RNA–Protein interactions for RNA: ENST00000424830.6

PUDP-203, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 3 BASIC

Gene PUDP, Length 1,334 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-203ENST00000424830 TAF1CQ15572 869 aaPredicted RBP20.42■□□□□ 0.86
PUDP-203ENST00000424830 DZIP1LQ8IYY4 767 aaKnown RBP20.42■□□□□ 0.86
PUDP-203ENST00000424830 MS4A4AQ96JQ5 239 aa20.42■□□□□ 0.86
PUDP-203ENST00000424830 ZFYVE28Q9HCC9 887 aa20.42■□□□□ 0.86
PUDP-203ENST00000424830 CSADQ9Y600 493 aa20.42■□□□□ 0.86
PUDP-203ENST00000424830 CCL15-CCL14A0A0B4J2E2 113 aa20.41■□□□□ 0.86
PUDP-203ENST00000424830 TCP10L2B9ZVM9 353 aa20.41■□□□□ 0.86
PUDP-203ENST00000424830 EN2P19622 333 aaPredicted RBP20.41■□□□□ 0.86
PUDP-203ENST00000424830 GYG1P46976 350 aa20.41■□□□□ 0.86
PUDP-203ENST00000424830 MAP3K9P80192 1104 aa20.41■□□□□ 0.86
PUDP-203ENST00000424830 EXOSC9Q06265 439 aaKnown RBP20.41■□□□□ 0.86
PUDP-203ENST00000424830 CCL15Q16663 113 aa20.41■□□□□ 0.86
PUDP-203ENST00000424830 SLC9C1Q4G0N8 1177 aa20.41■□□□□ 0.86
PUDP-203ENST00000424830 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.41■□□□□ 0.86
PUDP-203ENST00000424830 NBPF11Q86T75 865 aa20.41■□□□□ 0.86
PUDP-203ENST00000424830 TEPSINQ96N21 525 aa20.41■□□□□ 0.86
PUDP-203ENST00000424830 CRKP46108 304 aa20.4■□□□□ 0.86
PUDP-203ENST00000424830 VGLL4Q14135 290 aa20.4■□□□□ 0.86
PUDP-203ENST00000424830 CCDC184Q52MB2 194 aa20.4■□□□□ 0.86
PUDP-203ENST00000424830 WDR63Q8IWG1 891 aa20.4■□□□□ 0.86
PUDP-203ENST00000424830 BRI3BPQ8WY22 251 aa20.4■□□□□ 0.86
PUDP-203ENST00000424830 ZNF333Q96JL9 665 aa20.4■□□□□ 0.86
PUDP-203ENST00000424830 TMEM39BQ9GZU3 492 aa20.4■□□□□ 0.86
PUDP-203ENST00000424830 VPS37DQ86XT2 251 aa20.39■□□□□ 0.85
PUDP-203ENST00000424830 CDAN1Q8IWY9 1227 aa20.39■□□□□ 0.85
PUDP-203ENST00000424830 CNKSR2Q8WXI2 1034 aa20.39■□□□□ 0.85
PUDP-203ENST00000424830 OTUD5Q96G74 571 aa20.39■□□□□ 0.85
PUDP-203ENST00000424830 FAM84BQ96KN1 310 aaPredicted RBP20.39■□□□□ 0.85
PUDP-203ENST00000424830 ALDH1L1O75891 902 aa20.38■□□□□ 0.85
PUDP-203ENST00000424830 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.38■□□□□ 0.85
PUDP-203ENST00000424830 CAP1Q01518 475 aa20.37■□□□□ 0.85
PUDP-203ENST00000424830 SALL2Q9Y467 1007 aaPredicted RBP20.37■□□□□ 0.85
PUDP-203ENST00000424830 PTCH2Q9Y6C5 1203 aa20.37■□□□□ 0.85
PUDP-203ENST00000424830 MROH5Q6ZUA9 1318 aa20.37■□□□□ 0.85
PUDP-203ENST00000424830 CEP290O15078 2479 aa20.37■□□□□ 0.85
PUDP-203ENST00000424830 FRAT2O75474 233 aaPredicted RBP20.36■□□□□ 0.85
PUDP-203ENST00000424830 SLC4A8Q2Y0W8 1093 aa20.36■□□□□ 0.85
PUDP-203ENST00000424830 SLC4A10Q6U841 1118 aa20.36■□□□□ 0.85
PUDP-203ENST00000424830 FAM43AQ8N2R8 423 aa20.36■□□□□ 0.85
PUDP-203ENST00000424830 TBC1D22AQ8WUA7 517 aa20.36■□□□□ 0.85
PUDP-203ENST00000424830 SRCIN1Q9C0H9 1055 aa20.36■□□□□ 0.85
PUDP-203ENST00000424830 SPDYE5A6NIY4 337 aa20.35■□□□□ 0.85
PUDP-203ENST00000424830 CETPP11597 493 aa20.35■□□□□ 0.85
PUDP-203ENST00000424830 HDLBPQ00341 1268 aaKnown RBP20.35■□□□□ 0.85
PUDP-203ENST00000424830 KIF22Q14807 665 aa20.35■□□□□ 0.85
PUDP-203ENST00000424830 TEKT1Q969V4 418 aa20.35■□□□□ 0.85
PUDP-203ENST00000424830 HOOK2Q96ED9 719 aa20.35■□□□□ 0.85
PUDP-203ENST00000424830 PUS3Q9BZE2 481 aaKnown RBP20.35■□□□□ 0.85
PUDP-203ENST00000424830 TMOD2Q9NZR1 351 aa20.35■□□□□ 0.85
PUDP-203ENST00000424830 CHAF1AQ13111 956 aaPredicted RBP20.34■□□□□ 0.85
PUDP-203ENST00000424830 CAVIN4Q5BKX8 364 aa20.34■□□□□ 0.85
PUDP-203ENST00000424830 ZCCHC17Q9NP64 241 aaKnown RBP20.34■□□□□ 0.85
PUDP-203ENST00000424830 IQSEC3Q9UPP2 1182 aaPredicted RBP20.34■□□□□ 0.85
PUDP-203ENST00000424830 TLR2O60603 784 aa20.33■□□□□ 0.85
PUDP-203ENST00000424830 ERO1BQ86YB8 467 aa20.33■□□□□ 0.85
PUDP-203ENST00000424830 SUCLG2Q96I99 432 aa20.33■□□□□ 0.85
PUDP-203ENST00000424830 WRNIP1Q96S55 665 aa20.33■□□□□ 0.85
PUDP-203ENST00000424830 MRS2Q9HD23 443 aa20.33■□□□□ 0.85
PUDP-203ENST00000424830 RIPOR2Q9Y4F9 1068 aa20.33■□□□□ 0.85
PUDP-203ENST00000424830 CACNB3P54284 484 aa20.32■□□□□ 0.84
PUDP-203ENST00000424830 SNAPC2Q13487 334 aa20.32■□□□□ 0.84
PUDP-203ENST00000424830 GRIK5Q16478 980 aa20.32■□□□□ 0.84
PUDP-203ENST00000424830 FBXO33Q7Z6M2 555 aa20.32■□□□□ 0.84
PUDP-203ENST00000424830 SNCAIPQ9Y6H5 919 aa20.32■□□□□ 0.84
PUDP-203ENST00000424830 MAST3O60307 1309 aa20.32■□□□□ 0.84
PUDP-203ENST00000424830 MYCP01106 439 aaPredicted RBP20.31■□□□□ 0.84
PUDP-203ENST00000424830 GNRH1P01148 92 aa20.31■□□□□ 0.84
PUDP-203ENST00000424830 FXR1P51114 621 aaKnown RBP eCLIP20.31■□□□□ 0.84
PUDP-203ENST00000424830 METTL24Q5JXM2 366 aa20.31■□□□□ 0.84
PUDP-203ENST00000424830 FAM83AQ86UY5 434 aa20.31■□□□□ 0.84
PUDP-203ENST00000424830 ZDHHC15Q96MV8 337 aa20.31■□□□□ 0.84
PUDP-203ENST00000424830 PRMT2P55345 433 aa20.3■□□□□ 0.84
PUDP-203ENST00000424830 LACTBP83111 547 aaPredicted RBP20.3■□□□□ 0.84
PUDP-203ENST00000424830 FKBP1CQ5VVH2 108 aa20.3■□□□□ 0.84
PUDP-203ENST00000424830 DCAF15Q66K64 600 aa20.3■□□□□ 0.84
PUDP-203ENST00000424830 ZKSCAN4Q969J2 545 aaPredicted RBP20.3■□□□□ 0.84
PUDP-203ENST00000424830 KAZALD1Q96I82 304 aa20.3■□□□□ 0.84
PUDP-203ENST00000424830 BTBD19C9JJ37 291 aa20.29■□□□□ 0.84
PUDP-203ENST00000424830 IRF6O14896 467 aa20.29■□□□□ 0.84
PUDP-203ENST00000424830 NBPF7P0C2Y1 421 aaPredicted RBP20.29■□□□□ 0.84
PUDP-203ENST00000424830 PPIL2Q13356 520 aa20.29■□□□□ 0.84
PUDP-203ENST00000424830 SH3TC2Q8TF17 1288 aa20.29■□□□□ 0.84
PUDP-203ENST00000424830 MRIQ9BWK5 157 aa20.29■□□□□ 0.84
PUDP-203ENST00000424830 ARHGAP39Q9C0H5 1083 aa20.29■□□□□ 0.84
PUDP-203ENST00000424830 BICC1Q9H694 974 aaKnown RBP20.29■□□□□ 0.84
PUDP-203ENST00000424830 SUGT1Q9Y2Z0 365 aa20.29■□□□□ 0.84
PUDP-203ENST00000424830 RPAP1Q9BWH6 1393 aaPredicted RBP20.29■□□□□ 0.84
PUDP-203ENST00000424830 ZSWIM8A7E2V4 1837 aa20.29■□□□□ 0.84
PUDP-203ENST00000424830 PDE8BO95263 885 aa20.28■□□□□ 0.84
PUDP-203ENST00000424830 DIEXFQ68CQ4 756 aaKnown RBP20.28■□□□□ 0.84
PUDP-203ENST00000424830 SPINK5Q9NQ38 1064 aaPredicted RBP20.28■□□□□ 0.84
PUDP-203ENST00000424830 COLQQ9Y215 455 aaPredicted RBP20.28■□□□□ 0.84
PUDP-203ENST00000424830 UTYO14607 1347 aa20.28■□□□□ 0.84
PUDP-203ENST00000424830 TRIOBPQ9H2D6 2365 aa20.28■□□□□ 0.84
PUDP-203ENST00000424830 PPATQ06203 517 aa20.27■□□□□ 0.84
PUDP-203ENST00000424830 RABL6Q3YEC7 729 aaPredicted RBP20.27■□□□□ 0.84
PUDP-203ENST00000424830 LRRC24Q50LG9 513 aa20.27■□□□□ 0.84
PUDP-203ENST00000424830 ZNF341Q9BYN7 854 aa20.27■□□□□ 0.84
PUDP-203ENST00000424830 APOBEC3HQ6NTF7 200 aaKnown RBP20.27■□□□□ 0.83
PUDP-203ENST00000424830 VGLL2Q8N8G2 317 aa20.27■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms