RNA–Protein interactions for RNA: ENST00000422245.5

SQSTM1-203, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-203ENST00000422245 DZIP1LQ8IYY4 767 aaKnown RBP14.45□□□□□ -0.1
SQSTM1-203ENST00000422245 SLC10A4Q96EP9 437 aa14.45□□□□□ -0.1
SQSTM1-203ENST00000422245 IQSEC3Q9UPP2 1182 aaPredicted RBP14.45□□□□□ -0.1
SQSTM1-203ENST00000422245 HDAC5Q9UQL6 1122 aa14.45□□□□□ -0.1
SQSTM1-203ENST00000422245 MYH13Q9UKX3 1938 aa14.45□□□□□ -0.1
SQSTM1-203ENST00000422245 SLC5A1P13866 664 aa14.44□□□□□ -0.1
SQSTM1-203ENST00000422245 INHBEP58166 350 aa14.44□□□□□ -0.1
SQSTM1-203ENST00000422245 NBPF12Q5TAG4 269 aaPredicted RBP14.44□□□□□ -0.1
SQSTM1-203ENST00000422245 LPIN2Q92539 896 aa14.44□□□□□ -0.1
SQSTM1-203ENST00000422245 TEKT1Q969V4 418 aa14.44□□□□□ -0.1
SQSTM1-203ENST00000422245 WNK4Q96J92 1243 aa14.44□□□□□ -0.1
SQSTM1-203ENST00000422245 TDRD3Q9H7E2 651 aaKnown RBP14.44□□□□□ -0.1
SQSTM1-203ENST00000422245 FBXO3Q9UK99 471 aa14.44□□□□□ -0.1
SQSTM1-203ENST00000422245 FZD1Q9UP38 647 aa14.44□□□□□ -0.1
SQSTM1-203ENST00000422245 SUGT1Q9Y2Z0 365 aa14.44□□□□□ -0.1
SQSTM1-203ENST00000422245 OTOFQ9HC10 1997 aa14.43□□□□□ -0.1
SQSTM1-203ENST00000422245 CIAO1O76071 339 aa14.43□□□□□ -0.1
SQSTM1-203ENST00000422245 TBC1D8O95759 1140 aa14.43□□□□□ -0.1
SQSTM1-203ENST00000422245 TNNI2P48788 182 aa14.43□□□□□ -0.1
SQSTM1-203ENST00000422245 BCAMP50895 628 aa14.43□□□□□ -0.1
SQSTM1-203ENST00000422245 MLLT1Q03111 559 aaPredicted RBP14.43□□□□□ -0.1
SQSTM1-203ENST00000422245 PKN2Q16513 984 aaKnown RBP14.43□□□□□ -0.1
SQSTM1-203ENST00000422245 ANKRD13AQ8IZ07 590 aa14.43□□□□□ -0.1
SQSTM1-203ENST00000422245 ZNF296Q8WUU4 475 aaPredicted RBP14.43□□□□□ -0.1
SQSTM1-203ENST00000422245 CLMNQ96JQ2 1002 aa14.43□□□□□ -0.1
SQSTM1-203ENST00000422245 NOB1Q9ULX3 412 aaKnown RBP14.43□□□□□ -0.1
SQSTM1-203ENST00000422245 GPR25O00155 361 aa14.42□□□□□ -0.1
SQSTM1-203ENST00000422245 GRIK5Q16478 980 aa14.42□□□□□ -0.1
SQSTM1-203ENST00000422245 TEPSINQ96N21 525 aa14.42□□□□□ -0.1
SQSTM1-203ENST00000422245 MRIQ9BWK5 157 aa14.42□□□□□ -0.1
SQSTM1-203ENST00000422245 TMOD2Q9NZR1 351 aa14.42□□□□□ -0.1
SQSTM1-203ENST00000422245 TCP10L2B9ZVM9 353 aa14.41□□□□□ -0.1
SQSTM1-203ENST00000422245 RARSP54136 660 aaKnown RBP14.41□□□□□ -0.1
SQSTM1-203ENST00000422245 ATG9AQ7Z3C6 839 aa14.41□□□□□ -0.1
SQSTM1-203ENST00000422245 IFNL1Q8IU54 200 aa14.41□□□□□ -0.1
SQSTM1-203ENST00000422245 ARHGAP45Q92619 1136 aa14.41□□□□□ -0.1
SQSTM1-203ENST00000422245 ZDHHC15Q96MV8 337 aa14.41□□□□□ -0.1
SQSTM1-203ENST00000422245 USP2O75604 605 aaPredicted RBP14.4□□□□□ -0.1
SQSTM1-203ENST00000422245 IL15P40933 162 aaPredicted RBP14.4□□□□□ -0.1
SQSTM1-203ENST00000422245 ATP2B3Q16720 1220 aa14.4□□□□□ -0.1
SQSTM1-203ENST00000422245 FKBP1CQ5VVH2 108 aa14.4□□□□□ -0.1
SQSTM1-203ENST00000422245 WDR66Q8TBY9 1149 aa14.4□□□□□ -0.1
SQSTM1-203ENST00000422245 TMEM39BQ9GZU3 492 aa14.4□□□□□ -0.1
SQSTM1-203ENST00000422245 SIL1Q9H173 461 aa14.4□□□□□ -0.1
SQSTM1-203ENST00000422245 LRRFIP2Q9Y608 721 aaKnown RBP14.4□□□□□ -0.1
SQSTM1-203ENST00000422245 RPAP1Q9BWH6 1393 aaPredicted RBP14.39□□□□□ -0.11
SQSTM1-203ENST00000422245 FKTNO75072 461 aa14.39□□□□□ -0.11
SQSTM1-203ENST00000422245 OTUD7BQ6GQQ9 843 aa14.39□□□□□ -0.11
SQSTM1-203ENST00000422245 HHIPL2Q6UWX4 724 aa14.39□□□□□ -0.11
SQSTM1-203ENST00000422245 CDAN1Q8IWY9 1227 aa14.39□□□□□ -0.11
SQSTM1-203ENST00000422245 HOOK2Q96ED9 719 aa14.39□□□□□ -0.11
SQSTM1-203ENST00000422245 MEIS3Q99687 375 aa14.39□□□□□ -0.11
SQSTM1-203ENST00000422245 GNL3LQ9NVN8 582 aaKnown RBP14.39□□□□□ -0.11
SQSTM1-203ENST00000422245 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.39□□□□□ -0.11
SQSTM1-203ENST00000422245 CEP126Q9P2H0 1117 aa14.39□□□□□ -0.11
SQSTM1-203ENST00000422245 IGF2BP3O00425 579 aaKnown RBP eCLIP14.38□□□□□ -0.11
SQSTM1-203ENST00000422245 GNAI3P08754 354 aa14.38□□□□□ -0.11
SQSTM1-203ENST00000422245 GJA5P36382 358 aa14.38□□□□□ -0.11
SQSTM1-203ENST00000422245 INTS3Q68E01 1043 aaKnown RBP14.38□□□□□ -0.11
SQSTM1-203ENST00000422245 APOBEC3HQ6NTF7 200 aaKnown RBP14.38□□□□□ -0.11
SQSTM1-203ENST00000422245 FAM83AQ86UY5 434 aa14.38□□□□□ -0.11
SQSTM1-203ENST00000422245 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.38□□□□□ -0.11
SQSTM1-203ENST00000422245 OPTNQ96CV9 577 aa14.38□□□□□ -0.11
SQSTM1-203ENST00000422245 ELP3Q9H9T3 547 aa14.38□□□□□ -0.11
SQSTM1-203ENST00000422245 COPRSQ9NQ92 184 aa14.38□□□□□ -0.11
SQSTM1-203ENST00000422245 HPS5Q9UPZ3 1129 aa14.38□□□□□ -0.11
SQSTM1-203ENST00000422245 CSADQ9Y600 493 aa14.38□□□□□ -0.11
SQSTM1-203ENST00000422245 SEMA3EO15041 775 aa14.37□□□□□ -0.11
SQSTM1-203ENST00000422245 ZBTB22O15209 634 aa14.37□□□□□ -0.11
SQSTM1-203ENST00000422245 CACNB3P54284 484 aa14.37□□□□□ -0.11
SQSTM1-203ENST00000422245 VGLL4Q14135 290 aa14.37□□□□□ -0.11
SQSTM1-203ENST00000422245 FBXO46Q6PJ61 603 aaPredicted RBP14.37□□□□□ -0.11
SQSTM1-203ENST00000422245 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.37□□□□□ -0.11
SQSTM1-203ENST00000422245 R3HDMLQ9H3Y0 253 aa14.37□□□□□ -0.11
SQSTM1-203ENST00000422245 SALL1Q9NSC2 1324 aa14.37□□□□□ -0.11
SQSTM1-203ENST00000422245 TESPA1A2RU30 521 aaPredicted RBP14.36□□□□□ -0.11
SQSTM1-203ENST00000422245 IPO8O15397 1037 aaKnown RBP14.36□□□□□ -0.11
SQSTM1-203ENST00000422245 MAP3K9P80192 1104 aa14.36□□□□□ -0.11
SQSTM1-203ENST00000422245 DENND2AQ9ULE3 1009 aa14.36□□□□□ -0.11
SQSTM1-203ENST00000422245 PA2G4Q9UQ80 394 aaKnown RBP14.36□□□□□ -0.11
SQSTM1-203ENST00000422245 SOX10P56693 466 aa14.35□□□□□ -0.11
SQSTM1-203ENST00000422245 MTX1Q13505 466 aa14.35□□□□□ -0.11
SQSTM1-203ENST00000422245 DCAF15Q66K64 600 aa14.35□□□□□ -0.11
SQSTM1-203ENST00000422245 DAGLAQ9Y4D2 1042 aa14.35□□□□□ -0.11
SQSTM1-203ENST00000422245 PDE4DIPQ5VU43 2346 aa14.34□□□□□ -0.11
SQSTM1-203ENST00000422245 SPDYE5A6NIY4 337 aa14.34□□□□□ -0.11
SQSTM1-203ENST00000422245 SRGAP3O43295 1099 aa14.34□□□□□ -0.11
SQSTM1-203ENST00000422245 LDHBP07195 334 aaKnown RBP14.34□□□□□ -0.11
SQSTM1-203ENST00000422245 TRIM27P14373 513 aa14.34□□□□□ -0.11
SQSTM1-203ENST00000422245 PRDX5P30044 214 aa14.34□□□□□ -0.11
SQSTM1-203ENST00000422245 PHKA1P46020 1223 aa14.34□□□□□ -0.11
SQSTM1-203ENST00000422245 GTF2A2P52657 109 aa14.34□□□□□ -0.11
SQSTM1-203ENST00000422245 CRHR2Q13324 411 aa14.34□□□□□ -0.11
SQSTM1-203ENST00000422245 ZGPATQ8N5A5 531 aaKnown RBP14.34□□□□□ -0.11
SQSTM1-203ENST00000422245 ERO1AQ96HE7 468 aa14.34□□□□□ -0.11
SQSTM1-203ENST00000422245 MS4A4AQ96JQ5 239 aa14.34□□□□□ -0.11
SQSTM1-203ENST00000422245 WRNIP1Q96S55 665 aa14.34□□□□□ -0.11
SQSTM1-203ENST00000422245 PDS5AQ29RF7 1337 aaKnown RBP14.34□□□□□ -0.11
SQSTM1-203ENST00000422245 CCL15-CCL14A0A0B4J2E2 113 aa14.33□□□□□ -0.12
SQSTM1-203ENST00000422245 DIXDC1Q155Q3 683 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms