RNA–Protein interactions for RNA: ENST00000419314.5

CCT6P3-201, Transcript of chaperonin containing TCP1 subunit 6 pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CCT6P3, Length 3,702 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT6P3-201ENST00000419314 NTSR2O95665 410 aa16.18■□□□□ 0.18
CCT6P3-201ENST00000419314 PDIA4P13667 645 aaKnown RBP16.18■□□□□ 0.18
CCT6P3-201ENST00000419314 KCPQ6ZWJ8 1503 aa16.17■□□□□ 0.18
CCT6P3-201ENST00000419314 LETM1O95202 739 aaPredicted RBP16.17■□□□□ 0.18
CCT6P3-201ENST00000419314 ADD1P35611 737 aaKnown RBP16.17■□□□□ 0.18
CCT6P3-201ENST00000419314 UBE3CQ15386 1083 aa16.17■□□□□ 0.18
CCT6P3-201ENST00000419314 VPS72Q15906 364 aa16.17■□□□□ 0.18
CCT6P3-201ENST00000419314 TSGA10IPQ3SY00 556 aa16.17■□□□□ 0.18
CCT6P3-201ENST00000419314 IFNL3Q8IZI9 196 aa16.17■□□□□ 0.18
CCT6P3-201ENST00000419314 DENND2AQ9ULE3 1009 aa16.17■□□□□ 0.18
CCT6P3-201ENST00000419314 CCDC192P0DO97 292 aa16.17■□□□□ 0.18
CCT6P3-201ENST00000419314 MAP3K11Q16584 847 aa16.17■□□□□ 0.18
CCT6P3-201ENST00000419314 SEPT12Q8IYM1 358 aa16.17■□□□□ 0.18
CCT6P3-201ENST00000419314 SLC26A6Q9BXS9 759 aa16.17■□□□□ 0.18
CCT6P3-201ENST00000419314 KINO60870 393 aaKnown RBP16.17■□□□□ 0.18
CCT6P3-201ENST00000419314 FAM43AQ8N2R8 423 aa16.17■□□□□ 0.18
CCT6P3-201ENST00000419314 NSUN7Q8NE18 718 aaKnown RBP16.17■□□□□ 0.18
CCT6P3-201ENST00000419314 PHKBQ93100 1093 aa16.17■□□□□ 0.18
CCT6P3-201ENST00000419314 CNBD1Q8NA66 436 aa16.16■□□□□ 0.18
CCT6P3-201ENST00000419314 FTOQ9C0B1 505 aaKnown RBP eCLIP16.16■□□□□ 0.18
CCT6P3-201ENST00000419314 SAFBQ15424 915 aaKnown RBP eCLIP16.16■□□□□ 0.184e-7■■□□□ 12.3
CCT6P3-201ENST00000419314 C3orf67Q6ZVT6 689 aa16.16■□□□□ 0.18
CCT6P3-201ENST00000419314 QTRT2Q9H974 415 aaKnown RBP16.16■□□□□ 0.18
CCT6P3-201ENST00000419314 GJB4Q9NTQ9 266 aa16.16■□□□□ 0.18
CCT6P3-201ENST00000419314 ANGEL1Q9UNK9 670 aaKnown RBP16.16■□□□□ 0.18
CCT6P3-201ENST00000419314 IARSP41252 1262 aaKnown RBP16.16■□□□□ 0.18
CCT6P3-201ENST00000419314 CLEC4GQ6UXB4 293 aa16.16■□□□□ 0.18
CCT6P3-201ENST00000419314 LCORLQ8N3X6 602 aa16.16■□□□□ 0.18
CCT6P3-201ENST00000419314 ARHGEF1Q92888 912 aaKnown RBP16.16■□□□□ 0.18
CCT6P3-201ENST00000419314 ZSCAN16Q9H4T2 348 aaPredicted RBP16.16■□□□□ 0.18
CCT6P3-201ENST00000419314 PATL2C9JE40 543 aaKnown RBP16.15■□□□□ 0.18
CCT6P3-201ENST00000419314 LIG1P18858 919 aa16.15■□□□□ 0.18
CCT6P3-201ENST00000419314 HIBADHP31937 336 aaKnown RBP16.15■□□□□ 0.18
CCT6P3-201ENST00000419314 LEO1Q8WVC0 666 aaPredicted RBP16.15■□□□□ 0.18
CCT6P3-201ENST00000419314 ALG1Q9BT22 464 aa16.15■□□□□ 0.18
CCT6P3-201ENST00000419314 TMX4Q9H1E5 349 aaPredicted RBP16.15■□□□□ 0.18
CCT6P3-201ENST00000419314 AFF2P51816 1311 aa16.15■□□□□ 0.18
CCT6P3-201ENST00000419314 BECN2A8MW95 431 aa16.15■□□□□ 0.18
CCT6P3-201ENST00000419314 C6orf229H3BNL8 230 aa16.15■□□□□ 0.18
CCT6P3-201ENST00000419314 RPS6KA4O75676 772 aa16.15■□□□□ 0.18
CCT6P3-201ENST00000419314 SPC24Q8NBT2 197 aa16.15■□□□□ 0.18
CCT6P3-201ENST00000419314 STRBPQ96SI9 672 aaKnown RBP16.15■□□□□ 0.18
CCT6P3-201ENST00000419314 ABCC6O95255 1503 aa16.15■□□□□ 0.18
CCT6P3-201ENST00000419314 CDKL5O76039 1030 aa16.15■□□□□ 0.18
CCT6P3-201ENST00000419314 TRIM22Q8IYM9 498 aa16.15■□□□□ 0.18
CCT6P3-201ENST00000419314 JCADQ9P266 1359 aa16.14■□□□□ 0.17
CCT6P3-201ENST00000419314 TRIM37O94972 964 aa16.14■□□□□ 0.17
CCT6P3-201ENST00000419314 WTAPQ15007 396 aa16.14■□□□□ 0.17
CCT6P3-201ENST00000419314 TBC1D10CQ8IV04 446 aa16.14■□□□□ 0.17
CCT6P3-201ENST00000419314 CMTR1Q8N1G2 835 aaKnown RBP16.14■□□□□ 0.17
CCT6P3-201ENST00000419314 AATFQ9NY61 560 aaKnown RBP eCLIP16.14■□□□□ 0.17
CCT6P3-201ENST00000419314 MINPP1Q9UNW1 487 aa16.14■□□□□ 0.17
CCT6P3-201ENST00000419314 PARP4Q9UKK3 1724 aaKnown RBP16.14■□□□□ 0.17
CCT6P3-201ENST00000419314 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.14■□□□□ 0.17
CCT6P3-201ENST00000419314 USP5P45974 858 aa16.14■□□□□ 0.17
CCT6P3-201ENST00000419314 CCAR1Q8IX12 1150 aaKnown RBP16.14■□□□□ 0.17
CCT6P3-201ENST00000419314 FSIP1Q8NA03 581 aa16.14■□□□□ 0.17
CCT6P3-201ENST00000419314 LLPHQ9BRT6 129 aaKnown RBP16.14■□□□□ 0.17
CCT6P3-201ENST00000419314 AFDNP55196 1824 aaKnown RBP16.13■□□□□ 0.17
CCT6P3-201ENST00000419314 RFX7Q2KHR2 1363 aa16.13■□□□□ 0.17
CCT6P3-201ENST00000419314 DYNLL1P63167 89 aaKnown RBP16.13■□□□□ 0.17
CCT6P3-201ENST00000419314 ZNF274Q96GC6 653 aaPredicted RBP16.13■□□□□ 0.17
CCT6P3-201ENST00000419314 GJD4Q96KN9 370 aaPredicted RBP16.13■□□□□ 0.17
CCT6P3-201ENST00000419314 GPR101Q96P66 508 aaPredicted RBP16.13■□□□□ 0.17
CCT6P3-201ENST00000419314 RRAGDQ9NQL2 400 aaPredicted RBP16.13■□□□□ 0.17
CCT6P3-201ENST00000419314 ZNF219Q9P2Y4 722 aaPredicted RBP16.13■□□□□ 0.17
CCT6P3-201ENST00000419314 NARFQ9UHQ1 456 aa16.13■□□□□ 0.17
CCT6P3-201ENST00000419314 GOLGA6L19H0YKK7 550 aa16.13■□□□□ 0.17
CCT6P3-201ENST00000419314 HSPA1LP34931 641 aa16.13■□□□□ 0.17
CCT6P3-201ENST00000419314 RNF41Q9H4P4 317 aaPredicted RBP16.13■□□□□ 0.17
CCT6P3-201ENST00000419314 KIAA2012Q0VF49 1180 aa16.12■□□□□ 0.17
CCT6P3-201ENST00000419314 ROBO1Q9Y6N7 1651 aa16.12■□□□□ 0.17
CCT6P3-201ENST00000419314 CYP2D7A0A087X1C5 515 aa16.12■□□□□ 0.17
CCT6P3-201ENST00000419314 MARCKSP29966 332 aaPredicted RBP16.12■□□□□ 0.17
CCT6P3-201ENST00000419314 EXOSC10Q01780 885 aaKnown RBP16.12■□□□□ 0.17
CCT6P3-201ENST00000419314 AMOTL1Q8IY63 956 aa16.12■□□□□ 0.17
CCT6P3-201ENST00000419314 KRT23Q9C075 422 aa16.12■□□□□ 0.17
CCT6P3-201ENST00000419314 ARID4AP29374 1257 aaPredicted RBP16.11■□□□□ 0.17
CCT6P3-201ENST00000419314 SSRP1Q08945 709 aaKnown RBP16.11■□□□□ 0.17
CCT6P3-201ENST00000419314 UBE4AQ14139 1066 aa16.11■□□□□ 0.17
CCT6P3-201ENST00000419314 AKNAD1Q5T1N1 836 aa16.11■□□□□ 0.17
CCT6P3-201ENST00000419314 AIFM3Q96NN9 605 aa16.11■□□□□ 0.17
CCT6P3-201ENST00000419314 VGLL2Q8N8G2 317 aa16.11■□□□□ 0.17
CCT6P3-201ENST00000419314 USP28Q96RU2 1077 aa16.11■□□□□ 0.17
CCT6P3-201ENST00000419314 GNAT2P19087 354 aa16.11■□□□□ 0.17
CCT6P3-201ENST00000419314 CYB5R4Q7L1T6 521 aa16.11■□□□□ 0.17
CCT6P3-201ENST00000419314 IL17RAQ96F46 866 aa16.11■□□□□ 0.17
CCT6P3-201ENST00000419314 TRPC5Q9UL62 973 aaPredicted RBP16.11■□□□□ 0.17
CCT6P3-201ENST00000419314 CNNM2Q9H8M5 875 aa16.1■□□□□ 0.17
CCT6P3-201ENST00000419314 BSDC1Q9NW68 430 aaPredicted RBP16.1■□□□□ 0.17
CCT6P3-201ENST00000419314 DISP2A7MBM2 1401 aa16.1■□□□□ 0.17
CCT6P3-201ENST00000419314 hCG_1642624A0A1W2PR95 340 aa16.1■□□□□ 0.17
CCT6P3-201ENST00000419314 RTN1Q16799 776 aa16.1■□□□□ 0.17
CCT6P3-201ENST00000419314 IQCA1Q86XH1 822 aa16.1■□□□□ 0.17
CCT6P3-201ENST00000419314 ANKRD2Q9GZV1 360 aa16.1■□□□□ 0.17
CCT6P3-201ENST00000419314 ZSWIM5Q9P217 1185 aa16.1■□□□□ 0.17
CCT6P3-201ENST00000419314 RAD21O60216 631 aa16.1■□□□□ 0.17
CCT6P3-201ENST00000419314 SLC3A2P08195 630 aaKnown RBP16.1■□□□□ 0.17
CCT6P3-201ENST00000419314 ESR2Q92731 530 aa16.1■□□□□ 0.17
CCT6P3-201ENST00000419314 ERCC4Q92889 916 aaPredicted RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 123.2 ms