□□ 1.86
CDCP1-202ENST00000425231 SLC10A4Q96EP9 437 aa26.68■■□□□ 1.86
CDCP1-202ENST00000425231 CLMNQ96JQ2 1002 aa26.68■■□□□ 1.86
CDCP1-202ENST00000425231 ZBTB7BO15156 539 aaPredicted RBP26.67■■□□□ 1.86
CDCP1-202ENST00000425231 XAGE2Q96GT9 111 aa26.67■■□□□ 1.86
CDCP1-202ENST00000425231 POLA2Q14181 598 aa26.66■■□□□ 1.86
CDCP1-202ENST00000425231 IREB2P48200 963 aaKnown RBP26.65■■□□□ 1.86
CDCP1-202ENST00000425231 ATP8B2P98198 1209 aa26.65■■□□□ 1.86
CDCP1-202ENST00000425231 FKBP1CQ5VVH2 108 aa26.65■■□□□ 1.86
CDCP1-202ENST00000425231 ITPRIPQ8IWB1 547 aa26.65■■□□□ 1.86
CDCP1-202ENST00000425231 LDHBP07195 334 aaKnown RBP26.65■■□□□ 1.86
CDCP1-202ENST00000425231 G3BP1Q13283 466 aaKnown RBP eCLIP26.65■■□□□ 1.86
CDCP1-202ENST00000425231 RASGRF1Q13972 1273 aa26.65■■□□□ 1.86
CDCP1-202ENST00000425231 DIXDC1Q155Q3 683 aa26.65■■□□□ 1.86
CDCP1-202ENST00000425231 SSH3Q8TE77 659 aa26.65■■□□□ 1.86
CDCP1-202ENST00000425231 DAGLAQ9Y4D2 1042 aa26.65■■□□□ 1.86
CDCP1-202ENST00000425231 FAM83AQ86UY5 434 aa26.64■■□□□ 1.85
CDCP1-202ENST00000425231 ANKRD13AQ8IZ07 590 aa26.64■■□□□ 1.85
CDCP1-202ENST00000425231 ABHD8Q96I13 439 aa26.64■■□□□ 1.85
CDCP1-202ENST00000425231 C1orf115Q9H7X2 142 aa26.64■■□□□ 1.85
CDCP1-202ENST00000425231 TMOD2Q9NZR1 351 aa26.64■■□□□ 1.85
CDCP1-202ENST00000425231 PDS5AQ29RF7 1337 aaKnown RBP26.63■■□□□ 1.85
CDCP1-202ENST00000425231 SREBF2Q12772 1141 aa26.63■■□□□ 1.85
CDCP1-202ENST00000425231 MVPQ14764 893 aaKnown RBP26.63■■□□□ 1.85
CDCP1-202ENST00000425231 WNK4Q96J92 1243 aa26.63■■□□□ 1.85
CDCP1-202ENST00000425231 NEUROD6Q96NK8 337 aa26.63■■□□□ 1.85
CDCP1-202ENST00000425231 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.63■■□□□ 1.85
CDCP1-202ENST00000425231 ZBTB48P10074 688 aaPredicted RBP26.62■■□□□ 1.85
CDCP1-202ENST00000425231 OTOFQ9HC10 1997 aa26.61■■□□□ 1.85
CDCP1-202ENST00000425231 CDC42EP5Q6NZY7 148 aa26.61■■□□□ 1.85
CDCP1-202ENST00000425231 GJA5P36382 358 aa26.6■■□□□ 1.85
CDCP1-202ENST00000425231 PPP1R3FQ6ZSY5 799 aaPredicted RBP26.6■■□□□ 1.85
CDCP1-202ENST00000425231 ZGPATQ8N5A5 531 aaKnown RBP26.6■■□□□ 1.85
CDCP1-202ENST00000425231 PANK1Q8TE04 598 aa26.6■■□□□ 1.85
CDCP1-202ENST00000425231 LAMB1P07942 1786 aa26.59■■□□□ 1.85
CDCP1-202ENST00000425231 MANSC4A6NHS7 340 aaPredicted RBP26.59■■□□□ 1.85
CDCP1-202ENST00000425231 TBC1D8O95759 1140 aa26.59■■□□□ 1.85
CDCP1-202ENST00000425231 MCOLN1Q9GZU1 580 aa26.59■■□□□ 1.85
CDCP1-202ENST00000425231 INHBEP58166 350 aa26.58■■□□□ 1.85
CDCP1-202ENST00000425231 DDX55Q8NHQ9 600 aaKnown RBP eCLIP26.58■■□□□ 1.85
CDCP1-202ENST00000425231 MAP3K9P80192 1104 aa26.57■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms