RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 TUBB4AP04350 444 aa12.99□□□□□ -0.33
SEC61A1-202ENST00000424880 PNOCQ13519 176 aa12.99□□□□□ -0.33
SEC61A1-202ENST00000424880 ANKRD1Q15327 319 aa12.99□□□□□ -0.33
SEC61A1-202ENST00000424880 SPECC1Q5M775 1068 aa12.99□□□□□ -0.33
SEC61A1-202ENST00000424880 JAKMIP3Q5VZ66 844 aa12.99□□□□□ -0.33
SEC61A1-202ENST00000424880 BANK1Q8NDB2 785 aa12.99□□□□□ -0.33
SEC61A1-202ENST00000424880 KAT2BQ92831 832 aa12.99□□□□□ -0.33
SEC61A1-202ENST00000424880 CHPF2Q9P2E5 772 aa12.99□□□□□ -0.33
SEC61A1-202ENST00000424880 ZNF202O95125 648 aa12.98□□□□□ -0.33
SEC61A1-202ENST00000424880 CCDC172P0C7W6 258 aa12.98□□□□□ -0.33
SEC61A1-202ENST00000424880 VSNL1P62760 191 aa12.98□□□□□ -0.33
SEC61A1-202ENST00000424880 BEND6Q5SZJ8 279 aaPredicted RBP12.98□□□□□ -0.33
SEC61A1-202ENST00000424880 NUTM2GQ5VZR2 741 aa12.98□□□□□ -0.33
SEC61A1-202ENST00000424880 ZSCAN16Q9H4T2 348 aaPredicted RBP12.98□□□□□ -0.33
SEC61A1-202ENST00000424880 KCNG1Q9UIX4 513 aa12.98□□□□□ -0.33
SEC61A1-202ENST00000424880 STRCP1A6NGW2 1772 aa12.98□□□□□ -0.33
SEC61A1-202ENST00000424880 CYP21A2P08686 494 aa12.98□□□□□ -0.33
SEC61A1-202ENST00000424880 GSCP56915 257 aaPredicted RBP12.98□□□□□ -0.33
SEC61A1-202ENST00000424880 LONRF3Q496Y0 759 aa12.98□□□□□ -0.33
SEC61A1-202ENST00000424880 SWT1Q5T5J6 900 aaKnown RBP12.98□□□□□ -0.33
SEC61A1-202ENST00000424880 SUGP1Q8IWZ8 645 aaKnown RBP12.98□□□□□ -0.33
SEC61A1-202ENST00000424880 TRMT44Q8IYL2 757 aaKnown RBP12.98□□□□□ -0.33
SEC61A1-202ENST00000424880 USHBP1Q8N6Y0 703 aa12.98□□□□□ -0.33
SEC61A1-202ENST00000424880 NSUN7Q8NE18 718 aaKnown RBP12.98□□□□□ -0.33
SEC61A1-202ENST00000424880 BAG1Q99933 345 aaPredicted RBP12.98□□□□□ -0.33
SEC61A1-202ENST00000424880 C9orf78Q9NZ63 289 aaPredicted RBP12.98□□□□□ -0.33
SEC61A1-202ENST00000424880 SOWAHDA6NJG2 315 aa12.98□□□□□ -0.33
SEC61A1-202ENST00000424880 FKBP15Q5T1M5 1219 aa12.98□□□□□ -0.33
SEC61A1-202ENST00000424880 USP31Q70CQ4 1352 aa12.97□□□□□ -0.33
SEC61A1-202ENST00000424880 LRRIQ3A6PVS8 624 aaPredicted RBP12.97□□□□□ -0.33
SEC61A1-202ENST00000424880 KCNQ3O43525 872 aa12.97□□□□□ -0.33
SEC61A1-202ENST00000424880 NPHP4O75161 1426 aaPredicted RBP12.97□□□□□ -0.33
SEC61A1-202ENST00000424880 XIRP1Q702N8 1843 aaKnown RBP12.97□□□□□ -0.33
SEC61A1-202ENST00000424880 MAP2K7O14733 419 aa12.97□□□□□ -0.33
SEC61A1-202ENST00000424880 A1BGP04217 495 aa12.97□□□□□ -0.33
SEC61A1-202ENST00000424880 ZNF827Q17R98 1081 aa12.97□□□□□ -0.33
SEC61A1-202ENST00000424880 RABGGTAQ92696 567 aa12.97□□□□□ -0.33
SEC61A1-202ENST00000424880 KIFC2Q96AC6 838 aa12.97□□□□□ -0.33
SEC61A1-202ENST00000424880 FOXN1O15353 648 aa12.96□□□□□ -0.33
SEC61A1-202ENST00000424880 RPS6KA5O75582 802 aa12.96□□□□□ -0.33
SEC61A1-202ENST00000424880 IVLP07476 585 aa12.96□□□□□ -0.33
SEC61A1-202ENST00000424880 TPM1P09493 284 aa12.96□□□□□ -0.33
SEC61A1-202ENST00000424880 HSP90B2PQ58FF3 399 aa12.96□□□□□ -0.33
SEC61A1-202ENST00000424880 STOX1Q6ZVD7 989 aa12.96□□□□□ -0.33
SEC61A1-202ENST00000424880 PPM1EQ8WY54 764 aa12.96□□□□□ -0.33
SEC61A1-202ENST00000424880 CXorf56Q9H5V9 222 aa12.96□□□□□ -0.33
SEC61A1-202ENST00000424880 INTS13Q9NVM9 706 aa12.96□□□□□ -0.33
SEC61A1-202ENST00000424880 PEAK1Q9H792 1746 aa12.96□□□□□ -0.33
SEC61A1-202ENST00000424880 ZSCAN12O43309 604 aa12.96□□□□□ -0.33
SEC61A1-202ENST00000424880 SASH1O94885 1247 aa12.96□□□□□ -0.33
SEC61A1-202ENST00000424880 CDC27P30260 824 aa12.96□□□□□ -0.33
SEC61A1-202ENST00000424880 CORO7P57737 925 aa12.96□□□□□ -0.33
SEC61A1-202ENST00000424880 TMEM139Q8IV31 216 aa12.96□□□□□ -0.33
SEC61A1-202ENST00000424880 GSPT2Q8IYD1 628 aaKnown RBP12.96□□□□□ -0.33
SEC61A1-202ENST00000424880 KCNB2Q92953 911 aa12.96□□□□□ -0.33
SEC61A1-202ENST00000424880 CARD10Q9BWT7 1032 aa12.96□□□□□ -0.33
SEC61A1-202ENST00000424880 COL15A1P39059 1388 aa12.96□□□□□ -0.33
SEC61A1-202ENST00000424880 CCDC151A5D8V7 595 aa12.96□□□□□ -0.34
SEC61A1-202ENST00000424880 COBLO75128 1261 aa12.96□□□□□ -0.34
SEC61A1-202ENST00000424880 TAF5LO75529 589 aa12.96□□□□□ -0.34
SEC61A1-202ENST00000424880 CASP8Q14790 479 aa12.96□□□□□ -0.34
SEC61A1-202ENST00000424880 HDXQ7Z353 690 aa12.96□□□□□ -0.34
SEC61A1-202ENST00000424880 DNAAF4Q8WXU2 420 aa12.96□□□□□ -0.34
SEC61A1-202ENST00000424880 DONSONQ9NYP3 566 aa12.96□□□□□ -0.34
SEC61A1-202ENST00000424880 KCNJ6P48051 423 aa12.95□□□□□ -0.34
SEC61A1-202ENST00000424880 AIMP1Q12904 312 aaKnown RBP12.95□□□□□ -0.34
SEC61A1-202ENST00000424880 IL17REQ8NFR9 667 aa12.95□□□□□ -0.34
SEC61A1-202ENST00000424880 GPATCH3Q96I76 525 aa12.95□□□□□ -0.34
SEC61A1-202ENST00000424880 CHD2O14647 1828 aaKnown RBP12.95□□□□□ -0.34
SEC61A1-202ENST00000424880 NEDD4P46934 1319 aa12.95□□□□□ -0.34
SEC61A1-202ENST00000424880 CCT5P48643 541 aa12.95□□□□□ -0.34
SEC61A1-202ENST00000424880 ZNF569Q5MCW4 686 aa12.95□□□□□ -0.34
SEC61A1-202ENST00000424880 DDX46Q7L014 1031 aaKnown RBP12.95□□□□□ -0.34
SEC61A1-202ENST00000424880 NOA1Q8NC60 698 aaKnown RBP12.95□□□□□ -0.34
SEC61A1-202ENST00000424880 CDC5LQ99459 802 aaKnown RBP12.95□□□□□ -0.34
SEC61A1-202ENST00000424880 MPHOSPH8Q99549 860 aa12.95□□□□□ -0.34
SEC61A1-202ENST00000424880 ADGRL3Q9HAR2 1447 aa12.95□□□□□ -0.34
SEC61A1-202ENST00000424880 CPP00450 1065 aa12.94□□□□□ -0.34
SEC61A1-202ENST00000424880 AKAP17AQ02040 695 aaKnown RBP12.94□□□□□ -0.34
SEC61A1-202ENST00000424880 PSME1Q06323 249 aa12.94□□□□□ -0.34
SEC61A1-202ENST00000424880 PDE4BQ07343 736 aa12.94□□□□□ -0.34
SEC61A1-202ENST00000424880 KIF4BQ2VIQ3 1234 aa12.94□□□□□ -0.34
SEC61A1-202ENST00000424880 GIGYF1O75420 1035 aaPredicted RBP12.94□□□□□ -0.34
SEC61A1-202ENST00000424880 PFKFB1P16118 471 aa12.94□□□□□ -0.34
SEC61A1-202ENST00000424880 NLRP12P59046 1061 aa12.94□□□□□ -0.34
SEC61A1-202ENST00000424880 NCAPH2Q6IBW4 605 aa12.94□□□□□ -0.34
SEC61A1-202ENST00000424880 ZNF396Q96N95 335 aaPredicted RBP12.94□□□□□ -0.34
SEC61A1-202ENST00000424880 L1RE1Q9UN81 338 aa12.94□□□□□ -0.34
SEC61A1-202ENST00000424880 SAMM50Q9Y512 469 aa12.94□□□□□ -0.34
SEC61A1-202ENST00000424880 NALCNQ8IZF0 1738 aa12.94□□□□□ -0.34
SEC61A1-202ENST00000424880 KIF1CO43896 1103 aaKnown RBP12.94□□□□□ -0.34
SEC61A1-202ENST00000424880 CUTAO60888 179 aa12.94□□□□□ -0.34
SEC61A1-202ENST00000424880 RNF40O75150 1001 aa12.94□□□□□ -0.34
SEC61A1-202ENST00000424880 MRPS25P82663 173 aaKnown RBP12.94□□□□□ -0.34
SEC61A1-202ENST00000424880 ADALQ6DHV7 355 aa12.94□□□□□ -0.34
SEC61A1-202ENST00000424880 EYA1Q99502 592 aa12.94□□□□□ -0.34
SEC61A1-202ENST00000424880 MAP3K5Q99683 1374 aa12.93□□□□□ -0.34
SEC61A1-202ENST00000424880 ARHGAP6O43182 974 aa12.93□□□□□ -0.34
SEC61A1-202ENST00000424880 ATP2B2Q01814 1243 aa12.93□□□□□ -0.34
SEC61A1-202ENST00000424880 BEND3Q5T5X7 828 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms