RNA–Protein interactions for RNA: ENST00000416571.5

MDC1-202, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-202ENST00000416571 VPS37DQ86XT2 251 aa12.69□□□□□ -0.38
MDC1-202ENST00000416571 ARMC5Q96C12 935 aa12.69□□□□□ -0.38
MDC1-202ENST00000416571 PTPN18Q99952 460 aa12.69□□□□□ -0.38
MDC1-202ENST00000416571 ZFYVE28Q9HCC9 887 aa12.69□□□□□ -0.38
MDC1-202ENST00000416571 EN2P19622 333 aaPredicted RBP12.68□□□□□ -0.38
MDC1-202ENST00000416571 GYG1P46976 350 aa12.68□□□□□ -0.38
MDC1-202ENST00000416571 EXOSC9Q06265 439 aaKnown RBP12.68□□□□□ -0.38
MDC1-202ENST00000416571 SLC9C1Q4G0N8 1177 aa12.68□□□□□ -0.38
MDC1-202ENST00000416571 NCBP3Q53F19 620 aaKnown RBP12.68□□□□□ -0.38
MDC1-202ENST00000416571 EPHA10Q5JZY3 1008 aa12.68□□□□□ -0.38
MDC1-202ENST00000416571 DZIP1LQ8IYY4 767 aaKnown RBP12.68□□□□□ -0.38
MDC1-202ENST00000416571 TDRD7Q8NHU6 1098 aaKnown RBP12.68□□□□□ -0.38
MDC1-202ENST00000416571 SALL2Q9Y467 1007 aaPredicted RBP12.68□□□□□ -0.38
MDC1-202ENST00000416571 KIAA0100Q14667 2235 aaKnown RBP12.68□□□□□ -0.38
MDC1-202ENST00000416571 FRAT2O75474 233 aaPredicted RBP12.67□□□□□ -0.38
MDC1-202ENST00000416571 CRKP46108 304 aa12.67□□□□□ -0.38
MDC1-202ENST00000416571 MAP3K9P80192 1104 aa12.67□□□□□ -0.38
MDC1-202ENST00000416571 KIF22Q14807 665 aa12.67□□□□□ -0.38
MDC1-202ENST00000416571 SLC4A8Q2Y0W8 1093 aa12.67□□□□□ -0.38
MDC1-202ENST00000416571 CCDC184Q52MB2 194 aa12.67□□□□□ -0.38
MDC1-202ENST00000416571 SLC4A10Q6U841 1118 aa12.67□□□□□ -0.38
MDC1-202ENST00000416571 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.67□□□□□ -0.38
MDC1-202ENST00000416571 OTUD5Q96G74 571 aa12.67□□□□□ -0.38
MDC1-202ENST00000416571 MS4A4AQ96JQ5 239 aa12.67□□□□□ -0.38
MDC1-202ENST00000416571 TMEM39BQ9GZU3 492 aa12.67□□□□□ -0.38
MDC1-202ENST00000416571 COL6A3P12111 3177 aa12.66□□□□□ -0.38
MDC1-202ENST00000416571 ALDH1L1O75891 902 aa12.66□□□□□ -0.38
MDC1-202ENST00000416571 CHAF1AQ13111 956 aaPredicted RBP12.66□□□□□ -0.38
MDC1-202ENST00000416571 VGLL4Q14135 290 aa12.66□□□□□ -0.38
MDC1-202ENST00000416571 WDR63Q8IWG1 891 aa12.66□□□□□ -0.38
MDC1-202ENST00000416571 CNKSR2Q8WXI2 1034 aa12.66□□□□□ -0.38
MDC1-202ENST00000416571 BRI3BPQ8WY22 251 aa12.66□□□□□ -0.38
MDC1-202ENST00000416571 ZNF333Q96JL9 665 aa12.66□□□□□ -0.38
MDC1-202ENST00000416571 FAM84BQ96KN1 310 aaPredicted RBP12.66□□□□□ -0.38
MDC1-202ENST00000416571 TEPSINQ96N21 525 aa12.66□□□□□ -0.38
MDC1-202ENST00000416571 SRCIN1Q9C0H9 1055 aa12.66□□□□□ -0.38
MDC1-202ENST00000416571 TMOD2Q9NZR1 351 aa12.66□□□□□ -0.38
MDC1-202ENST00000416571 PTCH2Q9Y6C5 1203 aa12.66□□□□□ -0.38
MDC1-202ENST00000416571 MROH5Q6ZUA9 1318 aa12.65□□□□□ -0.38
MDC1-202ENST00000416571 CAVIN4Q5BKX8 364 aa12.65□□□□□ -0.38
MDC1-202ENST00000416571 CDAN1Q8IWY9 1227 aa12.65□□□□□ -0.38
MDC1-202ENST00000416571 FAM43AQ8N2R8 423 aa12.65□□□□□ -0.38
MDC1-202ENST00000416571 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.65□□□□□ -0.38
MDC1-202ENST00000416571 TBC1D22AQ8WUA7 517 aa12.65□□□□□ -0.38
MDC1-202ENST00000416571 TEKT1Q969V4 418 aa12.65□□□□□ -0.38
MDC1-202ENST00000416571 HOOK2Q96ED9 719 aa12.65□□□□□ -0.38
MDC1-202ENST00000416571 IQSEC3Q9UPP2 1182 aaPredicted RBP12.65□□□□□ -0.38
MDC1-202ENST00000416571 MKI67P46013 3256 aaKnown RBP12.65□□□□□ -0.38
MDC1-202ENST00000416571 HTTP42858 3142 aa12.65□□□□□ -0.38
MDC1-202ENST00000416571 SPDYE5A6NIY4 337 aa12.64□□□□□ -0.39
MDC1-202ENST00000416571 MYCP01106 439 aaPredicted RBP12.64□□□□□ -0.39
MDC1-202ENST00000416571 CETPP11597 493 aa12.64□□□□□ -0.39
MDC1-202ENST00000416571 ERO1BQ86YB8 467 aa12.64□□□□□ -0.39
MDC1-202ENST00000416571 PUS3Q9BZE2 481 aaKnown RBP12.64□□□□□ -0.39
MDC1-202ENST00000416571 MRS2Q9HD23 443 aa12.64□□□□□ -0.39
MDC1-202ENST00000416571 CACNB3P54284 484 aa12.63□□□□□ -0.39
MDC1-202ENST00000416571 HDLBPQ00341 1268 aaKnown RBP12.63□□□□□ -0.39
MDC1-202ENST00000416571 CAP1Q01518 475 aa12.63□□□□□ -0.39
MDC1-202ENST00000416571 SNAPC2Q13487 334 aa12.63□□□□□ -0.39
MDC1-202ENST00000416571 METTL24Q5JXM2 366 aa12.63□□□□□ -0.39
MDC1-202ENST00000416571 DCAF15Q66K64 600 aa12.63□□□□□ -0.39
MDC1-202ENST00000416571 SUCLG2Q96I99 432 aa12.63□□□□□ -0.39
MDC1-202ENST00000416571 WRNIP1Q96S55 665 aa12.63□□□□□ -0.39
MDC1-202ENST00000416571 CENPFP49454 3210 aa12.63□□□□□ -0.39
MDC1-202ENST00000416571 MAST3O60307 1309 aa12.62□□□□□ -0.39
MDC1-202ENST00000416571 TLR2O60603 784 aa12.62□□□□□ -0.39
MDC1-202ENST00000416571 GNRH1P01148 92 aa12.62□□□□□ -0.39
MDC1-202ENST00000416571 ZCCHC17Q9NP64 241 aaKnown RBP12.62□□□□□ -0.39
MDC1-202ENST00000416571 RIPOR2Q9Y4F9 1068 aa12.62□□□□□ -0.39
MDC1-202ENST00000416571 SNCAIPQ9Y6H5 919 aa12.62□□□□□ -0.39
MDC1-202ENST00000416571 MYH13Q9UKX3 1938 aa12.61□□□□□ -0.39
MDC1-202ENST00000416571 ZSWIM8A7E2V4 1837 aa12.61□□□□□ -0.39
MDC1-202ENST00000416571 PRMT2P55345 433 aa12.61□□□□□ -0.39
MDC1-202ENST00000416571 LACTBP83111 547 aaPredicted RBP12.61□□□□□ -0.39
MDC1-202ENST00000416571 PPIL2Q13356 520 aa12.61□□□□□ -0.39
MDC1-202ENST00000416571 GRIK5Q16478 980 aa12.61□□□□□ -0.39
MDC1-202ENST00000416571 FBXO33Q7Z6M2 555 aa12.61□□□□□ -0.39
MDC1-202ENST00000416571 FAM83AQ86UY5 434 aa12.61□□□□□ -0.39
MDC1-202ENST00000416571 SH3TC2Q8TF17 1288 aa12.61□□□□□ -0.39
MDC1-202ENST00000416571 ZKSCAN4Q969J2 545 aaPredicted RBP12.61□□□□□ -0.39
MDC1-202ENST00000416571 BTBD19C9JJ37 291 aa12.6□□□□□ -0.39
MDC1-202ENST00000416571 IRF6O14896 467 aa12.6□□□□□ -0.39
MDC1-202ENST00000416571 ECM2O94769 699 aaPredicted RBP12.6□□□□□ -0.39
MDC1-202ENST00000416571 NBPF7P0C2Y1 421 aaPredicted RBP12.6□□□□□ -0.39
MDC1-202ENST00000416571 ZEB1P37275 1124 aaPredicted RBP12.6□□□□□ -0.39
MDC1-202ENST00000416571 FKBP1CQ5VVH2 108 aa12.6□□□□□ -0.39
MDC1-202ENST00000416571 ZDHHC15Q96MV8 337 aa12.6□□□□□ -0.39
MDC1-202ENST00000416571 ARHGAP39Q9C0H5 1083 aa12.6□□□□□ -0.39
MDC1-202ENST00000416571 BICC1Q9H694 974 aaKnown RBP12.6□□□□□ -0.39
MDC1-202ENST00000416571 COLQQ9Y215 455 aaPredicted RBP12.6□□□□□ -0.39
MDC1-202ENST00000416571 SUGT1Q9Y2Z0 365 aa12.6□□□□□ -0.39
MDC1-202ENST00000416571 AK9Q5TCS8 1911 aa12.6□□□□□ -0.39
MDC1-202ENST00000416571 RPAP1Q9BWH6 1393 aaPredicted RBP12.59□□□□□ -0.39
MDC1-202ENST00000416571 PDE8BO95263 885 aa12.59□□□□□ -0.39
MDC1-202ENST00000416571 IFIT1P09914 478 aaKnown RBP12.59□□□□□ -0.39
MDC1-202ENST00000416571 PPATQ06203 517 aa12.59□□□□□ -0.39
MDC1-202ENST00000416571 LRRC24Q50LG9 513 aa12.59□□□□□ -0.39
MDC1-202ENST00000416571 KAZALD1Q96I82 304 aa12.59□□□□□ -0.39
MDC1-202ENST00000416571 MRIQ9BWK5 157 aa12.59□□□□□ -0.39
MDC1-202ENST00000416571 ZNF341Q9BYN7 854 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms